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FFCP PHASE1:Mm9::chr1:155756359..155756371,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:155756359..155756371,+|id=chr1:155756359..155756371,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,3.63e-09,23;CL:0000337,3.63e-09,23;CL:0002614,6.65e-09,3;CL:0002610,1.12e-08,3;CL:0000540,6.21e-07,33;CL:0000047,6.21e-07,33;CL:0000031,6.21e-07,33;CL:0000404,6.21e-07,33;CL:0002319,6.54e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!9.39e-10!114;UBERON:0001049!1.05e-09!52;UBERON:0005068!1.05e-09!52;UBERON:0006241!1.05e-09!52;UBERON:0007135!1.05e-09!52;UBERON:0004111!1.72e-09!122;UBERON:0000955!4.14e-09!50;UBERON:0006238!4.14e-09!50;UBERON:0000033!5.11e-09!63;UBERON:0001017!1.15e-08!73;UBERON:0005743!1.15e-08!73;UBERON:0002346!1.17e-08!71;UBERON:0003075!1.17e-08!71;UBERON:0007284!1.17e-08!71;UBERON:0002616!1.21e-08!49;UBERON:0000073!1.69e-08!75;UBERON:0001016!1.69e-08!75;UBERON:0004121!1.43e-07!102;UBERON:0000924!1.43e-07!102;UBERON:0006601!1.43e-07!102;UBERON:0003076!7.30e-07!12;UBERON:0003057!7.30e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.04e-15,54;UBERON:0001017,1.42e-13,73;UBERON:0001016,4.63e-13,75;UBERON:0003076,2.47e-11,12;UBERON:0003057,2.47e-11,12;UBERON:0004121,3.40e-11,95;UBERON:0000924,3.40e-11,95;UBERON:0006601,3.40e-11,95;UBERON:0001049,6.02e-11,52;UBERON:0005068,6.02e-11,52;UBERON:0006241,6.02e-11,52;UBERON:0007135,6.02e-11,52;UBERON:0002020,1.78e-09,34;UBERON:0002346,3.88e-09,64;UBERON:0003075,3.88e-09,64;UBERON:0007284,3.88e-09,64;UBERON:0002038,6.65e-09,3;UBERON:0009663,6.65e-09,3;UBERON:0009661,6.65e-09,3;UBERON:0000125,6.65e-09,3;UBERON:0002308,6.65e-09,3;UBERON:0004684,1.12e-08,3;UBERON:0002275,1.12e-08,3;UBERON:0010371,2.00e-08,73;UBERON:0000955,2.73e-08,47;UBERON:0006238,2.73e-08,47;UBERON:0002021,2.79e-08,10;UBERON:0000411,2.79e-08,10;UBERON:0001950,2.79e-08,10;UBERON:0000025,2.91e-08,114;UBERON:0004111,4.05e-08,122;UBERON:0001948,1.33e-07,5;UBERON:0002315,1.33e-07,5;UBERON:0002616,2.31e-07,46;UBERON:0002950,9.68e-07,4;UBERON:0001891,9.68e-07,4;UBERON:0009616,9.68e-07,4;UBERON:0010286,9.68e-07,4|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0.42438965179803,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.816677425049476,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0,0,3.12956537739216,0.436050312760893,0.878744730937887,0.388859798148567,0.419959264876088,0,0.503347818173209,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,0.768436610643109,0.311068836925433,0,0,3.14216082844184,2.20868540951614,0,0,0,3.30347642998166,3.83062014255563,3.99376986466233,0,0.457438218012048,0,6.97957497503452,11.8180148106653,3.36156145108982,1.17851434189467,1.13897344639282,0.745597783301202,0.151452386666368,0.226714680320357,0.579728977403356,0,0.679971333707751,1.61910957491345,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,1.82694207550496,0,0.445326417194474,0.867426633830679,0,0.461230994512117,0.452167921657868,0,0.628332956648377,1.97755974187499,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,1.46612694769419,0,0.479260498023681,0,0.254140454146129,0.898743836428936,0.457500602818626,0.251308704225729,0.521472960576829,1.79000820131231,1.0389402227978,0.973447578406546,0.81471491080253,1.36847667671102,1.51633655060205,0.631325567659422,0.130120442962704,0,0.180062129805349,0.753524089178575,0.136072998302656,0.512454881139399,0.281105173679186,1.03481348295606,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.583826711835847,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.439100230582101,1.20785776884335,0.420579897128254,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0.784993639206874,0.987177311374404,0.889357881261447,0.166845105716094,0,0.449724224769707,0,0,0,0.287696137450811,1.62135226775035,1.64736847912849,5.75072826109418,0.744281895337007,0.936113019343682,0.505157755894224,1.07638448113147,0.964887042726734,0.184753190166605,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0.238043640886014,0.585400943573396,0,0,0.318909537314974,0.655453258862952,0.345369963731791,0.723245292907558,1.50791283939272,1.08781136763742,0,0.551873492609465,1.28440471990234,2.93029216480508,0,0.757412781613119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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=313
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr1:155756359..155756371,+
|description=CAGE_peak_at_chr1:155756359..155756371,+
|id=chr1:155756359..155756371,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,3.63e-09,23;CL:0000337,3.63e-09,23;CL:0002614,6.65e-09,3;CL:0002610,1.12e-08,3;CL:0000540,6.21e-07,33;CL:0000047,6.21e-07,33;CL:0000031,6.21e-07,33;CL:0000404,6.21e-07,33;CL:0002319,6.54e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!9.39e-10!114;UBERON:0001049!1.05e-09!52;UBERON:0005068!1.05e-09!52;UBERON:0006241!1.05e-09!52;UBERON:0007135!1.05e-09!52;UBERON:0004111!1.72e-09!122;UBERON:0000955!4.14e-09!50;UBERON:0006238!4.14e-09!50;UBERON:0000033!5.11e-09!63;UBERON:0001017!1.15e-08!73;UBERON:0005743!1.15e-08!73;UBERON:0002346!1.17e-08!71;UBERON:0003075!1.17e-08!71;UBERON:0007284!1.17e-08!71;UBERON:0002616!1.21e-08!49;UBERON:0000073!1.69e-08!75;UBERON:0001016!1.69e-08!75;UBERON:0004121!1.43e-07!102;UBERON:0000924!1.43e-07!102;UBERON:0006601!1.43e-07!102;UBERON:0003076!7.30e-07!12;UBERON:0003057!7.30e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.04e-15,54;UBERON:0001017,1.42e-13,73;UBERON:0001016,4.63e-13,75;UBERON:0003076,2.47e-11,12;UBERON:0003057,2.47e-11,12;UBERON:0004121,3.40e-11,95;UBERON:0000924,3.40e-11,95;UBERON:0006601,3.40e-11,95;UBERON:0001049,6.02e-11,52;UBERON:0005068,6.02e-11,52;UBERON:0006241,6.02e-11,52;UBERON:0007135,6.02e-11,52;UBERON:0002020,1.78e-09,34;UBERON:0002346,3.88e-09,64;UBERON:0003075,3.88e-09,64;UBERON:0007284,3.88e-09,64;UBERON:0002038,6.65e-09,3;UBERON:0009663,6.65e-09,3;UBERON:0009661,6.65e-09,3;UBERON:0000125,6.65e-09,3;UBERON:0002308,6.65e-09,3;UBERON:0004684,1.12e-08,3;UBERON:0002275,1.12e-08,3;UBERON:0010371,2.00e-08,73;UBERON:0000955,2.73e-08,47;UBERON:0006238,2.73e-08,47;UBERON:0002021,2.79e-08,10;UBERON:0000411,2.79e-08,10;UBERON:0001950,2.79e-08,10;UBERON:0000025,2.91e-08,114;UBERON:0004111,4.05e-08,122;UBERON:0001948,1.33e-07,5;UBERON:0002315,1.33e-07,5;UBERON:0002616,2.31e-07,46;UBERON:0002950,9.68e-07,4;UBERON:0001891,9.68e-07,4;UBERON:0009616,9.68e-07,4;UBERON:0010286,9.68e-07,4
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0.42438965179803,0.935476191661768,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.816677425049476,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0,0,3.12956537739216,0.436050312760893,0.878744730937887,0.388859798148567,0.419959264876088,0,0.503347818173209,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.19840044207362,0.768436610643109,0.311068836925433,0,0,3.14216082844184,2.20868540951614,0,0,0,3.30347642998166,3.83062014255563,3.99376986466233,0,0.457438218012048,0,6.97957497503452,11.8180148106653,3.36156145108982,1.17851434189467,1.13897344639282,0.745597783301202,0.151452386666368,0.226714680320357,0.579728977403356,0,0.679971333707751,1.61910957491345,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,1.82694207550496,0,0.445326417194474,0.867426633830679,0,0.461230994512117,0.452167921657868,0,0.628332956648377,1.97755974187499,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,1.46612694769419,0,0.479260498023681,0,0.254140454146129,0.898743836428936,0.457500602818626,0.251308704225729,0.521472960576829,1.79000820131231,1.0389402227978,0.973447578406546,0.81471491080253,1.36847667671102,1.51633655060205,0.631325567659422,0.130120442962704,0,0.180062129805349,0.753524089178575,0.136072998302656,0.512454881139399,0.281105173679186,1.03481348295606,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.583826711835847,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.439100230582101,1.20785776884335,0.420579897128254,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0.784993639206874,0.987177311374404,0.889357881261447,0.166845105716094,0,0.449724224769707,0,0,0,0.287696137450811,1.62135226775035,1.64736847912849,5.75072826109418,0.744281895337007,0.936113019343682,0.505157755894224,1.07638448113147,0.964887042726734,0.184753190166605,0.189491411770485,0,0.339490171550376,0.469380496577004,0,0.238043640886014,0.585400943573396,0,0,0.318909537314974,0.655453258862952,0.345369963731791,0.723245292907558,1.50791283939272,1.08781136763742,0,0.551873492609465,1.28440471990234,2.93029216480508,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,1.28528526568723,0.141940085208269,0.712262414669021,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0,0.388076051348264,0.214337035031592,0.177340233642274,0.713475270408282,0.822745103010605,0.913394847343798,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0.927126510052548,0,0,0.740778109478847,0.376736914009382,0,0.228778173206523,0.679913719975421,0.839708713941948,0.829199842826543,2.86401185404534,0,0,0.540026704109006,0.209088296014469,0.436725127492355,0.134864346384821,0.330613822901344,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.168956125490778,0.704143431874524,0.5208175393758,0.419437377702843,0.724752362478018,0.576060012515731,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.288635524920988,0.350630706544707,0,0,0.179427713218951,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0.564751842617067,1.38097570952153,0.572895513439397,4.98374228796694,0,3.0215755895588,2.02506750069542,0.45032120322422,1.81256963593682,1.55328093525546,0.415149390336707,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.953744759789284,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.679020569229309,0,0.237270036248348,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421
|short_description=p@chr1:155756359..155756371,+
}}

Latest revision as of 00:58, 5 August 2015

Short description:p@chr1:155756359..155756371, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:155756359..155756371, +
Coexpression cluster:MCL_coexpression_mm9:313
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr1:155756359..155756371+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.63e-0923
neuroblast (sensu Vertebrata)3.63e-0923
neuron of the substantia nigra6.65e-093
raphe nuclei neuron1.12e-083
neuron6.21e-0733
neuronal stem cell6.21e-0733
neuroblast6.21e-0733
electrically signaling cell6.21e-0733
neural cell6.54e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.04e-1554
central nervous system1.42e-1373
nervous system4.63e-1375
posterior neural tube2.47e-1112
chordal neural plate2.47e-1112
ectoderm-derived structure3.40e-1195
ectoderm3.40e-1195
presumptive ectoderm3.40e-1195
neural tube6.02e-1152
neural rod6.02e-1152
future spinal cord6.02e-1152
neural keel6.02e-1152
gray matter1.78e-0934
neurectoderm3.88e-0964
neural plate3.88e-0964
presumptive neural plate3.88e-0964
substantia nigra6.65e-093
telencephalic nucleus6.65e-093
midbrain nucleus6.65e-093
neural nucleus6.65e-093
nucleus of brain6.65e-093
raphe nuclei1.12e-083
reticular formation1.12e-083
ecto-epithelium2.00e-0873
brain2.73e-0847
future brain2.73e-0847
occipital lobe2.79e-0810
visual cortex2.79e-0810
neocortex2.79e-0810
tube2.91e-08114
anatomical conduit4.05e-08122
regional part of spinal cord1.33e-075
gray matter of spinal cord1.33e-075
regional part of brain2.31e-0746
regional part of midbrain9.68e-074
midbrain9.68e-074
presumptive midbrain9.68e-074
midbrain neural tube9.68e-074
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