FFCP PHASE1:Hg19::chrX:67913471..67913495,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:67913471..67913495,+
|short_description=p1@STARD8
|description=CAGE_peak_1_at_STARD8_5end
|association_with_transcript=0bp_to_ENST00000374597,NM_001142504,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9754 | |EntrezGene=9754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19161 | |HGNC=19161 | ||
|TSSclassifier=strong | |||
|UniProt=Q92502 | |UniProt=Q92502 | ||
|association_with_transcript=0bp_to_ENST00000374597,NM_001142504,uc004dxc.3_5end | |||
|cluster_id=chrX:67913471..67913495,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_STARD8_5end | |||
|id=chrX:67913471..67913495,+ | |||
|ontology_enrichment_celltype=CL:0000763!8.33e-39!112;CL:0000049!8.33e-39!112;CL:0000557!8.41e-29!71;CL:0000766!1.28e-28!76;CL:0000839!4.18e-27!70;CL:0002009!4.56e-27!65;CL:0002057!8.27e-27!42;CL:0002194!1.87e-26!63;CL:0000576!1.87e-26!63;CL:0000040!1.87e-26!63;CL:0000559!1.87e-26!63;CL:0000860!1.82e-22!45;CL:0000988!1.20e-15!182;CL:0000037!3.32e-15!172;CL:0000566!3.32e-15!172;CL:0002032!1.26e-14!165;CL:0000837!1.26e-14!165;CL:0000738!1.98e-08!140;CL:0000115!2.05e-08!35;CL:0002139!5.81e-07!24;CL:0002031!7.50e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.41e-21;33!CL:0002057;2.41e-21;33!CL:0000473;1.69e-20;39!CL:0000234;1.69e-20;39!CL:0000576;3.43e-19;48!CL:0000766;2.37e-15;69!CL:0000763;2.85e-14;100!CL:0000115;7.45e-08;36!CL:0002139;2.68e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.36e-45,108;CL:0000049,2.36e-45,108;CL:0000557,4.72e-35,67;CL:0000766,1.29e-34,72;CL:0002009,2.59e-33,61;CL:0000839,4.14e-33,66;CL:0002194,1.07e-32,59;CL:0000576,1.07e-32,59;CL:0000040,1.07e-32,59;CL:0000559,1.07e-32,59;CL:0000473,2.20e-31,48;CL:0000234,2.20e-31,48;CL:0000860,2.66e-28,42;CL:0002057,2.66e-28,42;CL:0000988,2.03e-18,177;CL:0000037,4.62e-18,168;CL:0002032,2.47e-17,161;CL:0000837,2.47e-17,161;CL:0000738,2.46e-10,136;CL:0000115,4.88e-09,36;CL:0002031,2.12e-08,120;CL:0002087,1.59e-07,115;CL:0002139,2.78e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-20;42!CL:0000049;4.20e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!3.77e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.51e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.11e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0003081!1.41e-28!216;UBERON:0002193!2.41e-28!112;UBERON:0002390!1.93e-27!102;UBERON:0003061!1.93e-27!102;UBERON:0002371!5.64e-27!80;UBERON:0007023!1.30e-24!115;UBERON:0001474!1.38e-23!86;UBERON:0002405!1.28e-22!115;UBERON:0004765!7.35e-17!101;UBERON:0001434!7.35e-17!101;UBERON:0002204!5.29e-13!167;UBERON:0001049!3.06e-09!57;UBERON:0005068!3.06e-09!57;UBERON:0006241!3.06e-09!57;UBERON:0007135!3.06e-09!57;UBERON:0000025!5.30e-08!194;UBERON:0001009!1.05e-07!113;UBERON:0002616!2.75e-07!59;UBERON:0004535!5.12e-07!110;UBERON:0003080!6.43e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.92e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.03e-33,108;UBERON:0002371,3.53e-32,76;UBERON:0002390,5.19e-32,98;UBERON:0003061,5.19e-32,98;UBERON:0002405,4.63e-31,93;UBERON:0003081,4.68e-30,203;UBERON:0001474,4.03e-28,82;UBERON:0007023,2.40e-25,114;UBERON:0004765,9.76e-23,90;UBERON:0001434,1.54e-17,100;UBERON:0000926,3.13e-14,315;UBERON:0004120,3.13e-14,315;UBERON:0006603,3.13e-14,315;UBERON:0002204,1.45e-11,167;UBERON:0001049,9.13e-09,56;UBERON:0005068,9.13e-09,56;UBERON:0006241,9.13e-09,56;UBERON:0007135,9.13e-09,56;UBERON:0000025,5.45e-08,192;UBERON:0000073,5.76e-08,53;UBERON:0002616,5.76e-08,53;UBERON:0001009,2.67e-07,112;UBERON:0000479,4.85e-07,773 | |||
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| ||
|short_description=p1@STARD8 | |||
}} | }} |
Latest revision as of 05:36, 16 September 2015
Short description: | p1@STARD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STARD8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000374597, NM_001142504, uc004dxc.3_5end |
EntrezGene: | STARD8 |
HGNC: | 19161 |
UniProt: | Q92502 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.36e-45 | 108 |
common myeloid progenitor | 2.36e-45 | 108 |
granulocyte monocyte progenitor cell | 4.72e-35 | 67 |
myeloid leukocyte | 1.29e-34 | 72 |
macrophage dendritic cell progenitor | 2.59e-33 | 61 |
myeloid lineage restricted progenitor cell | 4.14e-33 | 66 |
monopoietic cell | 1.07e-32 | 59 |
monocyte | 1.07e-32 | 59 |
monoblast | 1.07e-32 | 59 |
promonocyte | 1.07e-32 | 59 |
defensive cell | 2.20e-31 | 48 |
phagocyte | 2.20e-31 | 48 |
classical monocyte | 2.66e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-28 | 42 |
hematopoietic cell | 2.03e-18 | 177 |
hematopoietic stem cell | 4.62e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.47e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.47e-17 | 161 |
leukocyte | 2.46e-10 | 136 |
endothelial cell | 4.88e-09 | 36 |
hematopoietic lineage restricted progenitor cell | 2.12e-08 | 120 |
nongranular leukocyte | 1.59e-07 | 115 |
endothelial cell of vascular tree | 2.78e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.03e-33 | 108 |
bone marrow | 3.53e-32 | 76 |
hematopoietic system | 5.19e-32 | 98 |
blood island | 5.19e-32 | 98 |
immune system | 4.63e-31 | 93 |
lateral plate mesoderm | 4.68e-30 | 203 |
bone element | 4.03e-28 | 82 |
adult organism | 2.40e-25 | 114 |
skeletal element | 9.76e-23 | 90 |
skeletal system | 1.54e-17 | 100 |
mesoderm | 3.13e-14 | 315 |
mesoderm-derived structure | 3.13e-14 | 315 |
presumptive mesoderm | 3.13e-14 | 315 |
musculoskeletal system | 1.45e-11 | 167 |
neural tube | 9.13e-09 | 56 |
neural rod | 9.13e-09 | 56 |
future spinal cord | 9.13e-09 | 56 |
neural keel | 9.13e-09 | 56 |
tube | 5.45e-08 | 192 |
regional part of nervous system | 5.76e-08 | 53 |
regional part of brain | 5.76e-08 | 53 |
circulatory system | 2.67e-07 | 112 |
tissue | 4.85e-07 | 773 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.11e-10 | 31 |