FFCP PHASE1:Hg19::chr6:144607662..144607680,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7402 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12635 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPZ4,A8K8Z1 | |||
|association_with_transcript=172bp_to_ENST00000367529,uc010khq.1_5end | |||
|cluster_id=chr6:144607662..144607680,+ | |||
|description=CAGE_peak_16_at_UTRN_5end | |||
|id=chr6:144607662..144607680,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-21!115;UBERON:0001049!1.58e-10!57;UBERON:0005068!1.58e-10!57;UBERON:0006241!1.58e-10!57;UBERON:0007135!1.58e-10!57;UBERON:0000475!8.97e-10!365;UBERON:0000062!1.11e-09!511;UBERON:0000153!2.33e-09!129;UBERON:0007811!2.33e-09!129;UBERON:0003075!3.80e-09!86;UBERON:0007284!3.80e-09!86;UBERON:0000033!8.16e-09!123;UBERON:0005743!1.10e-08!86;UBERON:0002346!1.80e-08!90;UBERON:0003080!1.87e-08!42;UBERON:0002780!4.11e-08!41;UBERON:0001890!4.11e-08!41;UBERON:0006240!4.11e-08!41;UBERON:0000955!5.31e-08!69;UBERON:0006238!5.31e-08!69;UBERON:0001017!5.57e-08!82;UBERON:0002616!7.19e-08!59;UBERON:0000073!1.19e-07!94;UBERON:0001016!1.19e-07!94;UBERON:0004111!1.70e-07!241;UBERON:0000477!2.53e-07!286;UBERON:0000468!9.32e-07!659;UBERON:0000467!9.84e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.29e-13;6!UBERON:0002784;2.22e-10;4!UBERON:0005904;3.13e-09;4!UBERON:0001894;6.58e-09;7!UBERON:0000125;5.00e-08;9!UBERON:0002308;5.00e-08;9!UBERON:0000988;1.96e-07;3!UBERON:0001896;1.96e-07;3!UBERON:0006947;1.96e-07;3!UBERON:0005290;1.96e-07;3!UBERON:0004054;1.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.71e-21,114;UBERON:0002298,2.15e-13,6;UBERON:0002784,2.96e-10,4;UBERON:0001049,9.60e-10,56;UBERON:0005068,9.60e-10,56;UBERON:0006241,9.60e-10,56;UBERON:0007135,9.60e-10,56;UBERON:0005904,1.09e-09,4;UBERON:0001894,8.20e-09,7;UBERON:0006222,8.20e-09,7;UBERON:0003076,1.46e-08,15;UBERON:0003057,1.46e-08,15;UBERON:0000125,1.54e-08,9;UBERON:0002308,1.54e-08,9;UBERON:0000073,4.08e-08,53;UBERON:0002616,4.08e-08,53;UBERON:0003075,8.55e-08,82;UBERON:0007284,8.55e-08,82;UBERON:0006947,9.49e-08,3;UBERON:0004054,9.49e-08,3;UBERON:0010314,1.03e-07,132;UBERON:0000988,1.28e-07,3;UBERON:0001896,1.95e-07,3;UBERON:0005290,1.95e-07,3;UBERON:0010096,1.95e-07,3;UBERON:0004111,2.45e-07,240;UBERON:0002346,3.43e-07,86;UBERON:0001017,9.34e-07,81 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.704772020479856,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0.639312809217652,0,1.00267582127178,0.289693037921647,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0.327447688744282,0,0,0,0.174129737299267,0,1.90792499444274,0.571994910780128,1.85728750664782,0,0,0,0.56530794192401,0,0.275118041940067,0.626984899610432,1.29208379584664,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0,0.982297011124877,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0.496971951695318,0.633152558322899,1.05927344650575,1.14734648299525,0,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.490385709340376,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.421352420106746,0.816616685019573,0.245668634623536,0.516628905878827,1.18800285728205,0,0,0,0.336672227908132,0,0.831192346452549,1.75591048352335,0.30648779579902,0.300476117813194,0.113432183160021,2.51145489964407,0.85422955527427,0,0.900273288253207,0.309157587715317,2.06112432036503,0.37223371266318,1.68776332241266,0.487185025805993,2.01947019395292,0.552299391853796,0.80823028409406,2.4850671476163,0.806016785821122,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,0.492663237895943,0.528290604079356,1.4512968087854,0.864719720501769,0.88369703398466,0.190493682876507,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.771622122786426,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0.985153801009636,0.215627574859517,0.128343036279748,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.178428988797162,0.315404830067869,0.468565659970853,0.601892199455438,0,0,0,0.184369168541703,0.521301686808497,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0.992431231275107,2.455391572609,0.841980283299221,1.02511319404561,2.04682899626681,0,0,0,0,0.0821271560138091,1.03850885836724,0,0.120859449591622,0,0,0.459257792658427,0,0,0,0.539107359730903,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0.976135183992909,0.721287081534056,1.73981983154852,2.14524699793529,0.574265537996172,0,1.6068392984416,0.096670718292122,0,0,0.413509717453592,0.322260734604821,0.435050081742686,0,0,0,0.192190067365106,0.765676274967505,0.10115778085555,0,1.5740617341532,0,0,1.06461206063404,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0.573645408816206,0,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,1.1490322207942,0.211673582723883,0,0.842391534340376,0,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0.33307196799782,0,0,1.31857361344705,0.606802608747567,0,0.284136146806413,0,0,0,0.994147647766298,0.984685914873589,0.111308705022906,0,0,0.996239941255349,0.552567831062295,0,1.53403023753232,0,0.622079175323615,0.269605053441981,0,0,1.08507746200627,0,1.11136990144637,0,0.834912883456661,0,0,0,0.724999575434793,0,0,0,0,0,0.868124974666461,1.77148277162768,0.723578631752448,0,0.331737779793674,0.591095237907095,0.438770794307945,1.0893846351899,0,1.61595542857974,0.113942055847001,0,0,0,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0.649165919226273,0.995261931078505,0.442287822516696,0.611030144933625,0,0,0,0.471807930864739,4.81546588379273,0.234264445725339,0,0,0,1.57833761139756,0,0,0.821425535170343,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,1.19472429772959,0,0.138674673013139,0,0.195984794828755,0,1.57254001417827,0.51595809741485,0,0.0730893170861856,0.246346371159628,0.678923115418936,0,0.90392296312213,0.411125773940253,0,0.50648636764703,0,2.32460578729448,0.213452994739353,0.19980960958213,0.144090417154106,0.687219576995494,0.514784993585894,0.288109595976299,0.86976774895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| |||
|short_description=p16@UTRN | |||
}} |
Latest revision as of 21:40, 15 September 2015
Short description: | p16@UTRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_UTRN_5end |
Coexpression cluster: | NA |
Association with transcript: | 172bp_to_ENST00000367529, uc010khq.1_5end |
EntrezGene: | UTRN |
HGNC: | 12635 |
UniProt: | E7EPZ4A8K8Z1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.71e-21 | 114 |
brainstem | 2.15e-13 | 6 |
regional part of diencephalon | 2.96e-10 | 4 |
neural tube | 9.60e-10 | 56 |
neural rod | 9.60e-10 | 56 |
future spinal cord | 9.60e-10 | 56 |
neural keel | 9.60e-10 | 56 |
duct of male reproductive system | 1.09e-09 | 4 |
diencephalon | 8.20e-09 | 7 |
future diencephalon | 8.20e-09 | 7 |
posterior neural tube | 1.46e-08 | 15 |
chordal neural plate | 1.46e-08 | 15 |
neural nucleus | 1.54e-08 | 9 |
nucleus of brain | 1.54e-08 | 9 |
regional part of nervous system | 4.08e-08 | 53 |
regional part of brain | 4.08e-08 | 53 |
neural plate | 8.55e-08 | 82 |
presumptive neural plate | 8.55e-08 | 82 |
male genital duct | 9.49e-08 | 3 |
internal male genitalia | 9.49e-08 | 3 |
structure with developmental contribution from neural crest | 1.03e-07 | 132 |
pons | 1.28e-07 | 3 |
medulla oblongata | 1.95e-07 | 3 |
myelencephalon | 1.95e-07 | 3 |
future myelencephalon | 1.95e-07 | 3 |
anatomical conduit | 2.45e-07 | 240 |
neurectoderm | 3.43e-07 | 86 |
central nervous system | 9.34e-07 | 81 |