FFCP PHASE1:Hg19::chr6:131521120..131521152,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9465 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=377 | |||
|TSSclassifier=strong | |||
|UniProt=F5H4P9 | |||
|association_with_transcript=0bp_to_ENST00000537868_5end | |||
|cluster_id=chr6:131521120..131521152,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_AKAP7_5end | |||
|id=chr6:131521120..131521152,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.97e-36!53;CL:0000051!4.97e-36!53;CL:0000838!2.99e-35!52;CL:0000084!1.63e-25!25;CL:0000827!1.63e-25!25;CL:0000791!3.44e-24!18;CL:0000789!3.44e-24!18;CL:0002420!3.44e-24!18;CL:0002419!3.44e-24!18;CL:0000790!3.44e-24!18;CL:0000037!1.80e-23!172;CL:0000566!1.80e-23!172;CL:0000988!6.88e-21!182;CL:0000738!8.71e-21!140;CL:0002032!1.50e-20!165;CL:0000837!1.50e-20!165;CL:0002087!7.53e-18!119;CL:0000625!8.00e-16!11;CL:0000236!2.50e-15!14;CL:0002031!3.72e-15!124;CL:0000945!1.91e-09!24;CL:0000826!1.91e-09!24;CL:0000624!4.59e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.04e-39;18!CL:0000789;5.04e-39;18!CL:0002419;5.04e-39;18!CL:0000084;1.18e-32;25!CL:0000625;3.99e-25;11!CL:0000542;7.60e-24;53!CL:0000236;1.17e-17;13!CL:0000624;5.24e-14;6!CL:0000945;1.98e-08;24!CL:0000898;3.42e-08;3!CL:0002087;2.16e-07;104!CL:0000226;2.57e-07;3!CL:0000842;2.57e-07;3!CL:0000623;2.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.76e-41,52;CL:0000542,4.47e-40,53;CL:0000051,4.47e-40,53;CL:0000791,4.83e-39,18;CL:0000789,4.83e-39,18;CL:0002420,4.83e-39,18;CL:0002419,4.83e-39,18;CL:0000790,4.83e-39,18;CL:0000084,1.07e-32,25;CL:0000827,1.07e-32,25;CL:0000625,3.78e-25,11;CL:0000037,7.50e-21,168;CL:0002087,8.94e-21,115;CL:0000738,2.76e-20,136;CL:0000988,4.30e-19,177;CL:0002032,5.98e-17,161;CL:0000837,5.98e-17,161;CL:0000236,3.86e-16,14;CL:0002031,6.71e-16,120;CL:0000624,5.81e-14,6;CL:0000945,2.17e-08,24;CL:0000826,2.17e-08,24;CL:0000898,3.51e-08,3;CL:0000226,2.57e-07,3;CL:0000842,2.57e-07,3;CL:0000623,2.93e-07,3;CL:0000825,2.93e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.04e-39;18!CL:0000051;7.60e-24;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.04e-11!15;UBERON:0000179!2.04e-11!15;UBERON:0000463!2.04e-11!15;UBERON:0007023!4.25e-10!115;UBERON:0004177!6.92e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-18;15!UBERON:0000179;1.03e-18;15!UBERON:0000463;1.03e-18;15!UBERON:0002390;5.20e-14;32!UBERON:0002193;1.75e-09;42!UBERON:0004177;3.88e-07;5!UBERON:0005057;3.88e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.06e-18,15;UBERON:0000179,1.06e-18,15;UBERON:0000463,1.06e-18,15;UBERON:0004177,1.12e-10,7;UBERON:0005057,1.12e-10,7;UBERON:0002370,1.61e-09,4;UBERON:0005058,1.61e-09,4;UBERON:0009113,1.61e-09,4;UBERON:0003295,1.61e-09,4;UBERON:0005562,1.61e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90046415273356,9.59573495243032,0.77408061658038,0,0,0,0,0,2.34880351467878,3.32397245119126,1.20326668482085,1.30206522429511,0.223915474239924,3.56283032620878,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,3.51992488922645,8.19207916893197,8.89509253863555,6.82768356106412,8.00791974072025,7.47178171940828,7.27149360063348,6.67837628174755,5.12291672198504,1.17447437874188,1.14681968437569,0,4.48406850385229,1.31692042387539,13.1795545976268,6.28817220398664,8.01845846098086,27.2513987486805,50.5179513282065,32.1944507899619,42.8618802497405,30.4150547296524,12.668054021418,8.4182879941776,19.7686820548461,8.19784446244321,9.49433237187111,19.7325485524411,22.3843514406537,37.3845980598218,45.0791152012664,38.258338416829,17.7710390468461,27.420860932811,27.2086550457364,29.8955877569888,29.3502842742623,30.9008451894374,33.2052561466773,31.3649174667963,31.4701998872545,35.9642377343916,32.4819889036099,31.2545972698102,36.9507598614471,8.66908995866349,5.08136371988664,7.53086900190555,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,3.5317047953172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,7.88123040807709,7.11570997036407,6.28880877770767,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.09779314940704,7.11856862701436,5.97674323699288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,6.08937131078603,2.29391162142713,5.69647187174163,11.6733569974317,16.0431286503616,5.83625980073446,13.5007859309529,10.3106272918255,0,0,0,0.371606350251437,0.144269212976445,0.284567373393656,1.4348364545594,3.99158742865633,0.5745161103971,0.211673582723883,0,1.68478306868075,4.33645890163065,0,0,0.846458889008016,2.24823305145179,2.82519590067467,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,4.69682656402951,0,0,0,0,0,0,0.511572370226872,0.789147245095469,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,6.13159789174419,3.1396051279005,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0.643012593860077,0.412618309791701,0,0,0,0,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,1.49502377594773,0.314408610199332,1.24271716604159,4.46549419630756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.999936979274649,0.213383459388282,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,1.23478652972711,0.655678681511872,0,0,0,0,0.297046400327086,0,0,2.6315497034359,1.22469987149797,0,0,0,0,0.730336388246517,3.21110498383179,0.143339583151451,0,0,0.436350690340377,1.0580536810308,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,1.27940389140589,0.714193294391221,21.637284795062,14.9600061453018,0,0.12729431655633,0,0.217716747896961,0,4.8493478170503,0.573777643141411,0,0,0,0,0,0,0.122241444182866,0,0,8.4534993308231,0 | |||
|short_description=p3@AKAP7 | |||
}} |
Latest revision as of 18:11, 24 September 2015
Short description: | p3@AKAP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AKAP7_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000537868_5end |
EntrezGene: | AKAP7 |
HGNC: | 377 |
UniProt: | F5H4P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.76e-41 | 52 |
lymphocyte | 4.47e-40 | 53 |
common lymphoid progenitor | 4.47e-40 | 53 |
mature alpha-beta T cell | 4.83e-39 | 18 |
alpha-beta T cell | 4.83e-39 | 18 |
immature T cell | 4.83e-39 | 18 |
mature T cell | 4.83e-39 | 18 |
immature alpha-beta T cell | 4.83e-39 | 18 |
T cell | 1.07e-32 | 25 |
pro-T cell | 1.07e-32 | 25 |
CD8-positive, alpha-beta T cell | 3.78e-25 | 11 |
hematopoietic stem cell | 7.50e-21 | 168 |
nongranular leukocyte | 8.94e-21 | 115 |
leukocyte | 2.76e-20 | 136 |
hematopoietic cell | 4.30e-19 | 177 |
hematopoietic oligopotent progenitor cell | 5.98e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.98e-17 | 161 |
B cell | 3.86e-16 | 14 |
hematopoietic lineage restricted progenitor cell | 6.71e-16 | 120 |
CD4-positive, alpha-beta T cell | 5.81e-14 | 6 |
lymphocyte of B lineage | 2.17e-08 | 24 |
pro-B cell | 2.17e-08 | 24 |
naive T cell | 3.51e-08 | 3 |
single nucleate cell | 2.57e-07 | 3 |
mononuclear cell | 2.57e-07 | 3 |
natural killer cell | 2.93e-07 | 3 |
pro-NK cell | 2.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.06e-18 | 15 |
haemolymphatic fluid | 1.06e-18 | 15 |
organism substance | 1.06e-18 | 15 |
hemopoietic organ | 1.12e-10 | 7 |
immune organ | 1.12e-10 | 7 |
thymus | 1.61e-09 | 4 |
hemolymphoid system gland | 1.61e-09 | 4 |
thymic region | 1.61e-09 | 4 |
pharyngeal gland | 1.61e-09 | 4 |
thymus primordium | 1.61e-09 | 4 |