FFCP PHASE1:Mm9::chr19:44060838..44060849,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=93721|HGNC=|MCL_coexpression_id=3197|UniProt=Q9JJN5|association_with_transcript=160bp_to_NM_030703,uc008hpa.1_5end|description=CAGE_peak_6_at_Cpn1_5end|id=chr19:44060838..44060849,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!2.18e-17!49;UBERON:0005173!2.18e-17!49;UBERON:0002417!2.18e-17!49;UBERON:0000916!2.18e-17!49;UBERON:0005177!3.44e-17!85;UBERON:0002107!4.81e-16!22;UBERON:0007499!4.81e-16!22;UBERON:0006925!4.81e-16!22;UBERON:0009497!4.81e-16!22;UBERON:0000015!4.81e-16!22;UBERON:0002423!4.81e-16!22;UBERON:0006235!4.81e-16!22;UBERON:0008835!4.81e-16!22;UBERON:0003894!4.81e-16!22;UBERON:0004161!4.81e-16!22;UBERON:0008836!4.81e-16!22;UBERON:0009569!1.94e-15!66;UBERON:0009854!5.17e-15!23;UBERON:0009856!5.17e-15!23;UBERON:0002365!3.29e-13!25;UBERON:0002330!3.29e-13!25;UBERON:0000466!5.95e-13!79;UBERON:0002100!1.08e-12!98;UBERON:0003104!2.23e-12!131;UBERON:0009142!2.23e-12!131;UBERON:0002113!1.34e-11!14;UBERON:0003918!1.34e-11!14;UBERON:0005095!1.34e-11!14;UBERON:0007687!1.34e-11!14;UBERON:0001041!2.17e-11!92;UBERON:0000077!4.73e-10!97;UBERON:0004921!8.58e-10!126;UBERON:0004185!8.58e-10!126;UBERON:0006554!1.44e-09!16;UBERON:0001007!2.22e-09!128;UBERON:0001555!2.22e-09!128;UBERON:0007026!2.22e-09!128;UBERON:0004119!5.54e-09!130;UBERON:0000925!5.54e-09!130;UBERON:0006595!5.54e-09!130;UBERON:0001008!9.65e-09!17;UBERON:0003914!3.83e-07!47;UBERON:0000926!8.05e-07!193;UBERON:0004120!8.05e-07!193;UBERON:0006603!8.05e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.58e-19,49;UBERON:0005173,1.58e-19,49;UBERON:0002417,1.58e-19,49;UBERON:0000916,1.58e-19,49;UBERON:0005177,7.61e-19,79;UBERON:0002113,2.69e-18,14;UBERON:0003918,2.69e-18,14;UBERON:0011143,2.69e-18,14;UBERON:0005095,2.69e-18,14;UBERON:0007687,2.69e-18,14;UBERON:0002100,8.01e-16,90;UBERON:0003104,9.75e-15,61;UBERON:0009142,9.75e-15,61;UBERON:0006554,9.02e-14,18;UBERON:0009569,2.94e-13,66;UBERON:0001008,6.14e-13,19;UBERON:0002107,5.37e-12,22;UBERON:0007499,5.37e-12,22;UBERON:0006925,5.37e-12,22;UBERON:0009497,5.37e-12,22;UBERON:0000015,5.37e-12,22;UBERON:0002423,5.37e-12,22;UBERON:0006235,5.37e-12,22;UBERON:0008835,5.37e-12,22;UBERON:0003894,5.37e-12,22;UBERON:0004161,5.37e-12,22;UBERON:0008836,5.37e-12,22;UBERON:0000489,1.64e-11,21;UBERON:0009854,2.22e-11,23;UBERON:0009856,2.22e-11,23;UBERON:0002365,2.70e-10,25;UBERON:0002330,2.70e-10,25;UBERON:0001264,4.80e-07,12|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,1.3599426674155,1.07940638327563,1.29955283489534,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,6.06534620240819,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,0,1.31759163779209,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,1.14248512609729,2.25415471346161,2.03651327845314,1.93952487167626,2.24434623649019,5.31186911843761,1.62371162777562,2.66897837330337,1.60416313098341,1.1858105083486,0.166845105716094,0.589676985339609,0,0.202860121388503,0.482354319504834,1.01850340712568,1.43848068725405,0.810676133875177,1.64736847912849,1.43768206527355,0.744281895337007,2.49630138491648,1.51547326768267,2.15276896226295,0.964887042726734,0,0,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,3.02323556964751,1.13163047853539,0.590603785761546,0,0.258428293168221,1.09060118843252,1.06949213515416,1.26414703174326,2.10837217149998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0.609958401380546,1.18805874903981,2.09088296014469,1.09181281873089,1.48350781023303,3.14083131756277,1.30877970992015,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0.565879024158229,0.187283014939765,0.128050304809739,0.402048282689293,0.952587382566147,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.593175090620871,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0,0,0|short_description=p6@Cpn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93721 | |||
|HGNC= | |||
|MCL_coexpression_id=3197 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJN5 | |||
|association_with_transcript=160bp_to_NM_030703,uc008hpa.1_5end | |||
|cluster_id=chr19:44060838..44060849,- | |||
|description=CAGE_peak_6_at_Cpn1_5end | |||
|id=chr19:44060838..44060849,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.18e-17!49;UBERON:0005173!2.18e-17!49;UBERON:0002417!2.18e-17!49;UBERON:0000916!2.18e-17!49;UBERON:0005177!3.44e-17!85;UBERON:0002107!4.81e-16!22;UBERON:0007499!4.81e-16!22;UBERON:0006925!4.81e-16!22;UBERON:0009497!4.81e-16!22;UBERON:0000015!4.81e-16!22;UBERON:0002423!4.81e-16!22;UBERON:0006235!4.81e-16!22;UBERON:0008835!4.81e-16!22;UBERON:0003894!4.81e-16!22;UBERON:0004161!4.81e-16!22;UBERON:0008836!4.81e-16!22;UBERON:0009569!1.94e-15!66;UBERON:0009854!5.17e-15!23;UBERON:0009856!5.17e-15!23;UBERON:0002365!3.29e-13!25;UBERON:0002330!3.29e-13!25;UBERON:0000466!5.95e-13!79;UBERON:0002100!1.08e-12!98;UBERON:0003104!2.23e-12!131;UBERON:0009142!2.23e-12!131;UBERON:0002113!1.34e-11!14;UBERON:0003918!1.34e-11!14;UBERON:0005095!1.34e-11!14;UBERON:0007687!1.34e-11!14;UBERON:0001041!2.17e-11!92;UBERON:0000077!4.73e-10!97;UBERON:0004921!8.58e-10!126;UBERON:0004185!8.58e-10!126;UBERON:0006554!1.44e-09!16;UBERON:0001007!2.22e-09!128;UBERON:0001555!2.22e-09!128;UBERON:0007026!2.22e-09!128;UBERON:0004119!5.54e-09!130;UBERON:0000925!5.54e-09!130;UBERON:0006595!5.54e-09!130;UBERON:0001008!9.65e-09!17;UBERON:0003914!3.83e-07!47;UBERON:0000926!8.05e-07!193;UBERON:0004120!8.05e-07!193;UBERON:0006603!8.05e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.58e-19,49;UBERON:0005173,1.58e-19,49;UBERON:0002417,1.58e-19,49;UBERON:0000916,1.58e-19,49;UBERON:0005177,7.61e-19,79;UBERON:0002113,2.69e-18,14;UBERON:0003918,2.69e-18,14;UBERON:0011143,2.69e-18,14;UBERON:0005095,2.69e-18,14;UBERON:0007687,2.69e-18,14;UBERON:0002100,8.01e-16,90;UBERON:0003104,9.75e-15,61;UBERON:0009142,9.75e-15,61;UBERON:0006554,9.02e-14,18;UBERON:0009569,2.94e-13,66;UBERON:0001008,6.14e-13,19;UBERON:0002107,5.37e-12,22;UBERON:0007499,5.37e-12,22;UBERON:0006925,5.37e-12,22;UBERON:0009497,5.37e-12,22;UBERON:0000015,5.37e-12,22;UBERON:0002423,5.37e-12,22;UBERON:0006235,5.37e-12,22;UBERON:0008835,5.37e-12,22;UBERON:0003894,5.37e-12,22;UBERON:0004161,5.37e-12,22;UBERON:0008836,5.37e-12,22;UBERON:0000489,1.64e-11,21;UBERON:0009854,2.22e-11,23;UBERON:0009856,2.22e-11,23;UBERON:0002365,2.70e-10,25;UBERON:0002330,2.70e-10,25;UBERON:0001264,4.80e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,1.3599426674155,1.07940638327563,1.29955283489534,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,6.06534620240819,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,0,1.31759163779209,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,1.14248512609729,2.25415471346161,2.03651327845314,1.93952487167626,2.24434623649019,5.31186911843761,1.62371162777562,2.66897837330337,1.60416313098341,1.1858105083486,0.166845105716094,0.589676985339609,0,0.202860121388503,0.482354319504834,1.01850340712568,1.43848068725405,0.810676133875177,1.64736847912849,1.43768206527355,0.744281895337007,2.49630138491648,1.51547326768267,2.15276896226295,0.964887042726734,0,0,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0.242780636154981,3.02323556964751,1.13163047853539,0.590603785761546,0,0.258428293168221,1.09060118843252,1.06949213515416,1.26414703174326,2.10837217149998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0.609958401380546,1.18805874903981,2.09088296014469,1.09181281873089,1.48350781023303,3.14083131756277,1.30877970992015,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.25347929989024,0.565879024158229,0.187283014939765,0.128050304809739,0.402048282689293,0.952587382566147,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0,0.593175090620871,0.394017929502254,0.818462086339379,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0,0,0 | |||
|short_description=p6@Cpn1 | |||
}} |
Latest revision as of 19:39, 25 September 2015
Short description: | p6@Cpn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cpn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3197 |
Association with transcript: | 160bp_to_NM_030703, uc008hpa.1_5end |
EntrezGene: | Cpn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.58e-19 | 49 |
abdominal segment element | 1.58e-19 | 49 |
abdominal segment of trunk | 1.58e-19 | 49 |
abdomen | 1.58e-19 | 49 |
trunk region element | 7.61e-19 | 79 |
kidney | 2.69e-18 | 14 |
kidney mesenchyme | 2.69e-18 | 14 |
upper urinary tract | 2.69e-18 | 14 |
kidney rudiment | 2.69e-18 | 14 |
kidney field | 2.69e-18 | 14 |
trunk | 8.01e-16 | 90 |
mesenchyme | 9.75e-15 | 61 |
entire embryonic mesenchyme | 9.75e-15 | 61 |
urinary system structure | 9.02e-14 | 18 |
subdivision of trunk | 2.94e-13 | 66 |
renal system | 6.14e-13 | 19 |
liver | 5.37e-12 | 22 |
epithelial sac | 5.37e-12 | 22 |
digestive gland | 5.37e-12 | 22 |
epithelium of foregut-midgut junction | 5.37e-12 | 22 |
anatomical boundary | 5.37e-12 | 22 |
hepatobiliary system | 5.37e-12 | 22 |
foregut-midgut junction | 5.37e-12 | 22 |
hepatic diverticulum | 5.37e-12 | 22 |
liver primordium | 5.37e-12 | 22 |
septum transversum | 5.37e-12 | 22 |
liver bud | 5.37e-12 | 22 |
cavitated compound organ | 1.64e-11 | 21 |
digestive tract diverticulum | 2.22e-11 | 23 |
sac | 2.22e-11 | 23 |
exocrine gland | 2.70e-10 | 25 |
exocrine system | 2.70e-10 | 25 |
pancreas | 4.80e-07 | 12 |