FFCP PHASE1:Mm9::chr19:37858699..37858749,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1129|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:37858699..37858749,+|id=chr19:37858699..37858749,+|ontology_enrichment_celltype=CL:0000988!5.97e-08!32;CL:0002032!5.97e-08!32;CL:0000037!5.97e-08!32;CL:0000566!5.97e-08!32;CL:0000837!5.97e-08!32;CL:0000063!2.46e-07!66;CL:0000838!8.67e-07!12;CL:0000791!8.82e-07!9;CL:0000789!8.82e-07!9;CL:0002420!8.82e-07!9;CL:0002419!8.82e-07!9;CL:0000790!8.82e-07!9|ontology_enrichment_celltype_v019_2=CL:0002031,8.96e-17,25;CL:0000084,3.50e-16,11;CL:0000827,3.50e-16,11;CL:0000791,9.31e-16,9;CL:0000789,9.31e-16,9;CL:0002420,9.31e-16,9;CL:0002419,9.31e-16,9;CL:0000790,9.31e-16,9;CL:0000738,1.85e-15,17;CL:0002087,1.85e-15,17;CL:0000838,1.05e-14,12;CL:0000219,1.74e-14,54;CL:0000988,2.81e-14,32;CL:0002032,2.81e-14,32;CL:0000037,2.81e-14,32;CL:0000837,2.81e-14,32;CL:0000893,4.94e-14,6;CL:0002489,4.94e-14,6;CL:0000898,4.94e-14,6;CL:0000809,4.94e-14,6;CL:0000810,4.94e-14,6;CL:0000895,4.94e-14,6;CL:0000808,4.94e-14,6;CL:0000894,4.94e-14,6;CL:0000806,4.94e-14,6;CL:0000807,4.94e-14,6;CL:0000805,4.94e-14,6;CL:0002425,4.94e-14,6;CL:0002436,4.94e-14,6;CL:0002427,4.94e-14,6;CL:0002428,4.94e-14,6;CL:0002429,4.94e-14,6;CL:0002433,4.94e-14,6;CL:0002431,4.94e-14,6;CL:0002432,4.94e-14,6;CL:0000624,7.27e-14,8;CL:0002320,1.07e-13,46;CL:0000134,1.07e-13,46;CL:0000542,1.88e-13,13;CL:0000051,1.88e-13,13;CL:0000215,4.27e-09,3;CL:0000349,6.52e-09,3;CL:0000351,6.52e-09,3;CL:0000068,2.38e-08,3;CL:0002202,2.38e-08,3;CL:0000069,2.38e-08,3;CL:0002632,2.38e-08,3;CL:0002368,2.38e-08,3;CL:0000307,2.38e-08,3;CL:0000377,2.38e-08,3;CL:0000034,9.60e-08,97;CL:0002076,3.72e-07,15;CL:0000217,6.26e-07,2;CL:0000328,6.26e-07,2;CL:0002573,6.26e-07,2;CL:0002376,6.26e-07,2;CL:0000218,6.26e-07,2;CL:0000692,6.26e-07,2;CL:0002377,6.26e-07,2;CL:0002375,6.26e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-13,46;UBERON:0000358,6.52e-09,3;UBERON:0000307,6.52e-09,3;UBERON:0007010,6.52e-09,3;UBERON:0003126,2.38e-08,3;UBERON:0001005,2.38e-08,3;UBERON:0007196,2.38e-08,3;UBERON:0001558,2.38e-08,3;UBERON:0002193,1.84e-07,48;UBERON:0002405,1.84e-07,48;UBERON:0000072,2.27e-07,27|phase1_expression=0.160148847104794,0.348975407639361,0,1.51232105653415,1.50268718983904,0.33575854382378,1.16806320297763,0.903863264091034,1.267098499365,1.63845168425395,3.08192342805909,2.15384829287408,1.36960583944965,1.83582845079895,0,5.06188168474565,3.49780939064073,0.788655413395594,0.959801035240171,0,0,0,2.35079810225042,3.51983330145495,2.52350209173887,0,0,0,1.90023419456374,0,0.886922042621219,1.90509202037889,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.838913030288682,1.45072428402269,1.34437519656986,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0.279182999001381,0,0.45839474333043,0,0,0,8.85996461998253,8.16172849153284,2.31891590961342,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,3.11743205523443,2.47337702157238,0.422530259330042,0,2.54805239706646,0,3.030874574157,3.04031838570118,1.51657333504435,0.11418387971906,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,1.86391761218122,0,0.41889341362691,0.510914110417183,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0.347648640384553,0.767146371990992,0,0,0,0.373220911830279,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0,0.199034266818493,0.702213187313235,1.02939162845886,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.308534225774757,0.697601834251224,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0,0.393117990226406,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.289298117163023,3.01582567878545,5.4390568381871,0,0,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0.556275906031529,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.0974578807397524,0.0962118416403295,0.116876902181569,0,4.43971906748129,5.38283139656854,2.3503846290971,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,4.98374228796694,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p@chr19:37858699..37858749,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1129 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:37858699..37858749,+ | |||
|description=CAGE_peak_at_chr19:37858699..37858749,+ | |||
|id=chr19:37858699..37858749,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.97e-08!32;CL:0002032!5.97e-08!32;CL:0000037!5.97e-08!32;CL:0000566!5.97e-08!32;CL:0000837!5.97e-08!32;CL:0000063!2.46e-07!66;CL:0000838!8.67e-07!12;CL:0000791!8.82e-07!9;CL:0000789!8.82e-07!9;CL:0002420!8.82e-07!9;CL:0002419!8.82e-07!9;CL:0000790!8.82e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,8.96e-17,25;CL:0000084,3.50e-16,11;CL:0000827,3.50e-16,11;CL:0000791,9.31e-16,9;CL:0000789,9.31e-16,9;CL:0002420,9.31e-16,9;CL:0002419,9.31e-16,9;CL:0000790,9.31e-16,9;CL:0000738,1.85e-15,17;CL:0002087,1.85e-15,17;CL:0000838,1.05e-14,12;CL:0000219,1.74e-14,54;CL:0000988,2.81e-14,32;CL:0002032,2.81e-14,32;CL:0000037,2.81e-14,32;CL:0000837,2.81e-14,32;CL:0000893,4.94e-14,6;CL:0002489,4.94e-14,6;CL:0000898,4.94e-14,6;CL:0000809,4.94e-14,6;CL:0000810,4.94e-14,6;CL:0000895,4.94e-14,6;CL:0000808,4.94e-14,6;CL:0000894,4.94e-14,6;CL:0000806,4.94e-14,6;CL:0000807,4.94e-14,6;CL:0000805,4.94e-14,6;CL:0002425,4.94e-14,6;CL:0002436,4.94e-14,6;CL:0002427,4.94e-14,6;CL:0002428,4.94e-14,6;CL:0002429,4.94e-14,6;CL:0002433,4.94e-14,6;CL:0002431,4.94e-14,6;CL:0002432,4.94e-14,6;CL:0000624,7.27e-14,8;CL:0002320,1.07e-13,46;CL:0000134,1.07e-13,46;CL:0000542,1.88e-13,13;CL:0000051,1.88e-13,13;CL:0000215,4.27e-09,3;CL:0000349,6.52e-09,3;CL:0000351,6.52e-09,3;CL:0000068,2.38e-08,3;CL:0002202,2.38e-08,3;CL:0000069,2.38e-08,3;CL:0002632,2.38e-08,3;CL:0002368,2.38e-08,3;CL:0000307,2.38e-08,3;CL:0000377,2.38e-08,3;CL:0000034,9.60e-08,97;CL:0002076,3.72e-07,15;CL:0000217,6.26e-07,2;CL:0000328,6.26e-07,2;CL:0002573,6.26e-07,2;CL:0002376,6.26e-07,2;CL:0000218,6.26e-07,2;CL:0000692,6.26e-07,2;CL:0002377,6.26e-07,2;CL:0002375,6.26e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-13,46;UBERON:0000358,6.52e-09,3;UBERON:0000307,6.52e-09,3;UBERON:0007010,6.52e-09,3;UBERON:0003126,2.38e-08,3;UBERON:0001005,2.38e-08,3;UBERON:0007196,2.38e-08,3;UBERON:0001558,2.38e-08,3;UBERON:0002193,1.84e-07,48;UBERON:0002405,1.84e-07,48;UBERON:0000072,2.27e-07,27 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,1.51232105653415,1.50268718983904,0.33575854382378,1.16806320297763,0.903863264091034,1.267098499365,1.63845168425395,3.08192342805909,2.15384829287408,1.36960583944965,1.83582845079895,0,5.06188168474565,3.49780939064073,0.788655413395594,0.959801035240171,0,0,0,2.35079810225042,3.51983330145495,2.52350209173887,0,0,0,1.90023419456374,0,0.886922042621219,1.90509202037889,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0,0,0.251793635951155,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.838913030288682,1.45072428402269,1.34437519656986,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0.279182999001381,0,0.45839474333043,0,0,0,8.85996461998253,8.16172849153284,2.31891590961342,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,0,3.11743205523443,2.47337702157238,0.422530259330042,0,2.54805239706646,0,3.030874574157,3.04031838570118,1.51657333504435,0.11418387971906,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,1.86391761218122,0,0.41889341362691,0.510914110417183,0.359445373517761,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0.347648640384553,0.767146371990992,0,0,0,0.373220911830279,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0,0.199034266818493,0.702213187313235,1.02939162845886,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.308534225774757,0.697601834251224,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0.147610147979602,0.470996183524124,0,0,0,0.393117990226406,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.289298117163023,3.01582567878545,5.4390568381871,0,0,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0.556275906031529,0,0,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.0974578807397524,0.0962118416403295,0.116876902181569,0,4.43971906748129,5.38283139656854,2.3503846290971,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,4.98374228796694,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr19:37858699..37858749,+ | |||
}} |
Latest revision as of 00:10, 4 August 2015
Short description: | p@chr19:37858699..37858749, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:37858699..37858749, + |
Coexpression cluster: | MCL_coexpression_mm9:1129 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.07e-13 | 46 |
blastocyst | 6.52e-09 | 3 |
blastula | 6.52e-09 | 3 |
cleaving embryo | 6.52e-09 | 3 |
trachea | 2.38e-08 | 3 |
respiratory airway | 2.38e-08 | 3 |
tracheobronchial tree | 2.38e-08 | 3 |
lower respiratory tract | 2.38e-08 | 3 |
hemolymphoid system | 1.84e-07 | 48 |
immune system | 1.84e-07 | 48 |
segment of respiratory tract | 2.27e-07 | 27 |