FFCP PHASE1:Mm9::chr19:32177596..32177644,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=54447|HGNC=|MCL_coexpression_id=20|UniProt=B9EHG7,Q9JHE3,B7ZN55|association_with_transcript=0bp_to_NM_018830,uc008hew.1,uc012bkm.1_5end|description=CAGE_peak_7_at_Asah2_5end|id=chr19:32177596..32177644,-|ontology_enrichment_celltype=CL:0000117!1.96e-07!23;CL:0000337!1.96e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,4.38e-10,3;CL:0002614,6.18e-10,3;CL:0000117,4.04e-09,23;CL:0000337,4.04e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.52e-18!71;UBERON:0003075!1.52e-18!71;UBERON:0007284!1.52e-18!71;UBERON:0001049!7.43e-18!52;UBERON:0005068!7.43e-18!52;UBERON:0006241!7.43e-18!52;UBERON:0007135!7.43e-18!52;UBERON:0002616!1.29e-15!49;UBERON:0000033!3.86e-15!63;UBERON:0000955!4.51e-15!50;UBERON:0006238!4.51e-15!50;UBERON:0001017!5.49e-14!73;UBERON:0005743!5.49e-14!73;UBERON:0004121!2.97e-13!102;UBERON:0000924!2.97e-13!102;UBERON:0006601!2.97e-13!102;UBERON:0000073!3.00e-13!75;UBERON:0001016!3.00e-13!75;UBERON:0002020!4.39e-13!34;UBERON:0003056!1.09e-11!49;UBERON:0003080!9.07e-11!40;UBERON:0002780!6.12e-10!39;UBERON:0001890!6.12e-10!39;UBERON:0006240!6.12e-10!39;UBERON:0002791!2.95e-09!29;UBERON:0003528!2.95e-09!29;UBERON:0001893!2.95e-09!29;UBERON:0003076!1.19e-08!12;UBERON:0003057!1.19e-08!12;UBERON:0002021!1.92e-08!10;UBERON:0000411!1.92e-08!10;UBERON:0001950!1.92e-08!10;UBERON:0007811!2.58e-08!86;UBERON:0002298!4.94e-08!6;UBERON:0002240!5.15e-07!6;UBERON:0005174!5.15e-07!6;UBERON:0001137!5.15e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.34e-38,54;UBERON:0001049,2.52e-33,52;UBERON:0005068,2.52e-33,52;UBERON:0006241,2.52e-33,52;UBERON:0007135,2.52e-33,52;UBERON:0001017,4.88e-29,73;UBERON:0001016,4.03e-28,75;UBERON:0002616,1.75e-26,46;UBERON:0002346,4.05e-26,64;UBERON:0003075,4.05e-26,64;UBERON:0007284,4.05e-26,64;UBERON:0000955,8.03e-26,47;UBERON:0006238,8.03e-26,47;UBERON:0002020,2.18e-23,34;UBERON:0010371,2.89e-22,73;UBERON:0004121,4.56e-21,95;UBERON:0000924,4.56e-21,95;UBERON:0006601,4.56e-21,95;UBERON:0002021,6.55e-21,10;UBERON:0000411,6.55e-21,10;UBERON:0001950,6.55e-21,10;UBERON:0003080,7.18e-20,40;UBERON:0003528,4.43e-19,29;UBERON:0002791,4.43e-19,29;UBERON:0001893,4.43e-19,29;UBERON:0010314,4.29e-18,92;UBERON:0002780,6.83e-18,39;UBERON:0001890,6.83e-18,39;UBERON:0006240,6.83e-18,39;UBERON:0003056,1.63e-15,49;UBERON:0003076,9.22e-15,12;UBERON:0003057,9.22e-15,12;UBERON:0002619,2.21e-14,17;UBERON:0000956,6.82e-14,21;UBERON:0001869,6.82e-14,21;UBERON:0000203,6.82e-14,21;UBERON:0002950,6.42e-13,4;UBERON:0001891,6.42e-13,4;UBERON:0009616,6.42e-13,4;UBERON:0010286,6.42e-13,4;UBERON:0000025,2.21e-12,114;UBERON:0004111,3.18e-11,122;UBERON:0004684,4.38e-10,3;UBERON:0002275,4.38e-10,3;UBERON:0002038,6.18e-10,3;UBERON:0009663,6.18e-10,3;UBERON:0009661,6.18e-10,3;UBERON:0000125,6.18e-10,3;UBERON:0002308,6.18e-10,3;UBERON:0004733,2.86e-08,6;UBERON:0004732,2.86e-08,6;UBERON:0002028,2.86e-08,6;UBERON:0007277,2.86e-08,6;UBERON:0002240,5.24e-08,6;UBERON:0005174,5.24e-08,6;UBERON:0001137,5.24e-08,6;UBERON:0001896,1.22e-07,2;UBERON:0002298,1.22e-07,2;UBERON:0005290,1.22e-07,2;UBERON:0010096,1.22e-07,2;UBERON:0011216,1.85e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,2.28520787523043,0.883474163806454,0,0,0,5.50579404996943,8.17198963745201,9.67721159514334,0.263772575460388,0.274462930807229,0,6.14202597803038,6.75315132038016,7.18151764551008,3.83017161115768,3.55929201997757,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,2.63502717310392,2.51336048176146,0,0,0,0,19.0234112044125,7.77751024791665,0.753926112677186,5.21472960576829,4.09144731728529,12.4672826735736,6.65189178577806,0,0,0,0,0,0,0.360124259610698,0.452114453507145,0,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.6651626876683,18.4022347949759,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,30.0388989257026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,2.30162618253588,2.86447756719698,1.3748254587495,2.05524755931193,2.2661816921691,0,4.05289082901798,4.07828168085784,3.62432218226274,0,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0.666740183404846,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.17230640686684,0,0.579421629724277,0.77163688185482,0.412085900803307,0.294397840268795,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.543216455383447,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p7@Asah2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54447 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=B9EHG7,Q9JHE3,B7ZN55 | |||
|association_with_transcript=0bp_to_NM_018830,uc008hew.1,uc012bkm.1_5end | |||
|cluster_id=chr19:32177596..32177644,- | |||
|description=CAGE_peak_7_at_Asah2_5end | |||
|id=chr19:32177596..32177644,- | |||
|ontology_enrichment_celltype=CL:0000117!1.96e-07!23;CL:0000337!1.96e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.38e-10,3;CL:0002614,6.18e-10,3;CL:0000117,4.04e-09,23;CL:0000337,4.04e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.52e-18!71;UBERON:0003075!1.52e-18!71;UBERON:0007284!1.52e-18!71;UBERON:0001049!7.43e-18!52;UBERON:0005068!7.43e-18!52;UBERON:0006241!7.43e-18!52;UBERON:0007135!7.43e-18!52;UBERON:0002616!1.29e-15!49;UBERON:0000033!3.86e-15!63;UBERON:0000955!4.51e-15!50;UBERON:0006238!4.51e-15!50;UBERON:0001017!5.49e-14!73;UBERON:0005743!5.49e-14!73;UBERON:0004121!2.97e-13!102;UBERON:0000924!2.97e-13!102;UBERON:0006601!2.97e-13!102;UBERON:0000073!3.00e-13!75;UBERON:0001016!3.00e-13!75;UBERON:0002020!4.39e-13!34;UBERON:0003056!1.09e-11!49;UBERON:0003080!9.07e-11!40;UBERON:0002780!6.12e-10!39;UBERON:0001890!6.12e-10!39;UBERON:0006240!6.12e-10!39;UBERON:0002791!2.95e-09!29;UBERON:0003528!2.95e-09!29;UBERON:0001893!2.95e-09!29;UBERON:0003076!1.19e-08!12;UBERON:0003057!1.19e-08!12;UBERON:0002021!1.92e-08!10;UBERON:0000411!1.92e-08!10;UBERON:0001950!1.92e-08!10;UBERON:0007811!2.58e-08!86;UBERON:0002298!4.94e-08!6;UBERON:0002240!5.15e-07!6;UBERON:0005174!5.15e-07!6;UBERON:0001137!5.15e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.34e-38,54;UBERON:0001049,2.52e-33,52;UBERON:0005068,2.52e-33,52;UBERON:0006241,2.52e-33,52;UBERON:0007135,2.52e-33,52;UBERON:0001017,4.88e-29,73;UBERON:0001016,4.03e-28,75;UBERON:0002616,1.75e-26,46;UBERON:0002346,4.05e-26,64;UBERON:0003075,4.05e-26,64;UBERON:0007284,4.05e-26,64;UBERON:0000955,8.03e-26,47;UBERON:0006238,8.03e-26,47;UBERON:0002020,2.18e-23,34;UBERON:0010371,2.89e-22,73;UBERON:0004121,4.56e-21,95;UBERON:0000924,4.56e-21,95;UBERON:0006601,4.56e-21,95;UBERON:0002021,6.55e-21,10;UBERON:0000411,6.55e-21,10;UBERON:0001950,6.55e-21,10;UBERON:0003080,7.18e-20,40;UBERON:0003528,4.43e-19,29;UBERON:0002791,4.43e-19,29;UBERON:0001893,4.43e-19,29;UBERON:0010314,4.29e-18,92;UBERON:0002780,6.83e-18,39;UBERON:0001890,6.83e-18,39;UBERON:0006240,6.83e-18,39;UBERON:0003056,1.63e-15,49;UBERON:0003076,9.22e-15,12;UBERON:0003057,9.22e-15,12;UBERON:0002619,2.21e-14,17;UBERON:0000956,6.82e-14,21;UBERON:0001869,6.82e-14,21;UBERON:0000203,6.82e-14,21;UBERON:0002950,6.42e-13,4;UBERON:0001891,6.42e-13,4;UBERON:0009616,6.42e-13,4;UBERON:0010286,6.42e-13,4;UBERON:0000025,2.21e-12,114;UBERON:0004111,3.18e-11,122;UBERON:0004684,4.38e-10,3;UBERON:0002275,4.38e-10,3;UBERON:0002038,6.18e-10,3;UBERON:0009663,6.18e-10,3;UBERON:0009661,6.18e-10,3;UBERON:0000125,6.18e-10,3;UBERON:0002308,6.18e-10,3;UBERON:0004733,2.86e-08,6;UBERON:0004732,2.86e-08,6;UBERON:0002028,2.86e-08,6;UBERON:0007277,2.86e-08,6;UBERON:0002240,5.24e-08,6;UBERON:0005174,5.24e-08,6;UBERON:0001137,5.24e-08,6;UBERON:0001896,1.22e-07,2;UBERON:0002298,1.22e-07,2;UBERON:0005290,1.22e-07,2;UBERON:0010096,1.22e-07,2;UBERON:0011216,1.85e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,2.28520787523043,0.883474163806454,0,0,0,5.50579404996943,8.17198963745201,9.67721159514334,0.263772575460388,0.274462930807229,0,6.14202597803038,6.75315132038016,7.18151764551008,3.83017161115768,3.55929201997757,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,2.63502717310392,2.51336048176146,0,0,0,0,19.0234112044125,7.77751024791665,0.753926112677186,5.21472960576829,4.09144731728529,12.4672826735736,6.65189178577806,0,0,0,0,0,0,0.360124259610698,0.452114453507145,0,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0,0.462801338662135,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.6651626876683,18.4022347949759,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,30.0388989257026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,2.30162618253588,2.86447756719698,1.3748254587495,2.05524755931193,2.2661816921691,0,4.05289082901798,4.07828168085784,3.62432218226274,0,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0.666740183404846,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.17230640686684,0,0.579421629724277,0.77163688185482,0.412085900803307,0.294397840268795,0,0.177475806159338,0.715308569841963,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.543216455383447,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p7@Asah2 | |||
}} |
Latest revision as of 15:03, 25 September 2015
Short description: | p7@Asah2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Asah2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_NM_018830, uc008hew.1, uc012bkm.1_5end |
EntrezGene: | Asah2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.38e-10 | 3 |
neuron of the substantia nigra | 6.18e-10 | 3 |
CNS neuron (sensu Vertebrata) | 4.04e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.04e-09 | 23 |