FFCP PHASE1:Hg19::chr6:10528731..10528766,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N0V5 | |||
|association_with_transcript=142bp_to_ENST00000379597,uc003mzc.3_5end | |||
|cluster_id=chr6:10528731..10528766,+ | |||
|description=CAGE_peak_1_at_GCNT2_5end | |||
|id=chr6:10528731..10528766,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.85e-12!45;CL:0002087!9.51e-12!119;CL:0002057!7.52e-11!42;CL:0002194!1.83e-10!63;CL:0000576!1.83e-10!63;CL:0000040!1.83e-10!63;CL:0000559!1.83e-10!63;CL:0002009!3.97e-10!65;CL:0002031!2.47e-09!124;CL:0000557!8.35e-09!71;CL:0000738!1.69e-08!140;CL:0000839!2.17e-08!70;CL:0002139!2.05e-07!24;CL:0000766!5.02e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.58e-08;24!CL:0000182;6.39e-08;12!CL:0000860;1.57e-07;33!CL:0002057;1.57e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.12e-08,24;CL:0000066,5.44e-08,253;CL:0000182,5.46e-08,12;CL:0000115,7.30e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.19e-11;29!UBERON:0001041;6.86e-11;30!UBERON:0009497;3.90e-08;13!UBERON:0006595;4.71e-07;86!UBERON:0004161;7.55e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.06e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002405!3.83e-12!115;UBERON:0007023!6.50e-12!115;UBERON:0002193!2.19e-10!112;UBERON:0002390!1.73e-08!102;UBERON:0003061!1.73e-08!102;UBERON:0005177!3.39e-08!107;UBERON:0004921!1.18e-07!129;UBERON:0004185!1.18e-07!129;UBERON:0005172!3.12e-07!55;UBERON:0005173!3.12e-07!55;UBERON:0000477!3.86e-07!286;UBERON:0002371!4.26e-07!80;UBERON:0001041!8.17e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.36e-08;25!UBERON:0001737;1.30e-07;9!UBERON:0001557;1.30e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.56e-11,118;UBERON:0005177,1.89e-10,101;UBERON:0005172,1.46e-09,54;UBERON:0005173,1.46e-09,54;UBERON:0009856,4.00e-09,26;UBERON:0001041,1.15e-08,87;UBERON:0009854,1.67e-08,23;UBERON:0007499,1.97e-08,25;UBERON:0009497,1.97e-08,25;UBERON:0000015,1.97e-08,25;UBERON:0002423,1.97e-08,25;UBERON:0006235,1.97e-08,25;UBERON:0004161,1.97e-08,25;UBERON:0001007,3.96e-08,145;UBERON:0001555,3.96e-08,145;UBERON:0007026,3.96e-08,145;UBERON:0008835,8.37e-08,22;UBERON:0003894,8.37e-08,22;UBERON:0002417,1.28e-07,60;UBERON:0000916,1.28e-07,60;UBERON:0009569,1.41e-07,112;UBERON:0001737,2.01e-07,9;UBERON:0008947,3.93e-07,38;UBERON:0003258,3.93e-07,38;UBERON:0005911,5.67e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0.85870796139317,0.273748850145768,0.376627918784408,0.687720651731561,0.656804715599566,0.944529375764151,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,0,0.369754010166788,4.10576163075599,3.55423081218554,1.17440175733939,1.10799081706375,0.401088894940283,0.651032612147555,0.895661896959697,0.971680998056939,3.34848237924443,4.79814187972564,5.29026321164333,9.21819432513701,0.929716147622738,0.822335776043652,0.309706370895104,0.863077176966451,2.56160706529101,1.89185783910868,0.689491361473237,0.645484683583826,2.70852973188684,0.941211697713023,1.09162460023138,3.14612878223118,0.306083892370903,3.85114832491312,3.19668562899521,1.64925650093358,3.39088217956774,3.40979800426155,0.870627715885752,2.26954089876456,1.24564449799115,0.75374599577023,3.65038042894141,2.38907729175628,3.63239701580021,4.05105399586321,3.48108626184973,1.26753171787165,1.06302149982522,0.838634582033504,1.34794357375794,3.15371474967163,2.08943262706204,0.285012743741249,0.79566670879636,0.182664153764634,3.51992488922645,1.09227722252426,4.44754626931777,5.12076267079809,5.20514783146816,1.72425731986345,5.2883589822789,1.90810750907073,2.27685187643779,1.17447437874188,0.382273228125229,2.64342657158052,0,0.790152254325231,0.590129310341499,0,0.411202997999018,0.334372990781356,0.32592226663359,0.473447805734733,1.94826728407911,0.334231370655521,0.883817722424512,0,1.08321545506006,0.512365278902701,0,0.657751618414705,1.10540007114339,1.73881851441031,0.296573126324121,0,0,0.113309342697566,0,1.03088233644789,0.759059076058509,0.637130828648193,1.30216690771284,0,0.150575119077773,1.53583933385302,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0.722878304769133,0,0,0,0,0.283604451492204,0.221729397462564,0.87834785693126,3.92937226493138,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0.238490624305342,0,0,4.17401055470081,0.860234595106124,4.85996702250632,2.26123176769604,0,0.275118041940067,1.25396979922086,4.65150166504792,3.20189636418039,4.35136796594071,4.83395180530976,2.28081631715554,3.66093086322254,1.83831540172934,0,6.07238152331742,4.4905874525234,4.39184773884957,0,0.949265659568129,1.64881569537367,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0.368502951935304,0,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.580969714347592,0.310983165046111,0.252320850875628,0,0,0,0,0,0,4.25904480143438,4.04603256187444,4.09718750801919,3.639701100169,3.4860711054785,3.32178866755535,3.23595139584395,2.5508790466295,2.30848294167834,2.95262181849859,0,0,0,21.5483559197112,12.7767538168091,10.0434284135839,0,8.24022538238861,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,4.61972632835436,3.70388410061289,5.51737041480335,0,0,1.47730203652438,0.234004265139238,1.63494278517601,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,4.508350494744,5.34783795781589,4.68869788840188,0,2.57068731758309,6.9078903304101,6.28818151787272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,1.02738161275192,0,1.2329365839288,0.788123040807709,0,0.256686072559497,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,1.03384013061444,1.07857100409308,1.06727557803444,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,3.02148623979056,0.40101294060657,0.276242966807689,0,0,0,2.70719767744447,5.62211960862228,1.56869953835371,2.92278449306521,6.43864936246542,0,2.72149928442425,4.10240240594065,3.08454505380579,0,0.501689773854853,8.41091701048626,0.831076008928724,2.91037181138832,0.219259876645935,0,0.512900250232778,0.328014645699706,0,8.75848599005639,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.661139661443912,0.384380134730212,2.93509238737543,0.4046311234222,0,0.31481234683064,0,0,0,0.869932992075073,0.74129687641568,1.71749864090389,0.372158369359667,0.949138274156178,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98063385144732,1.75380354101505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,8.5670858706869,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,1.42939065274673,4.11362273086194,4.53931317834902,0.540031437238115,0.79312517629427,1.28188885352968,0,4.16568367167754,1.48642540100575,0,0.0711418433484141,0,0.199579371432817,1.1490322207942,1.48171507906718,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,1.70338495076131,0.687010689511529,0,0.223676107892416,0.333698283423817,1.56310476321632,0.835218521685727,0,0.540911356951966,0,0,0,1.02555725490326,0,0.445773537109913,1.98895302764489,0,0,0,0.994147647766298,0.562677665642051,0.111308705022906,0,0,3.18796781201712,4.69682656402951,58.448397502192,0.20453736500431,0.738508832766417,0,4.8528909619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| |||
|short_description=p1@GCNT2 | |||
}} |
Latest revision as of 13:39, 19 September 2015
Short description: | p1@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_ENST00000379597, uc003mzc.3_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q8N0V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.12e-08 | 24 |
epithelial cell | 5.44e-08 | 253 |
hepatocyte | 5.46e-08 | 12 |
endothelial cell | 7.30e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 4.56e-11 | 118 |
trunk region element | 1.89e-10 | 101 |
abdomen element | 1.46e-09 | 54 |
abdominal segment element | 1.46e-09 | 54 |
sac | 4.00e-09 | 26 |
foregut | 1.15e-08 | 87 |
digestive tract diverticulum | 1.67e-08 | 23 |
epithelial sac | 1.97e-08 | 25 |
epithelium of foregut-midgut junction | 1.97e-08 | 25 |
anatomical boundary | 1.97e-08 | 25 |
hepatobiliary system | 1.97e-08 | 25 |
foregut-midgut junction | 1.97e-08 | 25 |
septum transversum | 1.97e-08 | 25 |
digestive system | 3.96e-08 | 145 |
digestive tract | 3.96e-08 | 145 |
primitive gut | 3.96e-08 | 145 |
hepatic diverticulum | 8.37e-08 | 22 |
liver primordium | 8.37e-08 | 22 |
abdominal segment of trunk | 1.28e-07 | 60 |
abdomen | 1.28e-07 | 60 |
subdivision of trunk | 1.41e-07 | 112 |
larynx | 2.01e-07 | 9 |
respiratory primordium | 3.93e-07 | 38 |
endoderm of foregut | 3.93e-07 | 38 |
endo-epithelium | 5.67e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.06e-07 | 106 |