FFCP PHASE1:Hg19::chrX:46433166..46433188,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:46433166..46433188,+
|short_description=p2@CHST7
|description=CAGE_peak_2_at_CHST7_5end
|association_with_transcript=-3bp_to_NM_019886,uc004dgt.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56548 | |EntrezGene=56548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13817 | |HGNC=13817 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS84 | |UniProt=Q9NS84 | ||
|association_with_transcript=-3bp_to_NM_019886,uc004dgt.2_5end | |||
|cluster_id=chrX:46433166..46433188,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_CHST7_5end | |||
|id=chrX:46433166..46433188,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.26e-20!42;CL:0000860!2.24e-16!45;CL:0002194!9.25e-13!63;CL:0000576!9.25e-13!63;CL:0000040!9.25e-13!63;CL:0000559!9.25e-13!63;CL:0000766!1.09e-12!76;CL:0002009!9.27e-12!65;CL:0000839!4.20e-09!70;CL:0000557!8.75e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.13e-17;33!CL:0002057;3.13e-17;33!CL:0000473;2.49e-14;39!CL:0000234;2.49e-14;39!CL:0000576;6.19e-13;48!CL:0000766;1.96e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.10e-23,48;CL:0000234,8.10e-23,48;CL:0000860,9.24e-23,42;CL:0002057,9.24e-23,42;CL:0000766,1.12e-18,72;CL:0002194,1.40e-18,59;CL:0000576,1.40e-18,59;CL:0000040,1.40e-18,59;CL:0000559,1.40e-18,59;CL:0002009,3.12e-17,61;CL:0000839,2.76e-14,66;CL:0000557,9.25e-14,67;CL:0000738,1.06e-08,136;CL:0000763,9.91e-08,108;CL:0000049,9.91e-08,108;CL:0002087,1.40e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.26e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.25e-15!216;UBERON:0002204!2.37e-11!167;UBERON:0002390!6.78e-11!102;UBERON:0003061!6.78e-11!102;UBERON:0002193!3.29e-10!112;UBERON:0001009!1.11e-09!113;UBERON:0002371!1.40e-09!80;UBERON:0002405!1.83e-09!115;UBERON:0001474!9.47e-09!86;UBERON:0004535!1.23e-08!110;UBERON:0000926!1.24e-07!448;UBERON:0004120!1.24e-07!448;UBERON:0006603!1.24e-07!448;UBERON:0004765!1.36e-07!101;UBERON:0001434!1.36e-07!101;UBERON:0001981!2.35e-07!60;UBERON:0007500!2.35e-07!60;UBERON:0004537!2.35e-07!60;UBERON:0006965!2.35e-07!60;UBERON:0004872!2.87e-07!84;UBERON:0000055!6.51e-07!69;UBERON:0002049!7.21e-07!79;UBERON:0007798!7.21e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.96e-18,203;UBERON:0000926,6.45e-15,315;UBERON:0004120,6.45e-15,315;UBERON:0006603,6.45e-15,315;UBERON:0002371,3.55e-14,76;UBERON:0002390,8.08e-14,98;UBERON:0003061,8.08e-14,98;UBERON:0001474,6.08e-13,82;UBERON:0002405,8.68e-13,93;UBERON:0002193,3.27e-12,108;UBERON:0004765,2.01e-11,90;UBERON:0002204,3.88e-11,167;UBERON:0001434,2.56e-10,100;UBERON:0001009,3.10e-07,112 | |||
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| ||
|short_description=p2@CHST7 | |||
}} | }} |
Latest revision as of 04:46, 25 September 2015
Short description: | p2@CHST7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHST7_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -3bp_to_NM_019886, uc004dgt.2_5end |
EntrezGene: | CHST7 |
HGNC: | 13817 |
UniProt: | Q9NS84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.10e-23 | 48 |
phagocyte | 8.10e-23 | 48 |
classical monocyte | 9.24e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.24e-23 | 42 |
myeloid leukocyte | 1.12e-18 | 72 |
monopoietic cell | 1.40e-18 | 59 |
monocyte | 1.40e-18 | 59 |
monoblast | 1.40e-18 | 59 |
promonocyte | 1.40e-18 | 59 |
macrophage dendritic cell progenitor | 3.12e-17 | 61 |
myeloid lineage restricted progenitor cell | 2.76e-14 | 66 |
granulocyte monocyte progenitor cell | 9.25e-14 | 67 |
leukocyte | 1.06e-08 | 136 |
myeloid cell | 9.91e-08 | 108 |
common myeloid progenitor | 9.91e-08 | 108 |
nongranular leukocyte | 1.40e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.96e-18 | 203 |
mesoderm | 6.45e-15 | 315 |
mesoderm-derived structure | 6.45e-15 | 315 |
presumptive mesoderm | 6.45e-15 | 315 |
bone marrow | 3.55e-14 | 76 |
hematopoietic system | 8.08e-14 | 98 |
blood island | 8.08e-14 | 98 |
bone element | 6.08e-13 | 82 |
immune system | 8.68e-13 | 93 |
hemolymphoid system | 3.27e-12 | 108 |
skeletal element | 2.01e-11 | 90 |
musculoskeletal system | 3.88e-11 | 167 |
skeletal system | 2.56e-10 | 100 |
circulatory system | 3.10e-07 | 112 |