FFCP PHASE1:Mm9::chr19:11679223..11679238,-: Difference between revisions
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{{FFCP|EntrezGene=68774|HGNC=|MCL_coexpression_id=86|UniProt=Q2TVW7,Q99N07|association_with_transcript=55bp_to_NM_026835,uc008gsm.1_5end|description=CAGE_peak_3_at_Ms4a6d_5end|id=chr19:11679223..11679238,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,8.53e-15,3;CL:0002540,8.53e-15,3;CL:0000355,1.12e-12,9;CL:0002194,4.34e-11,4;CL:0000766,4.34e-11,4;CL:0000234,4.34e-11,4;CL:0000576,4.34e-11,4;CL:0000235,4.34e-11,4;CL:0000864,4.34e-11,4;CL:0002009,4.34e-11,4;CL:0000040,4.34e-11,4;CL:0000559,4.34e-11,4;CL:0002476,9.58e-11,2;CL:0002494,5.99e-07,3;CL:0000737,5.99e-07,3;CL:0000746,5.99e-07,3;CL:0000513,5.99e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.44e-14,3;DOID:4045,1.44e-14,3;DOID:0050686,1.60e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.14e-16,32;UBERON:0001134,1.12e-12,9;UBERON:0002036,1.12e-12,9;UBERON:0002385,1.12e-12,9;UBERON:0000486,1.12e-12,9;UBERON:0007503,1.12e-12,9;UBERON:0001015,1.12e-12,9;UBERON:0002329,1.12e-12,9;UBERON:0003082,1.12e-12,9;UBERON:0003059,1.12e-12,9;UBERON:0007282,1.12e-12,9;UBERON:0004290,1.12e-12,9;UBERON:0009618,1.12e-12,9;UBERON:0000383,2.15e-11,10;UBERON:0007524,2.43e-10,11;UBERON:0003077,2.43e-10,11;UBERON:0007285,2.43e-10,11;UBERON:0002371,4.02e-10,16;UBERON:0001474,3.24e-07,22;UBERON:0004765,3.24e-07,22;UBERON:0001434,3.24e-07,22|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0.666219523631325,0.809901069559304,0,0.473193248037357,0,0,0.425216450755349,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,2.09265815368454,14.8453715459522,6.28228492768558,0,0,0.971020706062307,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,3.15186783932632,2.06268836910977,0,0,0,0,0,12.5985960419396,14.8329954385046,9.2362414942993,1.19840044207362,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,3.10725460376606,0.742210695324124,0,0.913396434936424,0.461230994512117,0.904335843315735,0.823120949949934,0,0,0.722996784599558,0,0,0,0,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.712875546952214,0.497627882440372,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0.378212160335639,0.175951124163949,0.876782929710299,0,0,0.823128545631774,0,0.702213187313235,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0.630869845692382,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0.760902504450237,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0.72353147925725,0.763877555344259,0,0.972811360650212,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0.952174563544055,0,0.315270288212382,0,0.159454768657487,0.163863314715738,1.20879487306127,0.144649058581512,67.8560777726725,140.327666425227,0,0.551873492609465,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0.220528398054962,0.32977250588296,1.13025098687134,0.120625849856312,0,0.492422699235184,0,0,1.19609616558497,0.619160603889667,1.85194527369712,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0,0.523511883968059,0.388844919875379,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0.576060012515731,0,0,0.205421914329655,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.448176066834085,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0,0,0.470546902076653,0.25384382367503,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.859484216193193,1.3390183244819,0.441182838239031,0.231867835620421|short_description=p3@Ms4a6d}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68774 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TVW7,Q99N07 | |||
|association_with_transcript=55bp_to_NM_026835,uc008gsm.1_5end | |||
|cluster_id=chr19:11679223..11679238,- | |||
|description=CAGE_peak_3_at_Ms4a6d_5end | |||
|id=chr19:11679223..11679238,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,8.53e-15,3;CL:0002540,8.53e-15,3;CL:0000355,1.12e-12,9;CL:0002194,4.34e-11,4;CL:0000766,4.34e-11,4;CL:0000234,4.34e-11,4;CL:0000576,4.34e-11,4;CL:0000235,4.34e-11,4;CL:0000864,4.34e-11,4;CL:0002009,4.34e-11,4;CL:0000040,4.34e-11,4;CL:0000559,4.34e-11,4;CL:0002476,9.58e-11,2;CL:0002494,5.99e-07,3;CL:0000737,5.99e-07,3;CL:0000746,5.99e-07,3;CL:0000513,5.99e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.44e-14,3;DOID:4045,1.44e-14,3;DOID:0050686,1.60e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.14e-16,32;UBERON:0001134,1.12e-12,9;UBERON:0002036,1.12e-12,9;UBERON:0002385,1.12e-12,9;UBERON:0000486,1.12e-12,9;UBERON:0007503,1.12e-12,9;UBERON:0001015,1.12e-12,9;UBERON:0002329,1.12e-12,9;UBERON:0003082,1.12e-12,9;UBERON:0003059,1.12e-12,9;UBERON:0007282,1.12e-12,9;UBERON:0004290,1.12e-12,9;UBERON:0009618,1.12e-12,9;UBERON:0000383,2.15e-11,10;UBERON:0007524,2.43e-10,11;UBERON:0003077,2.43e-10,11;UBERON:0007285,2.43e-10,11;UBERON:0002371,4.02e-10,16;UBERON:0001474,3.24e-07,22;UBERON:0004765,3.24e-07,22;UBERON:0001434,3.24e-07,22 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0.666219523631325,0.809901069559304,0,0.473193248037357,0,0,0.425216450755349,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.886922042621219,0,0,0,0,0,0,2.09265815368454,14.8453715459522,6.28228492768558,0,0,0.971020706062307,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0.771778308107841,3.15186783932632,2.06268836910977,0,0,0,0,0,12.5985960419396,14.8329954385046,9.2362414942993,1.19840044207362,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,3.10725460376606,0.742210695324124,0,0.913396434936424,0.461230994512117,0.904335843315735,0.823120949949934,0,0,0.722996784599558,0,0,0,0,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.712875546952214,0.497627882440372,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0.378212160335639,0.175951124163949,0.876782929710299,0,0,0.823128545631774,0,0.702213187313235,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0,0.146199987425332,0.219550115291051,0.134206418760372,0.630869845692382,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0.760902504450237,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0.393117990226406,0,0.202860121388503,0.72353147925725,0.763877555344259,0,0.972811360650212,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0.952174563544055,0,0.315270288212382,0,0.159454768657487,0.163863314715738,1.20879487306127,0.144649058581512,67.8560777726725,140.327666425227,0,0.551873492609465,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0.220528398054962,0.32977250588296,1.13025098687134,0.120625849856312,0,0.492422699235184,0,0,1.19609616558497,0.619160603889667,1.85194527369712,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0,0.523511883968059,0.388844919875379,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0.576060012515731,0,0,0.205421914329655,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.448176066834085,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0,0,0.470546902076653,0.25384382367503,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.859484216193193,1.3390183244819,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Ms4a6d | |||
}} |
Latest revision as of 22:04, 1 October 2015
Short description: | p3@Ms4a6d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ms4a6d_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 55bp_to_NM_026835, uc008gsm.1_5end |
EntrezGene: | Ms4a6d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 8.53e-15 | 3 |
mesenchymal stem cell of the bone marrow | 8.53e-15 | 3 |
multi-potent skeletal muscle stem cell | 1.12e-12 | 9 |
monopoietic cell | 4.34e-11 | 4 |
myeloid leukocyte | 4.34e-11 | 4 |
phagocyte | 4.34e-11 | 4 |
monocyte | 4.34e-11 | 4 |
macrophage | 4.34e-11 | 4 |
tissue-resident macrophage | 4.34e-11 | 4 |
macrophage dendritic cell progenitor | 4.34e-11 | 4 |
monoblast | 4.34e-11 | 4 |
promonocyte | 4.34e-11 | 4 |
bone marrow macrophage | 9.58e-11 | 2 |
cardiocyte | 5.99e-07 | 3 |
striated muscle cell | 5.99e-07 | 3 |
cardiac muscle cell | 5.99e-07 | 3 |
cardiac muscle myoblast | 5.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.14e-16 | 32 |
skeletal muscle tissue | 1.12e-12 | 9 |
striated muscle tissue | 1.12e-12 | 9 |
muscle tissue | 1.12e-12 | 9 |
multilaminar epithelium | 1.12e-12 | 9 |
epithelial vesicle | 1.12e-12 | 9 |
musculature | 1.12e-12 | 9 |
somite | 1.12e-12 | 9 |
myotome | 1.12e-12 | 9 |
presomitic mesoderm | 1.12e-12 | 9 |
presumptive segmental plate | 1.12e-12 | 9 |
dermomyotome | 1.12e-12 | 9 |
trunk paraxial mesoderm | 1.12e-12 | 9 |
musculature of body | 2.15e-11 | 10 |
dense mesenchyme tissue | 2.43e-10 | 11 |
paraxial mesoderm | 2.43e-10 | 11 |
presumptive paraxial mesoderm | 2.43e-10 | 11 |
bone marrow | 4.02e-10 | 16 |
bone element | 3.24e-07 | 22 |
skeletal element | 3.24e-07 | 22 |
skeletal system | 3.24e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.44e-14 | 3 |
muscle cancer | 1.44e-14 | 3 |
organ system cancer | 1.60e-07 | 6 |