FFCP PHASE1:Hg19::chr5:82969405..82969416,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1404 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2380 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003kim.2_5end | |||
|cluster_id=chr5:82969405..82969416,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_5_at_HAPLN1_5end | |||
|id=chr5:82969405..82969416,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.13e-72!22;UBERON:0000956!1.90e-63!25;UBERON:0000203!1.90e-63!25;UBERON:0001950!2.09e-62!20;UBERON:0001869!2.92e-61!32;UBERON:0001893!1.64e-57!34;UBERON:0002791!2.89e-53!33;UBERON:0002020!1.26e-51!34;UBERON:0003528!1.26e-51!34;UBERON:0001049!8.42e-49!57;UBERON:0005068!8.42e-49!57;UBERON:0006241!8.42e-49!57;UBERON:0007135!8.42e-49!57;UBERON:0002780!3.36e-47!41;UBERON:0001890!3.36e-47!41;UBERON:0006240!3.36e-47!41;UBERON:0003080!5.31e-46!42;UBERON:0001017!4.46e-45!82;UBERON:0005743!9.10e-43!86;UBERON:0000955!5.59e-39!69;UBERON:0006238!5.59e-39!69;UBERON:0002616!5.59e-39!59;UBERON:0000073!2.89e-38!94;UBERON:0001016!2.89e-38!94;UBERON:0007023!5.83e-34!115;UBERON:0003075!9.37e-34!86;UBERON:0007284!9.37e-34!86;UBERON:0002346!4.90e-32!90;UBERON:0003056!1.46e-30!61;UBERON:0000349!1.32e-27!5;UBERON:0001871!9.42e-24!7;UBERON:0000200!3.24e-22!6;UBERON:0000033!7.76e-22!123;UBERON:0000153!1.36e-20!129;UBERON:0007811!1.36e-20!129;UBERON:0004121!4.77e-19!169;UBERON:0000924!1.75e-18!173;UBERON:0006601!1.75e-18!173;UBERON:0001872!1.23e-17!5;UBERON:0002021!1.53e-17!5;UBERON:0002771!1.60e-16!3;UBERON:0000025!2.97e-13!194;UBERON:0001876!2.40e-12!2;UBERON:0001954!5.84e-12!2;UBERON:0003022!5.84e-12!2;UBERON:0002421!5.84e-12!2;UBERON:0002600!5.84e-12!2;UBERON:0000064!3.63e-11!219;UBERON:0004111!1.28e-09!241;UBERON:0002240!2.55e-08!3;UBERON:0000477!4.37e-08!286;UBERON:0000483!4.23e-07!309;UBERON:0000119!5.59e-07!312;UBERON:0002022!5.89e-07!1;UBERON:0007190!6.60e-07!1;UBERON:0001882!8.75e-07!1;UBERON:0005403!8.75e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;2.02e-23;5!UBERON:0001876;2.21e-15;2!UBERON:0001954;2.21e-15;2!UBERON:0003022;2.21e-15;2!UBERON:0002421;2.21e-15;2!UBERON:0002600;2.21e-15;2!UBERON:0002619;9.92e-12;22!UBERON:0000956;1.85e-10;25!UBERON:0000203;1.85e-10;25!UBERON:0001987;1.70e-08;4!UBERON:0002791;2.93e-08;32!UBERON:0001869;2.93e-08;32!UBERON:0002108;6.21e-07;4!UBERON:0002021;6.21e-07;5!UBERON:0001893;6.48e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,1.61e-23,5;UBERON:0001876,1.78e-15,2;UBERON:0001954,2.05e-15,2;UBERON:0003022,2.05e-15,2;UBERON:0002421,2.05e-15,2;UBERON:0002600,2.05e-15,2;UBERON:0002619,9.74e-12,22;UBERON:0000956,1.82e-10,25;UBERON:0000203,1.82e-10,25;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4;UBERON:0002791,2.17e-08,32;UBERON:0001869,2.17e-08,32;UBERON:0003528,6.01e-08,34;UBERON:0002020,6.01e-08,34;UBERON:0001893,6.01e-08,34;UBERON:0002108,6.39e-07,4;UBERON:0002021,6.77e-07,5 | |||
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|short_description=p5@HAPLN1 | |||
}} |
Latest revision as of 01:08, 19 September 2015
Short description: | p5@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HAPLN1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_uc003kim.2_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
limbic system | 1.61e-23 | 5 |
amygdala | 1.78e-15 | 2 |
Ammon's horn | 2.05e-15 | 2 |
lobe parts of cerebral cortex | 2.05e-15 | 2 |
hippocampal formation | 2.05e-15 | 2 |
limbic lobe | 2.05e-15 | 2 |
regional part of cerebral cortex | 9.74e-12 | 22 |
cerebral cortex | 1.82e-10 | 25 |
pallium | 1.82e-10 | 25 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
regional part of telencephalon | 2.17e-08 | 32 |
cerebral hemisphere | 2.17e-08 | 32 |
brain grey matter | 6.01e-08 | 34 |
gray matter | 6.01e-08 | 34 |
telencephalon | 6.01e-08 | 34 |
small intestine | 6.39e-07 | 4 |
occipital lobe | 6.77e-07 | 5 |