FFCP PHASE1:Mm9::chr18:23200142..23200172,-: Difference between revisions
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{{FFCP|EntrezGene=319211|HGNC=|MCL_coexpression_id=60|UniProt=P60954,Q8C0U4|association_with_transcript=0bp_to_ENSMUST00000097651,ENSMUST00000171159,NM_199024,uc008efr.2_5end|description=CAGE_peak_1_at_Nol4_5end|id=chr18:23200142..23200172,-|ontology_enrichment_celltype=CL:0000540!3.76e-14!33;CL:0000047!3.76e-14!33;CL:0000031!3.76e-14!33;CL:0000404!3.76e-14!33;CL:0000393!1.80e-12!39;CL:0000211!1.80e-12!39;CL:0000117!7.25e-12!23;CL:0000337!7.25e-12!23;CL:0000221!1.56e-11!44;CL:0000133!1.56e-11!44;CL:0002319!2.00e-11!43;CL:0000055!7.86e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.96e-17,33;CL:0000047,2.96e-17,33;CL:0000031,2.96e-17,33;CL:0000404,2.96e-17,33;CL:0000117,3.49e-15,23;CL:0000337,3.49e-15,23;CL:0000393,8.05e-13,39;CL:0000211,8.05e-13,39;CL:0000221,3.82e-12,44;CL:0000133,3.82e-12,44;CL:0002319,5.44e-12,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.43e-32!71;UBERON:0003075!6.43e-32!71;UBERON:0007284!6.43e-32!71;UBERON:0001017!1.53e-31!73;UBERON:0005743!1.53e-31!73;UBERON:0000073!1.58e-30!75;UBERON:0001016!1.58e-30!75;UBERON:0004121!1.21e-29!102;UBERON:0000924!1.21e-29!102;UBERON:0006601!1.21e-29!102;UBERON:0000033!6.48e-28!63;UBERON:0003056!8.77e-28!49;UBERON:0001049!8.50e-26!52;UBERON:0005068!8.50e-26!52;UBERON:0006241!8.50e-26!52;UBERON:0007135!8.50e-26!52;UBERON:0000955!1.74e-25!50;UBERON:0006238!1.74e-25!50;UBERON:0002616!8.67e-25!49;UBERON:0003080!6.48e-23!40;UBERON:0002780!2.06e-22!39;UBERON:0001890!2.06e-22!39;UBERON:0006240!2.06e-22!39;UBERON:0002020!4.46e-19!34;UBERON:0007811!2.22e-18!86;UBERON:0002791!3.12e-17!29;UBERON:0003528!3.12e-17!29;UBERON:0001893!3.12e-17!29;UBERON:0000153!1.20e-16!94;UBERON:0000956!2.91e-13!21;UBERON:0001869!2.91e-13!21;UBERON:0000203!2.91e-13!21;UBERON:0002619!9.67e-11!17;UBERON:0002021!1.99e-08!10;UBERON:0000411!1.99e-08!10;UBERON:0001950!1.99e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.84e-41,64;UBERON:0003075,4.84e-41,64;UBERON:0007284,4.84e-41,64;UBERON:0001017,5.67e-38,73;UBERON:0001016,2.92e-36,75;UBERON:0004121,5.70e-36,95;UBERON:0000924,5.70e-36,95;UBERON:0006601,5.70e-36,95;UBERON:0003056,1.76e-35,49;UBERON:0010371,7.43e-34,73;UBERON:0000073,8.58e-34,54;UBERON:0001049,2.53e-32,52;UBERON:0005068,2.53e-32,52;UBERON:0006241,2.53e-32,52;UBERON:0007135,2.53e-32,52;UBERON:0000955,6.49e-30,47;UBERON:0006238,6.49e-30,47;UBERON:0003080,4.90e-29,40;UBERON:0002616,5.18e-29,46;UBERON:0002780,2.26e-28,39;UBERON:0001890,2.26e-28,39;UBERON:0006240,2.26e-28,39;UBERON:0002020,5.69e-24,34;UBERON:0010314,1.50e-22,92;UBERON:0003528,1.63e-21,29;UBERON:0002791,1.63e-21,29;UBERON:0001893,1.63e-21,29;UBERON:0000956,2.95e-16,21;UBERON:0001869,2.95e-16,21;UBERON:0000203,2.95e-16,21;UBERON:0002619,6.10e-13,17;UBERON:0002021,1.22e-10,10;UBERON:0000411,1.22e-10,10;UBERON:0001950,1.22e-10,10;UBERON:0001894,1.28e-07,10;UBERON:0006222,1.28e-07,10;UBERON:0000970,6.40e-07,9;UBERON:0000019,6.40e-07,9;UBERON:0000047,6.40e-07,9;UBERON:0010312,6.40e-07,9;UBERON:0004088,6.40e-07,9;UBERON:0002104,6.40e-07,9;UBERON:0001456,6.40e-07,9;UBERON:0003072,6.40e-07,9;UBERON:0004128,6.40e-07,9;UBERON:0003071,6.40e-07,9|phase1_expression=0.160148847104794,0,0,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,8.07911256435163,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0.872100625521786,0.439372365468944,1.1665793944457,0.279972843250725,0,0,0,0,0.514518872071894,0,0.515672092277442,5.66486090406874,8.46385566835253,10.1413024560989,0,0,0,0,0,0.599200221036809,1.15265491596466,14.5165457231869,11.4755047581937,15.5640471400023,2.85650984403804,1.98781686856452,15.0663683034393,14.0892842396807,6.43453150627015,5.50579404996943,7.91661496128164,5.52983519722476,9.49581271657396,7.77644970620482,10.939180781692,2.51264699101243,2.8138130501584,7.94550888439413,5.89257170947335,4.6982654663704,7.08317894136142,0.075726193333184,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0.340860645156116,0,0.35333957451034,1.12674735821344,0,0,0,0.216491041011214,0,0,1.1418387971906,0,1.03909497345377,0.520455980298408,0.913396434936424,0.461230994512117,0.452167921657868,0.823120949949934,0.502666365318702,0,0,0,0,0,0,0,7.02673912827713,5.86450779077674,0,0.239630249011841,0,0,6.74057877321702,17.8425235099264,12.1884721549478,25.8998237086492,24.8043993610421,7.06479351502504,12.1680947300818,0.203678727700633,0.124406970610093,0,1.68353484709179,4.81445638962004,6.20735681970377,8.10279584124071,10.3986324306643,21.0232782377603,19.7295129238669,16.6789069716317,3.10444044886819,0,0.756424320671277,1.58356011747554,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,11.565947171027,12.7601719350313,0.330418782983798,0,0.213288250535234,0.696710015581316,0.644337306610467,0.605050573870028,0,0,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.339490171550376,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0,0,0,0,0,2.24770825982909,3.16471553798949,0.163934945376675,0.252470927204373,4.73262329124385,3.51394869866975,6.46270193198397,0.477937595905104,2.67358408898873,1.69845918473299,5.26253912177363,7.59865230569411,5.92931666919785,14.7807805554031,0,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,1.45668381692989,1.51161778482376,1.32023555829129,0.885905678642318,1.53717573971964,2.32585463851399,1.81766864738753,1.42598951353889,0.632073515871632,0,1.03135543248187,10.8940673841212,5.221771726908,2.71653235943784,7.93047029616891,12.7684968222437,9.63191615051181,9.3792941743209,5.48036908406279,0.469343416127421,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.70850604021019,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.432021363287205,0.209088296014469,0.87345025498471,0,0.330613822901344,0.26175594198403,0,0,67.6431526421028,0.149516546043979,0.165458490457098,0.777804753376191,0.516639293910924,0.168956125490778,0.938857909166032,0.5208175393758,0.419437377702843,0.483168241652012,33.4114807259124,0.632022241256357,1.21635129174099,0.718976700153791,0.909445760844565,0.895133478337407,0.39736270956253,0.360586348559907,0,0.302899349844443,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.350630706544707,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,20.3310663342144,26.2385384809091,24.6345070778941,18.7319968754619,23.2928056722018,26.4387864086395,40.5013500139084,32.8734478353681,30.8136838109259,40.9030646283938,1.45302286617847,1.99512436700516,4.09760653809922,1.94485373654635,2.30574478890781,0.551530525350042,1.33348036680969,0.824140228955577,2.56735367673452,2.27427490587418,4.05566879824384,1.88626341386076,1.96647165686753,1.85672941974121,1.32101578597911,0.952587382566147,2.0859178670074,2.31491064556446,1.23625770240992,1.61918812147837,1.02860775715625,2.12970967391205,1.90748951957857,1.59881058295561,2.35273451038327,2.03075058940024,1.28049581010941,2.63069711437843,2.17286582153379,2.80571135828869,2.25406534435931,2.26560309463796,2.86461730218783,1.54936841185966,1.15743966588685,2.49810577937946,1.63752125911786,1.50409737833809,0.765153328275374,0.220591419119515,0|short_description=p1@Nol4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319211 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=P60954,Q8C0U4 | |||
|association_with_transcript=0bp_to_ENSMUST00000097651,ENSMUST00000171159,NM_199024,uc008efr.2_5end | |||
|cluster_id=chr18:23200142..23200172,- | |||
|description=CAGE_peak_1_at_Nol4_5end | |||
|id=chr18:23200142..23200172,- | |||
|ontology_enrichment_celltype=CL:0000540!3.76e-14!33;CL:0000047!3.76e-14!33;CL:0000031!3.76e-14!33;CL:0000404!3.76e-14!33;CL:0000393!1.80e-12!39;CL:0000211!1.80e-12!39;CL:0000117!7.25e-12!23;CL:0000337!7.25e-12!23;CL:0000221!1.56e-11!44;CL:0000133!1.56e-11!44;CL:0002319!2.00e-11!43;CL:0000055!7.86e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.96e-17,33;CL:0000047,2.96e-17,33;CL:0000031,2.96e-17,33;CL:0000404,2.96e-17,33;CL:0000117,3.49e-15,23;CL:0000337,3.49e-15,23;CL:0000393,8.05e-13,39;CL:0000211,8.05e-13,39;CL:0000221,3.82e-12,44;CL:0000133,3.82e-12,44;CL:0002319,5.44e-12,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.43e-32!71;UBERON:0003075!6.43e-32!71;UBERON:0007284!6.43e-32!71;UBERON:0001017!1.53e-31!73;UBERON:0005743!1.53e-31!73;UBERON:0000073!1.58e-30!75;UBERON:0001016!1.58e-30!75;UBERON:0004121!1.21e-29!102;UBERON:0000924!1.21e-29!102;UBERON:0006601!1.21e-29!102;UBERON:0000033!6.48e-28!63;UBERON:0003056!8.77e-28!49;UBERON:0001049!8.50e-26!52;UBERON:0005068!8.50e-26!52;UBERON:0006241!8.50e-26!52;UBERON:0007135!8.50e-26!52;UBERON:0000955!1.74e-25!50;UBERON:0006238!1.74e-25!50;UBERON:0002616!8.67e-25!49;UBERON:0003080!6.48e-23!40;UBERON:0002780!2.06e-22!39;UBERON:0001890!2.06e-22!39;UBERON:0006240!2.06e-22!39;UBERON:0002020!4.46e-19!34;UBERON:0007811!2.22e-18!86;UBERON:0002791!3.12e-17!29;UBERON:0003528!3.12e-17!29;UBERON:0001893!3.12e-17!29;UBERON:0000153!1.20e-16!94;UBERON:0000956!2.91e-13!21;UBERON:0001869!2.91e-13!21;UBERON:0000203!2.91e-13!21;UBERON:0002619!9.67e-11!17;UBERON:0002021!1.99e-08!10;UBERON:0000411!1.99e-08!10;UBERON:0001950!1.99e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.84e-41,64;UBERON:0003075,4.84e-41,64;UBERON:0007284,4.84e-41,64;UBERON:0001017,5.67e-38,73;UBERON:0001016,2.92e-36,75;UBERON:0004121,5.70e-36,95;UBERON:0000924,5.70e-36,95;UBERON:0006601,5.70e-36,95;UBERON:0003056,1.76e-35,49;UBERON:0010371,7.43e-34,73;UBERON:0000073,8.58e-34,54;UBERON:0001049,2.53e-32,52;UBERON:0005068,2.53e-32,52;UBERON:0006241,2.53e-32,52;UBERON:0007135,2.53e-32,52;UBERON:0000955,6.49e-30,47;UBERON:0006238,6.49e-30,47;UBERON:0003080,4.90e-29,40;UBERON:0002616,5.18e-29,46;UBERON:0002780,2.26e-28,39;UBERON:0001890,2.26e-28,39;UBERON:0006240,2.26e-28,39;UBERON:0002020,5.69e-24,34;UBERON:0010314,1.50e-22,92;UBERON:0003528,1.63e-21,29;UBERON:0002791,1.63e-21,29;UBERON:0001893,1.63e-21,29;UBERON:0000956,2.95e-16,21;UBERON:0001869,2.95e-16,21;UBERON:0000203,2.95e-16,21;UBERON:0002619,6.10e-13,17;UBERON:0002021,1.22e-10,10;UBERON:0000411,1.22e-10,10;UBERON:0001950,1.22e-10,10;UBERON:0001894,1.28e-07,10;UBERON:0006222,1.28e-07,10;UBERON:0000970,6.40e-07,9;UBERON:0000019,6.40e-07,9;UBERON:0000047,6.40e-07,9;UBERON:0010312,6.40e-07,9;UBERON:0004088,6.40e-07,9;UBERON:0002104,6.40e-07,9;UBERON:0001456,6.40e-07,9;UBERON:0003072,6.40e-07,9;UBERON:0004128,6.40e-07,9;UBERON:0003071,6.40e-07,9 | |||
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|short_description=p1@Nol4 | |||
}} |
Latest revision as of 02:38, 27 September 2015
Short description: | p1@Nol4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nol4_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000097651, ENSMUST00000171159, NM_199024, uc008efr.2_5end |
EntrezGene: | Nol4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.96e-17 | 33 |
neuronal stem cell | 2.96e-17 | 33 |
neuroblast | 2.96e-17 | 33 |
electrically signaling cell | 2.96e-17 | 33 |
CNS neuron (sensu Vertebrata) | 3.49e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.49e-15 | 23 |
electrically responsive cell | 8.05e-13 | 39 |
electrically active cell | 8.05e-13 | 39 |
ectodermal cell | 3.82e-12 | 44 |
neurectodermal cell | 3.82e-12 | 44 |
neural cell | 5.44e-12 | 43 |