FFCP PHASE1:Hg19::chrX:2746784..2746795,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:2746784..2746795,+
|short_description=p6@GYG2
|description=CAGE_peak_6_at_GYG2_5end
|association_with_transcript=-33bp_to_ENST00000398806_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8908 | |EntrezGene=8908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4700 | |HGNC=4700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000398806_5end | |||
|cluster_id=chrX:2746784..2746795,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_6_at_GYG2_5end | |||
|id=chrX:2746784..2746795,+ | |||
|ontology_enrichment_celltype=CL:0000147!7.36e-07!14;CL:0000325!8.19e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.86e-21;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.73e-18,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;1.64e-09;2!DOID:962;1.64e-09;2!DOID:1192;9.37e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.02e-09,2;DOID:962,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002346!2.23e-14!90;UBERON:0003075!1.14e-13!86;UBERON:0007284!1.14e-13!86;UBERON:0000955!4.56e-13!69;UBERON:0006238!4.56e-13!69;UBERON:0000033!6.95e-13!123;UBERON:0000073!1.15e-12!94;UBERON:0001016!1.15e-12!94;UBERON:0005743!1.74e-12!86;UBERON:0001049!1.77e-12!57;UBERON:0005068!1.77e-12!57;UBERON:0006241!1.77e-12!57;UBERON:0007135!1.77e-12!57;UBERON:0002616!1.31e-11!59;UBERON:0000153!1.35e-11!129;UBERON:0007811!1.35e-11!129;UBERON:0000475!5.11e-11!365;UBERON:0001017!7.08e-11!82;UBERON:0000924!2.98e-10!173;UBERON:0006601!2.98e-10!173;UBERON:0002107!8.88e-10!19;UBERON:0006925!8.88e-10!19;UBERON:0008836!8.88e-10!19;UBERON:0004121!1.20e-09!169;UBERON:0008835!2.60e-09!22;UBERON:0003894!2.60e-09!22;UBERON:0007499!4.86e-09!25;UBERON:0003056!9.02e-09!61;UBERON:0009854!1.02e-08!23;UBERON:0004733!1.03e-08!12;UBERON:0002028!1.03e-08!12;UBERON:0007277!1.03e-08!12;UBERON:0002020!1.16e-08!34;UBERON:0003528!1.16e-08!34;UBERON:0001893!1.35e-08!34;UBERON:0009856!1.63e-08!26;UBERON:0002791!3.69e-08!33;UBERON:0007023!4.37e-08!115;UBERON:0003076!5.26e-08!15;UBERON:0003057!5.26e-08!15;UBERON:0004732!7.66e-08!13;UBERON:0000483!7.83e-08!309;UBERON:0000481!9.58e-08!347;UBERON:0009497!1.10e-07!25;UBERON:0000015!1.10e-07!25;UBERON:0002423!1.10e-07!25;UBERON:0006235!1.10e-07!25;UBERON:0004161!1.10e-07!25;UBERON:0000119!1.47e-07!312;UBERON:0002298!3.05e-07!8;UBERON:0001869!3.53e-07!32;UBERON:0002780!3.79e-07!41;UBERON:0001890!3.79e-07!41;UBERON:0006240!3.79e-07!41;UBERON:0005057!5.18e-07!26;UBERON:0003080!7.46e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;6.43e-23;3!UBERON:0005290;6.43e-23;3!UBERON:0002298;5.68e-12;6!UBERON:0003714;1.64e-09;2!UBERON:0002107;2.28e-08;19!UBERON:0006925;2.28e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.15e-23,3;UBERON:0005290,5.15e-23,3;UBERON:0010096,5.15e-23,3;UBERON:0002298,5.08e-12,6;UBERON:0003714,2.02e-09,2;UBERON:0002107,2.20e-08,19;UBERON:0006925,2.20e-08,19;UBERON:0008836,2.20e-08,19;UBERON:0008835,2.58e-07,22;UBERON:0003894,2.58e-07,22;UBERON:0009854,5.09e-07,23 | |||
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| ||
|short_description=p6@GYG2 | |||
}} | }} |
Latest revision as of 19:36, 24 September 2015
Short description: | p6@GYG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GYG2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -33bp_to_ENST00000398806_5end |
EntrezGene: | GYG2 |
HGNC: | 4700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.73e-18 | 15 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.15e-23 | 3 |
myelencephalon | 5.15e-23 | 3 |
future myelencephalon | 5.15e-23 | 3 |
brainstem | 5.08e-12 | 6 |
neural tissue | 2.02e-09 | 2 |
liver | 2.20e-08 | 19 |
digestive gland | 2.20e-08 | 19 |
liver bud | 2.20e-08 | 19 |
hepatic diverticulum | 2.58e-07 | 22 |
liver primordium | 2.58e-07 | 22 |
digestive tract diverticulum | 5.09e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.02e-09 | 2 |
neurofibroma | 2.02e-09 | 2 |