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FFCP PHASE1:Mm9::chr18:20716539..20716587,+: Difference between revisions

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{{FFCP|EntrezGene=13511|HGNC=|UniProt=O55111|association_with_transcript=0bp_to_ENSMUST00000059787_5end|description=CAGE_peak_2_at_Dsg2_5end|id=chr18:20716539..20716587,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,5.15e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.20e-16!130;UBERON:0000925!3.20e-16!130;UBERON:0006595!3.20e-16!130;UBERON:0001007!3.94e-15!128;UBERON:0001555!3.94e-15!128;UBERON:0007026!3.94e-15!128;UBERON:0004921!2.14e-14!126;UBERON:0004185!2.14e-14!126;UBERON:0000160!1.49e-13!43;UBERON:0000481!5.42e-12!230;UBERON:0005409!5.46e-11!59;UBERON:0003914!1.61e-10!47;UBERON:0007100!4.04e-08!18;UBERON:0000948!4.04e-08!18;UBERON:0005498!4.04e-08!18;UBERON:0004140!4.04e-08!18;UBERON:0009881!4.04e-08!18;UBERON:0004141!4.04e-08!18;UBERON:0003084!4.04e-08!18;UBERON:0007005!4.04e-08!18;UBERON:0004139!4.04e-08!18;UBERON:0004291!4.04e-08!18;UBERON:0000466!7.52e-08!79;UBERON:0002365!1.26e-07!25;UBERON:0002330!1.26e-07!25;UBERON:0000077!1.28e-07!97;UBERON:0005177!2.22e-07!85;UBERON:0003103!3.06e-07!43;UBERON:0002108!3.60e-07!16;UBERON:0000949!6.36e-07!72;UBERON:0000922!9.49e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.64e-11,118;UBERON:0000925,9.64e-11,118;UBERON:0006595,9.64e-11,118;UBERON:0003914,1.04e-10,47;UBERON:0001007,7.97e-10,116;UBERON:0001555,7.97e-10,116;UBERON:0007026,7.97e-10,116;UBERON:0004921,3.29e-09,114;UBERON:0000160,1.24e-08,31;UBERON:0005177,5.21e-08,79;UBERON:0002365,5.48e-08,25;UBERON:0002330,5.48e-08,25;UBERON:0007100,8.54e-08,18;UBERON:0000948,8.54e-08,18;UBERON:0005498,8.54e-08,18;UBERON:0004140,8.54e-08,18;UBERON:0009881,8.54e-08,18;UBERON:0004141,8.54e-08,18;UBERON:0003084,8.54e-08,18;UBERON:0007005,8.54e-08,18;UBERON:0004139,8.54e-08,18;UBERON:0004291,8.54e-08,18;UBERON:0000949,3.62e-07,72;UBERON:0001264,4.99e-07,12|phase1_expression=2.40223270657191,6.97950815278722,4.09499315450582,3.93203474698879,5.50985302940982,8.2260843236826,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,6.55968933452967,5.04700418347774,6.89078356938024,3.87685796543167,5.60225204983311,3.42042155021473,3.52842181663903,5.54326276638262,0,0,0,7.51014211353314,5.98444723290572,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0.921639199537461,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.372798891650601,0,0,19.4209207430124,4.30211938490693,5.439770669662,5.39703191637817,4.54843492213368,9.40856462904405,2.66844398250329,0,0,0,2.81686839553361,0,0,0,8.65964164044856,7.60079596425296,7.07734223020697,4.33898742932428,2.07150306917737,1.48442139064825,0.520455980298408,1.21786191324856,0.691846491768175,1.80867168663147,1.17588707135705,1.50799909595611,14.5845030963281,0.289198713839823,0,0,0,0,1.86391761218122,0,0.209446706813455,3.57639877292028,0,0,0,0.449371918214468,0,0.125654352112864,0.521472960576829,1.02286182932132,1.0389402227978,0.486723789203273,1.83310854930569,2.98576729464223,9.85618757891331,1.26265113531884,0.260240885925407,1.37941262660084,0.540186389416048,0.452114453507145,0.680364991513279,0.2562274405697,0.749613796477831,0.776110112217047,1.94011193639558,1.32374256117473,1.23165786914764,1.31517439456545,1.66828349535359,2.78601733217733,2.05782136407943,1.59227413454795,0,0,0,9.52778553663309,10.5536726991493,8.82304101158973,11.8372367792605,9.44468312387538,7.40482141859416,11.1616293480196,9.92611585178591,14.2453717687947,12.671108443338,10.6708851651412,12.6467342891535,12.7193989060039,9.44065495751518,16.9100087638068,2.10289948564127,0.102904612379284,2.64335026387038,3.43785736662608,3.41261200856374,2.55460339046482,5.7990357594942,5.84882221407693,5.11469500843202,6.08722003560189,3.79623249235609,3.95277491337626,4.02136334080431,3.97912944082302,4.09424582950152,5.39291645192533,3.24207074812041,3.18626037206988,1.32767530667157,3.19895835307241,6.76246414038483,2.24016460629846,1.74557238450863,2.45475369616115,3.22506339333712,2.95220295959204,1.41298855057237,1.97435462274881,7.70776830426587,2.33583148002532,1.57247196090562,1.57403478669398,1.82574109249653,2.41177159752417,3.8193877767213,4.31544206176216,2.91843408195064,2.19649130550465,7.18841032636773,5.20997326735905,6.24075346229121,8.08252409430758,6.81710171383266,5.30687873499704,1.47802552133284,3.22135400009824,3.91115943460862,3.73439188705414,3.98973422090454,3.85264392116176,2.38043640886014,1.36593553500459,0.945810864637146,0.221464689648775,0.956728611944923,0.81931657357869,0.690739927463582,1.44649058581512,0,0,8.85175691434265,7.72622889653251,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,1.98716119291576,1.78065603667255,1.30309567482861,4.28922319728592,6.63725691699814,6.06951590387454,7.55808892411878,8.11001842950362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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13511
|HGNC=
|TSSclassifier=NA
|UniProt=O55111
|association_with_transcript=0bp_to_ENSMUST00000059787_5end
|cluster_id=chr18:20716539..20716587,+
|description=CAGE_peak_2_at_Dsg2_5end
|id=chr18:20716539..20716587,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,5.15e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.20e-16!130;UBERON:0000925!3.20e-16!130;UBERON:0006595!3.20e-16!130;UBERON:0001007!3.94e-15!128;UBERON:0001555!3.94e-15!128;UBERON:0007026!3.94e-15!128;UBERON:0004921!2.14e-14!126;UBERON:0004185!2.14e-14!126;UBERON:0000160!1.49e-13!43;UBERON:0000481!5.42e-12!230;UBERON:0005409!5.46e-11!59;UBERON:0003914!1.61e-10!47;UBERON:0007100!4.04e-08!18;UBERON:0000948!4.04e-08!18;UBERON:0005498!4.04e-08!18;UBERON:0004140!4.04e-08!18;UBERON:0009881!4.04e-08!18;UBERON:0004141!4.04e-08!18;UBERON:0003084!4.04e-08!18;UBERON:0007005!4.04e-08!18;UBERON:0004139!4.04e-08!18;UBERON:0004291!4.04e-08!18;UBERON:0000466!7.52e-08!79;UBERON:0002365!1.26e-07!25;UBERON:0002330!1.26e-07!25;UBERON:0000077!1.28e-07!97;UBERON:0005177!2.22e-07!85;UBERON:0003103!3.06e-07!43;UBERON:0002108!3.60e-07!16;UBERON:0000949!6.36e-07!72;UBERON:0000922!9.49e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.64e-11,118;UBERON:0000925,9.64e-11,118;UBERON:0006595,9.64e-11,118;UBERON:0003914,1.04e-10,47;UBERON:0001007,7.97e-10,116;UBERON:0001555,7.97e-10,116;UBERON:0007026,7.97e-10,116;UBERON:0004921,3.29e-09,114;UBERON:0000160,1.24e-08,31;UBERON:0005177,5.21e-08,79;UBERON:0002365,5.48e-08,25;UBERON:0002330,5.48e-08,25;UBERON:0007100,8.54e-08,18;UBERON:0000948,8.54e-08,18;UBERON:0005498,8.54e-08,18;UBERON:0004140,8.54e-08,18;UBERON:0009881,8.54e-08,18;UBERON:0004141,8.54e-08,18;UBERON:0003084,8.54e-08,18;UBERON:0007005,8.54e-08,18;UBERON:0004139,8.54e-08,18;UBERON:0004291,8.54e-08,18;UBERON:0000949,3.62e-07,72;UBERON:0001264,4.99e-07,12
|phase1_expression=2.40223270657191,6.97950815278722,4.09499315450582,3.93203474698879,5.50985302940982,8.2260843236826,8.41005506143892,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,6.55968933452967,5.04700418347774,6.89078356938024,3.87685796543167,5.60225204983311,3.42042155021473,3.52842181663903,5.54326276638262,0,0,0,7.51014211353314,5.98444723290572,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0.255374676170375,0.921639199537461,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.372798891650601,0,0,19.4209207430124,4.30211938490693,5.439770669662,5.39703191637817,4.54843492213368,9.40856462904405,2.66844398250329,0,0,0,2.81686839553361,0,0,0,8.65964164044856,7.60079596425296,7.07734223020697,4.33898742932428,2.07150306917737,1.48442139064825,0.520455980298408,1.21786191324856,0.691846491768175,1.80867168663147,1.17588707135705,1.50799909595611,14.5845030963281,0.289198713839823,0,0,0,0,1.86391761218122,0,0.209446706813455,3.57639877292028,0,0,0,0.449371918214468,0,0.125654352112864,0.521472960576829,1.02286182932132,1.0389402227978,0.486723789203273,1.83310854930569,2.98576729464223,9.85618757891331,1.26265113531884,0.260240885925407,1.37941262660084,0.540186389416048,0.452114453507145,0.680364991513279,0.2562274405697,0.749613796477831,0.776110112217047,1.94011193639558,1.32374256117473,1.23165786914764,1.31517439456545,1.66828349535359,2.78601733217733,2.05782136407943,1.59227413454795,0,0,0,9.52778553663309,10.5536726991493,8.82304101158973,11.8372367792605,9.44468312387538,7.40482141859416,11.1616293480196,9.92611585178591,14.2453717687947,12.671108443338,10.6708851651412,12.6467342891535,12.7193989060039,9.44065495751518,16.9100087638068,2.10289948564127,0.102904612379284,2.64335026387038,3.43785736662608,3.41261200856374,2.55460339046482,5.7990357594942,5.84882221407693,5.11469500843202,6.08722003560189,3.79623249235609,3.95277491337626,4.02136334080431,3.97912944082302,4.09424582950152,5.39291645192533,3.24207074812041,3.18626037206988,1.32767530667157,3.19895835307241,6.76246414038483,2.24016460629846,1.74557238450863,2.45475369616115,3.22506339333712,2.95220295959204,1.41298855057237,1.97435462274881,7.70776830426587,2.33583148002532,1.57247196090562,1.57403478669398,1.82574109249653,2.41177159752417,3.8193877767213,4.31544206176216,2.91843408195064,2.19649130550465,7.18841032636773,5.20997326735905,6.24075346229121,8.08252409430758,6.81710171383266,5.30687873499704,1.47802552133284,3.22135400009824,3.91115943460862,3.73439188705414,3.98973422090454,3.85264392116176,2.38043640886014,1.36593553500459,0.945810864637146,0.221464689648775,0.956728611944923,0.81931657357869,0.690739927463582,1.44649058581512,0,0,8.85175691434265,7.72622889653251,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,1.98716119291576,1.78065603667255,1.30309567482861,4.28922319728592,6.63725691699814,6.06951590387454,7.55808892411878,8.11001842950362,7.97315110778086,7.07100840271033,6.20227903603731,9.81541069589265,10.6949213515416,5.68866164284469,7.37930260024991,6.18813259489121,11.234506989875,3.42116078659489,2.8458910432206,7.50179622610573,7.44828981297549,4.8159580752559,5.26556865926787,3.34911444026059,7.97883807416615,22.4541995115649,8.82113592219848,4.122156323537,2.09903754704677,3.31721087104857,4.05865969610664,3.77524069413641,3.20628920292836,0.556275906031529,0,0.619160603889667,0.185194527369712,0.376736914009382,0,0,0.169978429993855,0.139951452323658,0,0,3.00519193902079,3.45643094115643,5.29226170026826,2.92723614420256,3.49380101993884,4.45052343069908,4.1326727862668,4.4498510137285,4.01806417204558,13.6694648879124,0,1.79419855252775,1.15820943319968,1.94451188344048,2.58319646955462,1.520605129417,1.76035857968631,1.17183946359555,0.524296722128554,0,0,0.632022241256357,6.48720688928525,5.75181360123033,5.84643703400078,6.44496104402933,3.77494574084403,3.00488623799922,0.886137163047463,2.01932899896295,1.752756553065,1.20991422164209,1.07203668813728,0.481059208201647,1.05189211963412,0.906921534460845,10.433339808581,6.54911153249173,12.0876923782136,3.28422309854724,4.31669693537719,4.39563898241436,3.00115730710692,9.02829787263654,1.12950368523413,0,0,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0.906284817968409,1.03552062350364,0.518936737920883,1.19707462020309,1.02440163452481,1.94485373654635,1.04806581313991,0.367687016900028,1.33348036680969,1.64828045791115,0.962757628775446,1.01078884705519,1.52087579934144,1.13175804831646,1.96647165686753,1.53660365771686,1.83793500657962,1.42888107384922,2.66533949673168,1.73618298417335,1.23625770240992,1.91358596174717,1.37147700954166,1.95223386775271,0.953744759789284,1.16277133305863,2.07040636913727,1.60767754994185,1.82927972872773,1.31534855718921,1.7654534799962,3.36685362994643,1.89816028998679,1.1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|short_description=p2@Dsg2
}}

Latest revision as of 02:11, 27 September 2015

Short description:p2@Dsg2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dsg2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000059787_5end
EntrezGene:Dsg2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dsg2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.42
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A814.58
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I98.82
heart, embryo E14.CNhs10597.403-26D411.84
heart, embryo E15.CNhs11017.431-16C89.44
heart, embryo E16.CNhs11021.457-17C67.40
heart, embryo E17.CNhs11025.479-18E511.16
heart, embryo E18.CNhs11030.1283-20G39.93
heart, neonate N00.CNhs11213.639-21E314.25
heart, neonate N03.CNhs11221.1349-25I212.67
heart, neonate N10.CNhs11118.749-24G110.67
heart, neonate N16.CNhs11209.782-15G112.65
heart, neonate N20.CNhs11127.821-26I612.72
heart, neonate N25.CNhs11196.1351-25D39.44
heart, neonate N30.CNhs11202.1390-42D216.91
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D85.80
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H16.82
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G322.45
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H33.32
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A94.13
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I25.75
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C16.44
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.09
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.15e-0725

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.64e-11118
endoderm9.64e-11118
presumptive endoderm9.64e-11118
epithelial tube1.04e-1047
digestive system7.97e-10116
digestive tract7.97e-10116
primitive gut7.97e-10116
subdivision of digestive tract3.29e-09114
intestine1.24e-0831
trunk region element5.21e-0879
exocrine gland5.48e-0825
exocrine system5.48e-0825
primary circulatory organ8.54e-0818
heart8.54e-0818
primitive heart tube8.54e-0818
primary heart field8.54e-0818
anterior lateral plate mesoderm8.54e-0818
heart tube8.54e-0818
heart primordium8.54e-0818
cardiac mesoderm8.54e-0818
cardiogenic plate8.54e-0818
heart rudiment8.54e-0818
endocrine system3.62e-0772
pancreas4.99e-0712
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