FFCP PHASE1:Hg19::chrX:23802459..23802507,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:23802459..23802507,+
|short_description=p4@SAT1
|description=CAGE_peak_4_at_SAT1_5end
|association_with_transcript=-362bp_to_ENST00000474223_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6303 | |EntrezGene=6303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10540 | |HGNC=10540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-362bp_to_ENST00000474223_5end | |||
|cluster_id=chrX:23802459..23802507,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_SAT1_5end | |||
|id=chrX:23802459..23802507,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.32e-33!76;CL:0002057!1.56e-32!42;CL:0002009!5.49e-30!65;CL:0000557!7.58e-30!71;CL:0000860!1.77e-29!45;CL:0002194!5.77e-29!63;CL:0000576!5.77e-29!63;CL:0000040!5.77e-29!63;CL:0000559!5.77e-29!63;CL:0000839!5.64e-28!70;CL:0000738!6.57e-22!140;CL:0000763!3.10e-19!112;CL:0000049!3.10e-19!112;CL:0002087!1.06e-16!119;CL:0002031!1.76e-16!124;CL:0002032!5.20e-13!165;CL:0000837!5.20e-13!165;CL:0000037!1.04e-12!172;CL:0000566!1.04e-12!172;CL:0000988!5.71e-11!182;CL:0002393!6.91e-08!9;CL:0002397!6.91e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-63;33!CL:0002057;1.08e-63;33!CL:0000576;8.12e-56;48!CL:0000473;2.65e-52;39!CL:0000234;2.65e-52;39!CL:0000766;1.04e-38;69!CL:0000763;8.58e-18;100!CL:0002087;1.94e-14;104!CL:0002393;3.16e-13;6!CL:0002397;3.16e-13;6!CL:0000738;4.15e-13;136!CL:0000094;9.85e-10;8!CL:0002619;1.36e-07;3!CL:0000875;1.39e-07;3!CL:0002396;1.39e-07;3!CL:0000219;6.16e-07;193!CL:0000081;7.62e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.58e-88,42;CL:0002057,1.58e-88,42;CL:0000473,1.21e-86,48;CL:0000234,1.21e-86,48;CL:0000766,3.84e-82,72;CL:0002194,7.42e-77,59;CL:0000576,7.42e-77,59;CL:0000040,7.42e-77,59;CL:0000559,7.42e-77,59;CL:0002009,6.81e-74,61;CL:0000839,2.87e-70,66;CL:0000557,5.18e-69,67;CL:0000763,9.67e-56,108;CL:0000049,9.67e-56,108;CL:0000738,9.18e-48,136;CL:0002087,2.85e-39,115;CL:0002031,5.06e-37,120;CL:0002032,3.36e-36,161;CL:0000837,3.36e-36,161;CL:0000037,2.11e-35,168;CL:0000988,9.83e-33,177;CL:0002393,3.49e-19,9;CL:0002397,3.49e-19,9;CL:0000134,4.19e-15,354;CL:0002320,1.86e-14,361;CL:0000219,3.43e-12,386;CL:0000094,8.20e-10,8;CL:0000048,1.84e-09,427;CL:0000034,4.22e-09,441;CL:0000723,4.33e-09,433;CL:0000875,1.17e-07,3;CL:0002619,1.17e-07,3;CL:0002396,1.17e-07,3;CL:0000081,6.71e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.88e-63;42!CL:0000049;1.65e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.12e-25!102;UBERON:0003061!5.12e-25!102;UBERON:0002371!3.43e-24!80;UBERON:0001474!1.47e-22!86;UBERON:0002193!2.24e-21!112;UBERON:0004765!7.54e-21!101;UBERON:0001434!7.54e-21!101;UBERON:0002405!2.32e-15!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.53e-59,76;UBERON:0001474,4.09e-56,82;UBERON:0004765,3.04e-54,90;UBERON:0001434,2.50e-47,100;UBERON:0002390,8.62e-47,98;UBERON:0003061,8.62e-47,98;UBERON:0002405,9.07e-46,93;UBERON:0002193,4.27e-41,108;UBERON:0002204,2.00e-22,167;UBERON:0003081,6.49e-17,203;UBERON:0002384,1.41e-13,371;UBERON:0000926,1.12e-08,315;UBERON:0004120,1.12e-08,315;UBERON:0006603,1.12e-08,315 | |||
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| ||
|short_description=p4@SAT1 | |||
}} | }} |
Latest revision as of 17:59, 24 September 2015
Short description: | p4@SAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SAT1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -362bp_to_ENST00000474223_5end |
EntrezGene: | SAT1 |
HGNC: | 10540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.53e-59 | 76 |
bone element | 4.09e-56 | 82 |
skeletal element | 3.04e-54 | 90 |
skeletal system | 2.50e-47 | 100 |
hematopoietic system | 8.62e-47 | 98 |
blood island | 8.62e-47 | 98 |
immune system | 9.07e-46 | 93 |
hemolymphoid system | 4.27e-41 | 108 |
musculoskeletal system | 2.00e-22 | 167 |
lateral plate mesoderm | 6.49e-17 | 203 |
connective tissue | 1.41e-13 | 371 |
mesoderm | 1.12e-08 | 315 |
mesoderm-derived structure | 1.12e-08 | 315 |
presumptive mesoderm | 1.12e-08 | 315 |