FFCP PHASE1:Mm9::chr17:72953998..72954016,-: Difference between revisions
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{{FFCP|EntrezGene=11682|HGNC=|MCL_coexpression_id=905|UniProt=P97793|association_with_transcript=-351bp_to_NM_007439,uc008dnb.1,uc008dnc.1,uc008dnd.1_5end|description=CAGE_peak_2_at_Alk_5end|id=chr17:72953998..72954016,-|ontology_enrichment_celltype=CL:0000540!1.43e-20!33;CL:0000047!1.43e-20!33;CL:0000031!1.43e-20!33;CL:0000404!1.43e-20!33;CL:0000393!2.81e-15!39;CL:0000211!2.81e-15!39;CL:0002319!3.37e-14!43;CL:0000221!1.44e-13!44;CL:0000133!1.44e-13!44;CL:0000117!1.10e-12!23;CL:0000337!1.10e-12!23;CL:0000055!2.19e-10!50;CL:0000107!2.42e-09!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.29e-34,33;CL:0000047,1.29e-34,33;CL:0000031,1.29e-34,33;CL:0000404,1.29e-34,33;CL:0000393,2.89e-28,39;CL:0000211,2.89e-28,39;CL:0002319,5.10e-25,43;CL:0000221,2.67e-24,44;CL:0000133,2.67e-24,44;CL:0000107,9.33e-20,9;CL:0000117,1.00e-18,23;CL:0000337,1.00e-18,23;CL:0002321,7.29e-13,70;CL:0000723,1.84e-08,91;CL:0000048,1.84e-08,91;CL:0002612,1.42e-07,3;CL:0000034,1.44e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.18e-30!73;UBERON:0005743!4.18e-30!73;UBERON:0000073!1.79e-29!75;UBERON:0001016!1.79e-29!75;UBERON:0004121!3.93e-21!102;UBERON:0000924!3.93e-21!102;UBERON:0006601!3.93e-21!102;UBERON:0001049!4.23e-20!52;UBERON:0005068!4.23e-20!52;UBERON:0006241!4.23e-20!52;UBERON:0007135!4.23e-20!52;UBERON:0002346!8.95e-20!71;UBERON:0003075!8.95e-20!71;UBERON:0007284!8.95e-20!71;UBERON:0000955!1.05e-16!50;UBERON:0006238!1.05e-16!50;UBERON:0002616!5.41e-16!49;UBERON:0003080!1.63e-15!40;UBERON:0003056!3.23e-15!49;UBERON:0000033!3.75e-15!63;UBERON:0002780!9.03e-15!39;UBERON:0001890!9.03e-15!39;UBERON:0006240!9.03e-15!39;UBERON:0002020!3.95e-14!34;UBERON:0002791!3.07e-10!29;UBERON:0003528!3.07e-10!29;UBERON:0001893!3.07e-10!29;UBERON:0002410!2.42e-09!9;UBERON:0000010!6.42e-08!11;UBERON:0007811!1.21e-07!86;UBERON:0000153!4.09e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.81e-42,73;UBERON:0001016,1.34e-40,75;UBERON:0004121,4.08e-30,95;UBERON:0000924,4.08e-30,95;UBERON:0006601,4.08e-30,95;UBERON:0000073,1.95e-22,54;UBERON:0001049,1.00e-21,52;UBERON:0005068,1.00e-21,52;UBERON:0006241,1.00e-21,52;UBERON:0007135,1.00e-21,52;UBERON:0002346,1.71e-21,64;UBERON:0003075,1.71e-21,64;UBERON:0007284,1.71e-21,64;UBERON:0002410,9.33e-20,9;UBERON:0010371,6.37e-18,73;UBERON:0000010,8.73e-16,11;UBERON:0002020,1.06e-14,34;UBERON:0000955,1.22e-14,47;UBERON:0006238,1.22e-14,47;UBERON:0002616,1.83e-13,46;UBERON:0002240,3.00e-13,6;UBERON:0005174,3.00e-13,6;UBERON:0001137,3.00e-13,6;UBERON:0003080,8.52e-13,40;UBERON:0010314,1.07e-12,92;UBERON:0002780,1.32e-11,39;UBERON:0001890,1.32e-11,39;UBERON:0006240,1.32e-11,39;UBERON:0001948,1.62e-11,5;UBERON:0002315,1.62e-11,5;UBERON:0003076,1.41e-10,12;UBERON:0003057,1.41e-10,12;UBERON:0002420,1.63e-10,8;UBERON:0007245,1.63e-10,8;UBERON:0010009,1.63e-10,8;UBERON:0010011,1.63e-10,8;UBERON:0000454,1.63e-10,8;UBERON:0011216,5.89e-10,194;UBERON:0003056,1.28e-09,49;UBERON:0002950,3.63e-08,4;UBERON:0001891,3.63e-08,4;UBERON:0009616,3.63e-08,4;UBERON:0010286,3.63e-08,4;UBERON:0003528,3.91e-08,29;UBERON:0002791,3.91e-08,29;UBERON:0001893,3.91e-08,29;UBERON:0000011,5.25e-08,3;UBERON:0000013,9.58e-08,3;UBERON:0002257,1.42e-07,3;UBERON:0010313,3.38e-07,3;UBERON:0002342,3.38e-07,3;UBERON:0002005,3.38e-07,3;UBERON:0005428,3.38e-07,3;UBERON:0005062,3.38e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0,4.28476476605705,5.52171352379034,0.734944795289724,0.0958454710182364,0.919218786610021,0,1.53224805702225,2.61131106535614,1.97829431595291,2.19570344645783,1.04182674111352,2.23346399201105,2.25105044012672,1.98637722109853,7.95497180778903,4.9830088279686,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.69623150928681,1.37250180845588,0.376963056338593,2.25971616249959,1.02286182932132,2.90903262383384,3.40706652442291,0,0,0,0.210441855886474,0,0,0.360124259610698,0.30140963567143,0.272145996605311,0,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.841159794256509,0.411618449517138,0,0,0,0.464473343720877,0.515469845288373,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.16471553798949,0,0,2.83957397474631,3.12350995437311,4.73931475012158,11.4705023017225,10.0259403337077,16.1353622549635,6.47697122679831,6.72188473196017,7.51046778098395,2.57057053137446,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,3.74483566329167,0.36012218806262,0.129358683782755,1.50035924522115,1.24138163549592,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.418176592028937,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,1.5107877947794,2.02506750069542,1.35096360967266,2.26571204492102,2.5888015587591,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.551530525350042,0.44449345560323,0.412070114477788,1.28367683836726,0.252697211763798,0,0.754505365544305,0.842773567228942,0.320125762024346,0.34461281373368,1.42888107384922,0.579421629724277,0,0.412085900803307,0.735994600671987,0,0.532427418478012,0.476872379894642,0.581385666529314,0.376437521661322,0.676916863133412,1.28049581010941,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p2@Alk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11682 | |||
|HGNC= | |||
|MCL_coexpression_id=905 | |||
|TSSclassifier=NA | |||
|UniProt=P97793 | |||
|association_with_transcript=-351bp_to_NM_007439,uc008dnb.1,uc008dnc.1,uc008dnd.1_5end | |||
|cluster_id=chr17:72953998..72954016,- | |||
|description=CAGE_peak_2_at_Alk_5end | |||
|id=chr17:72953998..72954016,- | |||
|ontology_enrichment_celltype=CL:0000540!1.43e-20!33;CL:0000047!1.43e-20!33;CL:0000031!1.43e-20!33;CL:0000404!1.43e-20!33;CL:0000393!2.81e-15!39;CL:0000211!2.81e-15!39;CL:0002319!3.37e-14!43;CL:0000221!1.44e-13!44;CL:0000133!1.44e-13!44;CL:0000117!1.10e-12!23;CL:0000337!1.10e-12!23;CL:0000055!2.19e-10!50;CL:0000107!2.42e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.29e-34,33;CL:0000047,1.29e-34,33;CL:0000031,1.29e-34,33;CL:0000404,1.29e-34,33;CL:0000393,2.89e-28,39;CL:0000211,2.89e-28,39;CL:0002319,5.10e-25,43;CL:0000221,2.67e-24,44;CL:0000133,2.67e-24,44;CL:0000107,9.33e-20,9;CL:0000117,1.00e-18,23;CL:0000337,1.00e-18,23;CL:0002321,7.29e-13,70;CL:0000723,1.84e-08,91;CL:0000048,1.84e-08,91;CL:0002612,1.42e-07,3;CL:0000034,1.44e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.18e-30!73;UBERON:0005743!4.18e-30!73;UBERON:0000073!1.79e-29!75;UBERON:0001016!1.79e-29!75;UBERON:0004121!3.93e-21!102;UBERON:0000924!3.93e-21!102;UBERON:0006601!3.93e-21!102;UBERON:0001049!4.23e-20!52;UBERON:0005068!4.23e-20!52;UBERON:0006241!4.23e-20!52;UBERON:0007135!4.23e-20!52;UBERON:0002346!8.95e-20!71;UBERON:0003075!8.95e-20!71;UBERON:0007284!8.95e-20!71;UBERON:0000955!1.05e-16!50;UBERON:0006238!1.05e-16!50;UBERON:0002616!5.41e-16!49;UBERON:0003080!1.63e-15!40;UBERON:0003056!3.23e-15!49;UBERON:0000033!3.75e-15!63;UBERON:0002780!9.03e-15!39;UBERON:0001890!9.03e-15!39;UBERON:0006240!9.03e-15!39;UBERON:0002020!3.95e-14!34;UBERON:0002791!3.07e-10!29;UBERON:0003528!3.07e-10!29;UBERON:0001893!3.07e-10!29;UBERON:0002410!2.42e-09!9;UBERON:0000010!6.42e-08!11;UBERON:0007811!1.21e-07!86;UBERON:0000153!4.09e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.81e-42,73;UBERON:0001016,1.34e-40,75;UBERON:0004121,4.08e-30,95;UBERON:0000924,4.08e-30,95;UBERON:0006601,4.08e-30,95;UBERON:0000073,1.95e-22,54;UBERON:0001049,1.00e-21,52;UBERON:0005068,1.00e-21,52;UBERON:0006241,1.00e-21,52;UBERON:0007135,1.00e-21,52;UBERON:0002346,1.71e-21,64;UBERON:0003075,1.71e-21,64;UBERON:0007284,1.71e-21,64;UBERON:0002410,9.33e-20,9;UBERON:0010371,6.37e-18,73;UBERON:0000010,8.73e-16,11;UBERON:0002020,1.06e-14,34;UBERON:0000955,1.22e-14,47;UBERON:0006238,1.22e-14,47;UBERON:0002616,1.83e-13,46;UBERON:0002240,3.00e-13,6;UBERON:0005174,3.00e-13,6;UBERON:0001137,3.00e-13,6;UBERON:0003080,8.52e-13,40;UBERON:0010314,1.07e-12,92;UBERON:0002780,1.32e-11,39;UBERON:0001890,1.32e-11,39;UBERON:0006240,1.32e-11,39;UBERON:0001948,1.62e-11,5;UBERON:0002315,1.62e-11,5;UBERON:0003076,1.41e-10,12;UBERON:0003057,1.41e-10,12;UBERON:0002420,1.63e-10,8;UBERON:0007245,1.63e-10,8;UBERON:0010009,1.63e-10,8;UBERON:0010011,1.63e-10,8;UBERON:0000454,1.63e-10,8;UBERON:0011216,5.89e-10,194;UBERON:0003056,1.28e-09,49;UBERON:0002950,3.63e-08,4;UBERON:0001891,3.63e-08,4;UBERON:0009616,3.63e-08,4;UBERON:0010286,3.63e-08,4;UBERON:0003528,3.91e-08,29;UBERON:0002791,3.91e-08,29;UBERON:0001893,3.91e-08,29;UBERON:0000011,5.25e-08,3;UBERON:0000013,9.58e-08,3;UBERON:0002257,1.42e-07,3;UBERON:0010313,3.38e-07,3;UBERON:0002342,3.38e-07,3;UBERON:0002005,3.38e-07,3;UBERON:0005428,3.38e-07,3;UBERON:0005062,3.38e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0,4.28476476605705,5.52171352379034,0.734944795289724,0.0958454710182364,0.919218786610021,0,1.53224805702225,2.61131106535614,1.97829431595291,2.19570344645783,1.04182674111352,2.23346399201105,2.25105044012672,1.98637722109853,7.95497180778903,4.9830088279686,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,2.69623150928681,1.37250180845588,0.376963056338593,2.25971616249959,1.02286182932132,2.90903262383384,3.40706652442291,0,0,0,0.210441855886474,0,0,0.360124259610698,0.30140963567143,0.272145996605311,0,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.841159794256509,0.411618449517138,0,0,0,0.464473343720877,0.515469845288373,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,3.16471553798949,0,0,2.83957397474631,3.12350995437311,4.73931475012158,11.4705023017225,10.0259403337077,16.1353622549635,6.47697122679831,6.72188473196017,7.51046778098395,2.57057053137446,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,3.74483566329167,0.36012218806262,0.129358683782755,1.50035924522115,1.24138163549592,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.418176592028937,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,0,1.5107877947794,2.02506750069542,1.35096360967266,2.26571204492102,2.5888015587591,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.551530525350042,0.44449345560323,0.412070114477788,1.28367683836726,0.252697211763798,0,0.754505365544305,0.842773567228942,0.320125762024346,0.34461281373368,1.42888107384922,0.579421629724277,0,0.412085900803307,0.735994600671987,0,0.532427418478012,0.476872379894642,0.581385666529314,0.376437521661322,0.676916863133412,1.28049581010941,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p2@Alk | |||
}} |
Latest revision as of 20:48, 26 September 2015
Short description: | p2@Alk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Alk_5end |
Coexpression cluster: | MCL_coexpression_mm9:905 |
Association with transcript: | -351bp_to_NM_007439, uc008dnb.1, uc008dnc.1, uc008dnd.1_5end |
EntrezGene: | Alk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.29e-34 | 33 |
neuronal stem cell | 1.29e-34 | 33 |
neuroblast | 1.29e-34 | 33 |
electrically signaling cell | 1.29e-34 | 33 |
electrically responsive cell | 2.89e-28 | 39 |
electrically active cell | 2.89e-28 | 39 |
neural cell | 5.10e-25 | 43 |
ectodermal cell | 2.67e-24 | 44 |
neurectodermal cell | 2.67e-24 | 44 |
autonomic neuron | 9.33e-20 | 9 |
CNS neuron (sensu Vertebrata) | 1.00e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.00e-18 | 23 |
embryonic cell | 7.29e-13 | 70 |
somatic stem cell | 1.84e-08 | 91 |
multi fate stem cell | 1.84e-08 | 91 |
neuron of the ventral spinal cord | 1.42e-07 | 3 |
stem cell | 1.44e-07 | 97 |