FFCP PHASE1:Hg19::chr5:149682447..149682529,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32521 | |||
|TSSclassifier=strong | |||
|UniProt=Q5FYB1 | |||
|association_with_transcript=0bp_to_ENST00000328668,NM_001012301,uc003lrv.2_5end | |||
|cluster_id=chr5:149682447..149682529,- | |||
|description=CAGE_peak_1_at_ARSI_5end | |||
|id=chr5:149682447..149682529,- | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-21!180;CL:0002321!4.54e-15!248;CL:0000220!6.07e-15!246;CL:0000183!4.66e-11!59;CL:0000187!5.24e-10!54;CL:0000221!6.78e-10!71;CL:0000680!7.72e-10!57;CL:0000056!7.72e-10!57;CL:0000355!7.72e-10!57;CL:0000393!1.35e-09!60;CL:0000211!1.35e-09!60;CL:0002077!2.05e-08!33;CL:0000057!3.34e-08!75;CL:0000075!1.31e-07!27;CL:0000192!1.87e-07!42;CL:0000514!1.87e-07!42;CL:0000133!7.85e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000075;1.71e-08;27!CL:0002077;6.92e-08;34!CL:0000723;4.76e-07;61!CL:0000134;5.62e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.37e-16,250;CL:0000187,3.10e-10,55;CL:0000680,4.60e-09,58;CL:0000056,4.60e-09,58;CL:0000355,4.60e-09,58;CL:0000393,1.24e-08,61;CL:0000211,1.24e-08,61;CL:0002077,1.30e-08,34;CL:0000075,1.66e-08,27;CL:0000221,2.47e-08,72;CL:0000192,5.38e-07,43;CL:0000514,5.38e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.86e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.92e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.59e-16!365;UBERON:0000481!8.22e-13!347;UBERON:0000119!5.17e-12!312;UBERON:0000483!1.82e-11!309;UBERON:0005085!1.49e-10!29;UBERON:0000020!2.35e-10!23;UBERON:0005256!5.17e-10!143;UBERON:0001032!1.97e-09!24;UBERON:0004456!1.97e-09!24;UBERON:0000970!2.39e-09!20;UBERON:0000486!3.63e-09!82;UBERON:0000019!5.03e-09!19;UBERON:0000047!5.03e-09!19;UBERON:0004088!5.03e-09!19;UBERON:0003072!5.03e-09!19;UBERON:0003071!5.03e-09!19;UBERON:0004128!5.03e-09!19;UBERON:0004290!9.70e-09!70;UBERON:0002385!1.57e-08!63;UBERON:0001015!1.57e-08!63;UBERON:0000383!1.57e-08!63;UBERON:0001134!1.98e-08!61;UBERON:0002036!1.98e-08!61;UBERON:0003082!1.98e-08!61;UBERON:0002104!2.03e-08!21;UBERON:0000914!2.96e-08!83;UBERON:0002329!2.96e-08!83;UBERON:0003077!2.96e-08!83;UBERON:0003059!2.96e-08!83;UBERON:0007282!2.96e-08!83;UBERON:0009618!2.96e-08!83;UBERON:0007285!2.96e-08!83;UBERON:0000064!5.65e-08!219;UBERON:0001456!5.84e-08!21;UBERON:0003102!6.92e-08!95;UBERON:0007625!1.10e-07!11;UBERON:0001444!2.00e-07!48;UBERON:0002100!2.25e-07!216;UBERON:0001801!4.76e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000020;4.02e-12;23!UBERON:0001032;2.87e-11;24!UBERON:0004456;2.87e-11;24!UBERON:0000970;5.83e-11;20!UBERON:0000019;1.39e-10;19!UBERON:0000047;1.39e-10;19!UBERON:0004088;1.39e-10;19!UBERON:0010230;1.39e-10;19!UBERON:0002104;4.26e-10;21!UBERON:0007625;1.89e-09;11!UBERON:0001456;6.13e-09;21!UBERON:0010371;1.82e-08;31!UBERON:0001801;2.13e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,1.62e-11,24;UBERON:0001032,1.62e-11,24;UBERON:0004456,1.62e-11,24;UBERON:0005085,5.10e-11,31;UBERON:0000970,3.11e-10,21;UBERON:0002104,3.11e-10,21;UBERON:0000019,8.08e-10,20;UBERON:0000047,8.08e-10,20;UBERON:0010312,8.08e-10,20;UBERON:0004088,8.08e-10,20;UBERON:0010230,8.08e-10,20;UBERON:0003072,8.08e-10,20;UBERON:0004128,8.08e-10,20;UBERON:0003071,8.08e-10,20;UBERON:0007625,2.43e-09,11;UBERON:0005256,5.39e-09,122;UBERON:0001801,1.55e-08,14;UBERON:0001456,2.49e-08,22;UBERON:0007503,6.16e-08,78;UBERON:0000486,7.92e-08,83;UBERON:0001048,1.02e-07,160;UBERON:0001134,1.02e-07,62;UBERON:0002036,1.02e-07,62;UBERON:0003082,1.02e-07,62;UBERON:0002385,1.15e-07,64;UBERON:0001015,1.15e-07,64;UBERON:0000383,1.15e-07,64;UBERON:0002329,1.34e-07,71;UBERON:0003059,1.34e-07,71;UBERON:0007282,1.34e-07,71;UBERON:0004290,1.34e-07,71;UBERON:0009618,1.34e-07,71;UBERON:0003077,2.53e-07,72;UBERON:0007285,2.53e-07,72;UBERON:0003102,3.20e-07,99;UBERON:0001444,3.27e-07,49;UBERON:0007524,4.65e-07,73;UBERON:0000033,5.26e-07,56;UBERON:0003104,5.91e-07,160;UBERON:0009142,5.91e-07,160 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0,2.94880723801811,1.39560233594486,3.05817920982241,2.11013582582763,1.23766352960047,0,2.01697543935533,1.80808358407193,0.730310090387373,2.92759679274304,4.30923703268758,6.5280221198161,1.88072832886853,0.85870796139317,2.46373965131192,2.63639543149086,0,0,0,0,0,0.309632246632152,3.67768489791571,3.0120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,1.02290049474824,6.14446559053763,3.00802746381534,4.77993512570718,3.1811437882044,5.35298357332899,9.45348171640679,12.195116860441,7.72946114099509,1.44076983047484,6.9216104775583,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,8.28578699070815,0,1.39293562831038,1.19168262731897,1.14734648299525,1.77334191099179,2.24271040056923,5.33744978648525,1.97334038733728,0.933633106199299,0,0.163461903113459,0,0,0.70296429550139,1.87296046098192,0,1.04614076386261,0.587172493218824,0.485618833104395,0.280901613404497,0.204154171254893,0.982674538494144,0.206651562351531,1.18800285728205,1.48360157567134,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.877955241761676,2.14541457059314,1.05166641234618,1.24775401476023,2.15267562826634,1.92201649936711,1.48352330811693,2.70081986475962,0.92747276314595,0.772921620136887,1.8611685633159,3.03797398034279,1.75386609290158,3.28163906517349,0.920498986422993,0,4.9701342952326,3.92933183087797,4.23901480776219,11.7889120429611,8.72787585890671,4.87567812161307,0.609868530647977,0.927708378250397,0.929551542956147,1.34759371519982,1.7662459561294,1.09493207722749,4.69348596989448,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,7.01208869017229,9.8777762719536,8.82052268313252,0,0,0,0,0.245976877086227,5.31860211925429,4.06076056011915,3.37205259772859,1.80952150340936,4.44424536760942,1.95484983186195,1.03993478527958,8.6598805215164,2.66639931442677,1.17408694235822,0.144366447761074,0,0,0,0,0,0,0,0,9.07103492273841,5.10390350072591,1.70161193135412,2.90633938513962,8.43441894163465,0,0,0.621984346622316,0.720599767084807,0.50496973370552,1.90493682876507,4.20187268114105,3.51652341630141,0,1.23392991243988,8.70994867747361,3.14409075893636,3.25180144601546,0.87192013766656,2.3468251462704,10.8588241236533,0,12.67954128834,0.797814349754612,0,1.28603687131071,1.41849132023278,2.39779961114489,1.71573592389777,1.62786481617433,0.823240336780769,11.4007664502807,2.13235169245527,1.58390374586686,24.4165895418265,29.63213759241,24.593355830786,0,0,0,0.479249710983165,0,1.42636905040718,0.579125226670317,0.410952645100767,0.716243852959582,0,0,0,0,0.508189248444927,0,0.773288812777695,2.01019518401218,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,2.07970861530807,2.67643483195743,0.788512075169673,1.40569697991256,0.601892199455438,0,3.10419213877515,1.99267679560631,4.79359838208428,1.91143951829782,0.979005787313703,2.05886054286514,0,0,0,2.42502057157008,0,1.5119514666484,0,0.920771839728375,2.52594084989766,0.896974044789907,2.04682899626681,1.44768529029247,1.48418066444991,6.63101683351419,4.97172830876756,3.94210348866284,1.55776328755086,6.50778119375772,0.483437798366489,4.0101294060657,1.56537681191024,2.87036120411517,0.728364672026868,3.54035920390445,1.35359883872224,0.308061348417659,5.49044838423799,0,1.79437769117889,0,0.170093705276516,1.0795795805107,0,4.87703587578935,13.0439341202262,1.27438136522519,0,3.80587083027703,0,0,37.1852681418764,33.7855085070697,28.3079203357944,2.57602529119306,0,0,4.59412430396938,5.20048196829217,1.6068392984416,5.12354806948246,2.61882649094895,2.76306614507033,1.37836572484531,2.47066563197029,2.46528379654188,2.64202544989913,6.23224249527162,1.32227932288782,0.576570202095319,3.1903178123646,1.11273558941105,0,2.83331112147576,2.7881490806424,0.308033580176089,0.532306030317022,2.60979897622522,0.9266210955196,0.715624433709956,1.86079184679834,1.58189712359363,5.71890581771475,7.67693373934002,2.1396949401696,0.95460974377781,1.56989728039846,1.07923474549989,3.0199073270966,2.82749765629647,1.2130948894399,0,2.10629228119491,12.1908434772398,0.243713489631284,1.05650146756755,1.09199929126389,3.39373036688911,0,2.2054613741845,0.66343897524122,0,4.05142873986681,1.9676842561399,4.66693867014219,4.957175969596,2.53526042279017,2.86822704408103,2.65272410735427,2.85336841185,8.51426553769435,1.47775344708365,0.658589785919804,1.89736586882858,1.74967360122491,1.92444225451024,3.35151137767894,3.26672954583968,2.63602642174982,0,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,2.88424992044177,0,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543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| |||
|short_description=p1@ARSI | |||
}} |
Latest revision as of 03:56, 16 September 2015
Short description: | p1@ARSI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARSI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000328668, NM_001012301, uc003lrv.2_5end |
EntrezGene: | ARSI |
HGNC: | 32521 |
UniProt: | Q5FYB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.37e-16 | 250 |
muscle cell | 3.10e-10 | 55 |
muscle precursor cell | 4.60e-09 | 58 |
myoblast | 4.60e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.60e-09 | 58 |
electrically responsive cell | 1.24e-08 | 61 |
electrically active cell | 1.24e-08 | 61 |
ecto-epithelial cell | 1.30e-08 | 34 |
columnar/cuboidal epithelial cell | 1.66e-08 | 27 |
ectodermal cell | 2.47e-08 | 72 |
smooth muscle cell | 5.38e-07 | 43 |
smooth muscle myoblast | 5.38e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.92e-07 | 14 |