FFCP PHASE1:Mm9::chr17:27693922..27693934,+: Difference between revisions
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{{FFCP|EntrezGene=111241,15361|HGNC=|MCL_coexpression_id=1877|UniProt=P17095|association_with_transcript=309bp_to_ENSMUST00000117254,ENSMUST00000118570_5end|description=CAGE_peak_10_at_Hmga1-rs1_5end,CAGE_peak_11_at_Hmga1_5end|id=chr17:27693922..27693934,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,3.83e-17,19;CL:0000988,4.73e-13,32;CL:0002032,4.73e-13,32;CL:0000037,4.73e-13,32;CL:0000837,4.73e-13,32;CL:0000557,5.87e-13,7;CL:0000763,2.67e-12,16;CL:0002320,1.28e-11,46;CL:0000134,1.28e-11,46;CL:0000219,4.42e-10,54;CL:0000839,8.08e-08,13;CL:0002194,1.49e-07,4;CL:0000766,1.49e-07,4;CL:0000234,1.49e-07,4;CL:0000576,1.49e-07,4;CL:0000235,1.49e-07,4;CL:0000864,1.49e-07,4;CL:0002009,1.49e-07,4;CL:0000040,1.49e-07,4;CL:0000559,1.49e-07,4;CL:0002092,9.25e-07,3;CL:0002540,9.25e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.09e-11!70;UBERON:0002193!3.28e-09!48;UBERON:0002371!4.35e-09!16;UBERON:0001474!1.74e-08!22;UBERON:0004765!1.74e-08!22;UBERON:0001434!1.74e-08!22;UBERON:0002390!3.88e-08!45;UBERON:0003061!3.88e-08!45;UBERON:0002204!3.45e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.05e-21,22;UBERON:0004765,5.05e-21,22;UBERON:0001434,5.05e-21,22;UBERON:0002371,6.50e-21,16;UBERON:0002204,2.82e-20,32;UBERON:0002193,6.31e-13,48;UBERON:0002405,6.31e-13,48;UBERON:0002390,1.29e-12,45;UBERON:0003061,1.29e-12,45;UBERON:0002384,1.28e-11,46;UBERON:0002106,2.05e-09,6;UBERON:0004457,2.05e-09,6;UBERON:0000042,2.05e-09,6;UBERON:0004854,2.05e-09,6;UBERON:0009034,2.05e-09,6;UBERON:0002095,2.05e-09,6;UBERON:0004782,2.05e-09,6;UBERON:0003281,2.05e-09,6;UBERON:0009664,2.05e-09,6;UBERON:0002296,2.05e-09,6;UBERON:0005602,2.05e-09,6;UBERON:0001179,2.05e-09,6;UBERON:0006293,2.05e-09,6;UBERON:0003081,3.24e-07,87;UBERON:0003887,3.85e-07,10|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0,0,0.234064526321993,0,0.398860794976682,0.171200729931206,0,0.666219523631325,2.02475267389826,0,5.52058789376916,8.63820931716154,3.39511721438424,0.17008658030214,1.48936426801328,1.56719873483361,0.799962113967033,0.68822784320151,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0.577703239502549,0,0.612508068787107,2.92972141515835,3.1253413780952,1.57057123192139,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,3.85899993932794,0.725362142011344,0,0,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0.677689064138264,0,9.44894703145469,8.89979726310277,12.0781619540837,1.79760066311043,3.45796474789399,0.414758449233911,0.270011876663381,0.420649922702764,0,0.883474163806454,0.244981598429908,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.182975287204819,0,0.837548997004143,0,0.30559649555362,0.294628585473668,0.142371680799103,0,1.21161909333094,0.453429360640713,0,0,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0.506719730950197,0,0.45673551887624,6.99132285847364,0.593768556259299,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,3.5384422077995,1.29413479957927,2.20841518460394,0.484875253135222,0,0.878342391034642,0.209446706813455,0.255457055208591,14.2579998162045,13.197860081855,17.1544806548637,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.509196819251581,1.61729061793121,0.505445516867349,0.210441855886474,0.390361328888111,0,0,0.60281927134286,0.612328492361951,0.384341160854549,0.187403449119458,0.517406741478031,0,0.756424320671277,0.175951124163949,0.219195732427575,0,0,0,0,15.4486901208912,14.9261786126535,14.2081749697796,0.207125772535502,0.938104239924385,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.486412857275134,0,0.219550115291051,0.402619256281115,0.210289948564127,0.720332286654991,0,0.264450566663544,0,0.696710015581316,0.128867461322093,0.201683524623343,0,0.760902504450237,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.779856348476481,0.898819408654221,0.432276099749388,0,0,0.228497025219458,0,0,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0.370191491765402,0,0.500535317148282,0.786235980452812,1.12431056192427,1.21716072833102,1.68824011826692,2.03700681425136,1.15078454980324,3.08056930872567,1.64736847912849,1.43768206527355,1.48856379067401,1.24815069245824,0.757736633841335,0,0.482443521363367,1.10851914099963,0.37898282354097,0,0.169745085775188,0.469380496577004,0.335012514883631,0.714130922658041,0.585400943573396,0.630540576424764,0.44292937929755,1.2756381492599,0.163863314715738,1.03610989119537,0.578596234326046,6.03165135757089,2.71952841909355,0,0,0.80275294993896,0.703270119553219,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0.178065603667255,1.30309567482861,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=111241,15361 | |||
|HGNC= | |||
|MCL_coexpression_id=1877 | |||
|TSSclassifier=NA | |||
|UniProt=P17095 | |||
|association_with_transcript=309bp_to_ENSMUST00000117254,ENSMUST00000118570_5end | |||
|cluster_id=chr17:27693922..27693934,+ | |||
|description=CAGE_peak_10_at_Hmga1-rs1_5end,CAGE_peak_11_at_Hmga1_5end | |||
|id=chr17:27693922..27693934,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.83e-17,19;CL:0000988,4.73e-13,32;CL:0002032,4.73e-13,32;CL:0000037,4.73e-13,32;CL:0000837,4.73e-13,32;CL:0000557,5.87e-13,7;CL:0000763,2.67e-12,16;CL:0002320,1.28e-11,46;CL:0000134,1.28e-11,46;CL:0000219,4.42e-10,54;CL:0000839,8.08e-08,13;CL:0002194,1.49e-07,4;CL:0000766,1.49e-07,4;CL:0000234,1.49e-07,4;CL:0000576,1.49e-07,4;CL:0000235,1.49e-07,4;CL:0000864,1.49e-07,4;CL:0002009,1.49e-07,4;CL:0000040,1.49e-07,4;CL:0000559,1.49e-07,4;CL:0002092,9.25e-07,3;CL:0002540,9.25e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.09e-11!70;UBERON:0002193!3.28e-09!48;UBERON:0002371!4.35e-09!16;UBERON:0001474!1.74e-08!22;UBERON:0004765!1.74e-08!22;UBERON:0001434!1.74e-08!22;UBERON:0002390!3.88e-08!45;UBERON:0003061!3.88e-08!45;UBERON:0002204!3.45e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.05e-21,22;UBERON:0004765,5.05e-21,22;UBERON:0001434,5.05e-21,22;UBERON:0002371,6.50e-21,16;UBERON:0002204,2.82e-20,32;UBERON:0002193,6.31e-13,48;UBERON:0002405,6.31e-13,48;UBERON:0002390,1.29e-12,45;UBERON:0003061,1.29e-12,45;UBERON:0002384,1.28e-11,46;UBERON:0002106,2.05e-09,6;UBERON:0004457,2.05e-09,6;UBERON:0000042,2.05e-09,6;UBERON:0004854,2.05e-09,6;UBERON:0009034,2.05e-09,6;UBERON:0002095,2.05e-09,6;UBERON:0004782,2.05e-09,6;UBERON:0003281,2.05e-09,6;UBERON:0009664,2.05e-09,6;UBERON:0002296,2.05e-09,6;UBERON:0005602,2.05e-09,6;UBERON:0001179,2.05e-09,6;UBERON:0006293,2.05e-09,6;UBERON:0003081,3.24e-07,87;UBERON:0003887,3.85e-07,10 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0,0,0.234064526321993,0,0.398860794976682,0.171200729931206,0,0.666219523631325,2.02475267389826,0,5.52058789376916,8.63820931716154,3.39511721438424,0.17008658030214,1.48936426801328,1.56719873483361,0.799962113967033,0.68822784320151,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0.577703239502549,0,0.612508068787107,2.92972141515835,3.1253413780952,1.57057123192139,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,3.85899993932794,0.725362142011344,0,0,0.573066879877513,0,0.202316460859598,0,0.633831403506179,0.677689064138264,0,9.44894703145469,8.89979726310277,12.0781619540837,1.79760066311043,3.45796474789399,0.414758449233911,0.270011876663381,0.420649922702764,0,0.883474163806454,0.244981598429908,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.182975287204819,0,0.837548997004143,0,0.30559649555362,0.294628585473668,0.142371680799103,0,1.21161909333094,0.453429360640713,0,0,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0.506719730950197,0,0.45673551887624,6.99132285847364,0.593768556259299,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,3.5384422077995,1.29413479957927,2.20841518460394,0.484875253135222,0,0.878342391034642,0.209446706813455,0.255457055208591,14.2579998162045,13.197860081855,17.1544806548637,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,0.509196819251581,1.61729061793121,0.505445516867349,0.210441855886474,0.390361328888111,0,0,0.60281927134286,0.612328492361951,0.384341160854549,0.187403449119458,0.517406741478031,0,0.756424320671277,0.175951124163949,0.219195732427575,0,0,0,0,15.4486901208912,14.9261786126535,14.2081749697796,0.207125772535502,0.938104239924385,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.486412857275134,0,0.219550115291051,0.402619256281115,0.210289948564127,0.720332286654991,0,0.264450566663544,0,0.696710015581316,0.128867461322093,0.201683524623343,0,0.760902504450237,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.779856348476481,0.898819408654221,0.432276099749388,0,0,0.228497025219458,0,0,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0.370191491765402,0,0.500535317148282,0.786235980452812,1.12431056192427,1.21716072833102,1.68824011826692,2.03700681425136,1.15078454980324,3.08056930872567,1.64736847912849,1.43768206527355,1.48856379067401,1.24815069245824,0.757736633841335,0,0.482443521363367,1.10851914099963,0.37898282354097,0,0.169745085775188,0.469380496577004,0.335012514883631,0.714130922658041,0.585400943573396,0.630540576424764,0.44292937929755,1.2756381492599,0.163863314715738,1.03610989119537,0.578596234326046,6.03165135757089,2.71952841909355,0,0,0.80275294993896,0.703270119553219,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0.178065603667255,1.30309567482861,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0.535106452806212,0.164549020602121,0,0.469343416127421,0,0.220528398054962,0.49465875882444,0.645857706783622,0.120625849856312,0.358117032009409,0.492422699235184,0.291480836629851,0.741701208042039,2.22132145037209,1.23832120777933,1.29636169158798,2.26042148405629,2.32380187125743,2.28778173206523,3.73952545986482,3.07893195112048,3.17859939750175,0,0.790839983952838,0.609958401380546,0.324016022465404,0.209088296014469,0.218362563746178,0,0.41326727862668,0,0.259229946583586,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0.632022241256357,0.810900861160657,1.43795340030758,0.909445760844565,0.716106782669926,0.39736270956253,0.721172697119813,0.295379054349154,0.403865799792591,0.762068066549998,0.403304740547362,0.779663045918019,0.673482891482306,0.233753804363138,0.453460767230423,0,0.179427713218951,0.167884616364078,0.579568782096571,0.750729901804728,0.36630324853453,0.428736758158132,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,0.207574695168353,0.798049746802062,0.682934423016537,0.243106717068294,1.04806581313991,0.735374033800057,0.666740183404846,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0.463537303779422,0,0.824171801606613,0.441596760403192,0.342869252385415,0,0.238436189947321,0.436039249896986,0.470546902076653,0.169229215783353,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.578719832943424,0,0.467863216890817,0.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| |||
|short_description=p10@Hmga1-rs1,p11@Hmga1 | |||
}} |
Latest revision as of 03:40, 26 September 2015
Short description: | p10@Hmga1-rs1, p11@Hmga1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Hmga1-rs1_5end, CAGE_peak_11_at_Hmga1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1877 |
Association with transcript: | 309bp_to_ENSMUST00000117254, ENSMUST00000118570_5end |
EntrezGene: | 111241,15361 |
Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.83e-17 | 19 |
hematopoietic cell | 4.73e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.73e-13 | 32 |
hematopoietic stem cell | 4.73e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.73e-13 | 32 |
granulocyte monocyte progenitor cell | 5.87e-13 | 7 |
myeloid cell | 2.67e-12 | 16 |
connective tissue cell | 1.28e-11 | 46 |
mesenchymal cell | 1.28e-11 | 46 |
motile cell | 4.42e-10 | 54 |
myeloid lineage restricted progenitor cell | 8.08e-08 | 13 |
monopoietic cell | 1.49e-07 | 4 |
myeloid leukocyte | 1.49e-07 | 4 |
phagocyte | 1.49e-07 | 4 |
monocyte | 1.49e-07 | 4 |
macrophage | 1.49e-07 | 4 |
tissue-resident macrophage | 1.49e-07 | 4 |
macrophage dendritic cell progenitor | 1.49e-07 | 4 |
monoblast | 1.49e-07 | 4 |
promonocyte | 1.49e-07 | 4 |
bone marrow cell | 9.25e-07 | 3 |
mesenchymal stem cell of the bone marrow | 9.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.05e-21 | 22 |
skeletal element | 5.05e-21 | 22 |
skeletal system | 5.05e-21 | 22 |
bone marrow | 6.50e-21 | 16 |
musculoskeletal system | 2.82e-20 | 32 |
hemolymphoid system | 6.31e-13 | 48 |
immune system | 6.31e-13 | 48 |
hematopoietic system | 1.29e-12 | 45 |
blood island | 1.29e-12 | 45 |
connective tissue | 1.28e-11 | 46 |
spleen | 2.05e-09 | 6 |
cavity lining | 2.05e-09 | 6 |
serous membrane | 2.05e-09 | 6 |
gastrointestinal system mesentery | 2.05e-09 | 6 |
stomach region | 2.05e-09 | 6 |
mesentery | 2.05e-09 | 6 |
gastrointestinal system serosa | 2.05e-09 | 6 |
mesentery of stomach | 2.05e-09 | 6 |
gut mesentery | 2.05e-09 | 6 |
dorsal mesentery | 2.05e-09 | 6 |
dorsal mesogastrium | 2.05e-09 | 6 |
peritoneal cavity | 2.05e-09 | 6 |
spleen primordium | 2.05e-09 | 6 |
lateral plate mesoderm | 3.24e-07 | 87 |
intraembryonic coelom | 3.85e-07 | 10 |