FFCP PHASE1:Hg19::chr5:142780168..142780186,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |||
|TSSclassifier=strong | |||
|UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | |||
|association_with_transcript=217bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | |||
|cluster_id=chr5:142780168..142780186,- | |||
|description=CAGE_peak_23_at_NR3C1_5end | |||
|id=chr5:142780168..142780186,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;9.33e-11;3!CL:0002568;4.02e-09;1!CL:0000511;1.09e-08;1!CL:0002625;1.09e-08;1!CL:0000216;1.09e-08;1!CL:0002591;1.09e-08;1!CL:0002595;8.65e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,9.82e-11,3;CL:0002568,3.31e-09,1;CL:0000511,6.65e-09,1;CL:0002625,6.65e-09,1;CL:0000216,6.65e-09,1;CL:0002591,1.22e-08,1;CL:0002595,9.45e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.09e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;4.29e-16;2!DOID:6193;4.02e-09;1!DOID:630;1.09e-08;1!DOID:0050177;1.09e-08;1!DOID:0050427;1.09e-08;1!DOID:3571;1.09e-08;1!DOID:2355;1.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,6.78e-16,2;DOID:6193,4.19e-09,1;DOID:630,5.28e-09,1;DOID:0050177,5.28e-09,1;DOID:0050427,5.28e-09,1;DOID:2355,1.42e-08,1;DOID:3571,1.65e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.68e-12;10!UBERON:0002363;1.09e-08;1!UBERON:0001136;1.09e-08;1!UBERON:0001343;1.09e-08;1!UBERON:0001282;1.09e-08;1!UBERON:0009842;1.09e-08;1!UBERON:0003704;1.09e-08;1!UBERON:0004910;1.09e-08;1!UBERON:0004813;1.09e-08;1!UBERON:0001171;1.09e-08;1!UBERON:0001172;1.09e-08;1!UBERON:0003834;8.65e-07;5!UBERON:0001533;8.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.52e-12,10;UBERON:0000358,1.52e-12,10;UBERON:0000307,1.52e-12,10;UBERON:0000091,1.52e-12,10;UBERON:0000087,1.52e-12,10;UBERON:0007010,1.52e-12,10;UBERON:0007806,1.52e-12,10;UBERON:0008780,1.52e-12,10;UBERON:0005728,1.52e-12,10;UBERON:0001282,6.16e-09,1;UBERON:0009842,6.16e-09,1;UBERON:0003704,6.16e-09,1;UBERON:0001171,6.16e-09,1;UBERON:0001172,6.16e-09,1;UBERON:0001136,6.65e-09,1;UBERON:0001343,6.65e-09,1;UBERON:0004910,6.65e-09,1;UBERON:0005154,6.65e-09,1;UBERON:0005295,6.65e-09,1;UBERON:0004813,6.65e-09,1;UBERON:0005297,6.65e-09,1;UBERON:0005294,6.65e-09,1;UBERON:0010141,6.65e-09,1;UBERON:0005891,6.65e-09,1;UBERON:0002363,9.74e-09,1;UBERON:0007645,9.74e-09,1;UBERON:0007647,9.74e-09,1;UBERON:0010115,9.74e-09,1;UBERON:0003498,7.70e-07,5;UBERON:0005985,7.70e-07,5;UBERON:0003834,9.45e-07,5;UBERON:0001533,9.45e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.687720651731561,0.821005894499457,0.708397031823113,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0.398927315243264,0,0.870627715885752,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0.328875809207352,0,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.662045904066094,2.0078563452417,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0,0,0.358779271377724,0,0.847727604638247,0.300091096084402,0.618315175430633,0.257640540045629,0.18611685633159,1.0126579934476,0.389748020644795,0.504867548488229,0.920498986422993,0.969876340912871,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,2.97324946242889,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0.616838775210622,0.355123450626254,0.246381468041427,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0.616067160352178,0,0,0,1.14499909393593,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0.842516912477962,0,0,1.05650146756755,0.136499911407986,0,1.13008116620243,0.551365343546124,1.32687795048244,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865615277858669,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.20453736500431,0.984678443688556,0,0,0.537063524026827,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,1.18219047581419,0.658156191461918,0,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,1.23563938946503,3.02823653565821,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,2.40780445460263,0,0.0730893170861856,0.492692742319255,0,0,0,0.137041924646751,0,0.569797163602908,0,0.160317640503067,0,0,0,0,0,0.432164393964449,0.248505071130865,0.707082103850386,0,0,0.917983958726896,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0.0984274815147488,1.1007533168552,0,0.272406812223151,0,0,0,0.2249738915515,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01980882368113,0,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0.121792598380896,0,0,1.0027595760908,0.306345576763462,0.983617892129413,0,0.886068179966986,0.488105059607853,0.500763722825999,0,0.332787154610557,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0,0.302461847526478,0.932623203496683,0.295710299979268,0,0,0,0,0,0,0.300515217994437,0,0,0,0.214821114084977,0,0.398095888698616,0,0.686791410365586,2.69399591012735,0,0.192619830407303,0.857766365499703,0,0,0.694567422971502,0.97894681802587,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0,0.172214979660816,0,0.368211900503681,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0.318004350653419,1.10406443001755,0,0,0,0.385375350578757,0,0.159633859057151,0.41023272848151,0,0.345786262321089,0,0,0.785181748008205,0.471878893390961,0,0,0,0.690359926060101,0.397832444232549,0,0.20170506870352,0,0,0.163771917510097,0,0.472763092328763,0,0.413373593002368,0.19024743058172,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.443511850813194,0.230467975111559,0.685952037749674,0.135939465953663,0.263091094251396,0.5909692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| |||
|short_description=p23@NR3C1 | |||
}} |
Latest revision as of 07:41, 25 September 2015
Short description: | p23@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 217bp_to_AB307716, AB527290, EU446477, HQ450643, HQ450644, HQ692822_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B6ZGU6F5ATB7F5ATB8F1D8N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 9.82e-11 | 3 |
mesenchymal stem cell of Wharton's jelly | 3.31e-09 | 1 |
androgen binding protein secreting cell | 6.65e-09 | 1 |
seminiferous tubule epithelial cell | 6.65e-09 | 1 |
Sertoli cell | 6.65e-09 | 1 |
smooth muscle cell of the pulmonary artery | 1.22e-08 | 1 |
smooth muscle cell of the subclavian artery | 9.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.52e-12 | 10 |
blastocyst | 1.52e-12 | 10 |
blastula | 1.52e-12 | 10 |
bilaminar disc | 1.52e-12 | 10 |
inner cell mass | 1.52e-12 | 10 |
cleaving embryo | 1.52e-12 | 10 |
connecting stalk | 1.52e-12 | 10 |
inner cell mass derived epiblast | 1.52e-12 | 10 |
extraembryonic mesoderm | 1.52e-12 | 10 |
intralobular bile duct | 6.16e-09 | 1 |
acinus | 6.16e-09 | 1 |
intrahepatic bile duct | 6.16e-09 | 1 |
portal lobule | 6.16e-09 | 1 |
hepatic acinus | 6.16e-09 | 1 |
mesothelium | 6.65e-09 | 1 |
seminiferous tubule of testis | 6.65e-09 | 1 |
epithelium of male gonad | 6.65e-09 | 1 |
epithelial cord | 6.65e-09 | 1 |
sex cord | 6.65e-09 | 1 |
seminiferous tubule epithelium | 6.65e-09 | 1 |
testis sex cord | 6.65e-09 | 1 |
genital ridge | 6.65e-09 | 1 |
primitive sex cord of indifferent gonad | 6.65e-09 | 1 |
coelomic epithelium | 6.65e-09 | 1 |
dura mater | 9.74e-09 | 1 |
future meninx | 9.74e-09 | 1 |
ectomeninx | 9.74e-09 | 1 |
future dura mater | 9.74e-09 | 1 |
heart blood vessel | 7.70e-07 | 5 |
coronary vessel | 7.70e-07 | 5 |
thoracic segment blood vessel | 9.45e-07 | 5 |
subclavian artery | 9.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 6.78e-16 | 2 |
epithelioid sarcoma | 4.19e-09 | 1 |
genetic disease | 5.28e-09 | 1 |
monogenic disease | 5.28e-09 | 1 |
xeroderma pigmentosum | 5.28e-09 | 1 |
anemia | 1.42e-08 | 1 |
liver cancer | 1.65e-08 | 1 |