FFCP PHASE1:Mm9::chr16:78301918..78302005,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13052|HGNC=|UniProt=P97792|association_with_transcript=0bp_to_ENSMUST00000114229,NM_001025192,NM_009988,uc007zsm.1,uc007zsn.1,uc007zso.1_5end|description=CAGE_peak_1_at_Cxadr_5end|id=chr16:78301918..78302005,+|ontology_enrichment_celltype=CL:0000066!3.07e-07!25;CL:0000117!3.83e-07!23;CL:0000337!3.83e-07!23|ontology_enrichment_celltype_v019_2=CL:0000066,2.17e-07,25;CL:0000117,3.76e-07,23;CL:0000337,3.76e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.37e-13!43;UBERON:0005409!3.30e-11!59;UBERON:0000481!1.98e-08!230;UBERON:0000344!7.60e-08!15;UBERON:0000025!1.10e-07!114;UBERON:0004111!2.28e-07!122;UBERON:0001242!5.46e-07!13;UBERON:0000060!5.46e-07!13;UBERON:0001262!5.46e-07!13;UBERON:0004786!5.46e-07!13;UBERON:0000922!7.72e-07!328;UBERON:0001007!9.77e-07!128;UBERON:0001555!9.77e-07!128;UBERON:0007026!9.77e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-11,31;UBERON:0005409,2.88e-09,47;UBERON:0000344,7.45e-08,15;UBERON:0000025,1.08e-07,114;UBERON:0004111,2.23e-07,122;UBERON:0001242,5.37e-07,13;UBERON:0001262,5.37e-07,13;UBERON:0004786,5.37e-07,13|phase1_expression=79.9142747052922,116.208810743907,109.654816692878,114.936400296595,136.744534275353,87.9687384818303,67.7476657727024,1.16210991097419,1.12630977721333,2.10658073689794,0.171217968225505,0,0.513602189793617,0.174840804837995,0.333109761815663,0,0,0,0.137114433605739,0,11.1406710097901,0.0992909512008853,0,65.4369009225033,88.5519824919276,113.123696930659,86.583161227974,95.4537560798488,157.909461568247,101.064082033732,89.8008568153984,0,0,0,38.9949686664221,32.748225135623,38.5880083335878,1.25559489221072,0.7813353445238,0.523523743973798,7.64700934440319,2.73218193983378,3.88408282424923,23.1650145075062,22.6070556619517,27.3484660720905,10.9534788208725,1.96222640742402,7.90870257844099,10.1103547518627,61.8739983584102,7.18762821824858,0,0.725362142011344,0.672187598284928,1.80081605225163,15.1862723167541,45.8948162126924,154.367459635873,137.008663631457,167.331490525631,13.8926258148344,45.3540346016681,0,0,0,17.0772062995491,20.3635701820424,112.39953974239,101.119447810436,113.365154168395,70.5557931477395,87.0222051349357,103.749706935066,88.6570606918686,130.529067698623,12.1127469099328,10.5980490610706,7.98753972932466,153.383752630215,170.624455318494,160.962231502039,7.2587579740359,16.3201156909187,16.8078072554491,147.903549907781,169.707043512531,155.829936709951,1.4387976733305,1.36028808192214,55.6539818307221,61.0900952656784,203.311428778617,64.7643829965381,107.213108878865,66.756006177503,24.1564402626613,0,0,0,65.0696599368264,0,0,0,62.9988929342633,75.7545997770545,92.5109734377053,35.5111865926277,2.07150306917737,2.22663208597237,10.235634279202,13.0920155674221,12.6838523490832,10.0984169170257,9.64227398512779,8.16832843642891,90.4733581907808,22.5574996795062,3.5384422077995,0.647067399789637,2.42925670306433,0.484875253135222,83.876292548155,11.1256702864388,8.3778682725382,68.7179478511111,0.11981512450592,0.599902730993408,0.762421362438388,12.1330417917906,9.15001205637253,174.408240732656,15.4703644971126,13.0414883238469,8.3115217823824,13.4660248346239,21.3862664085664,8.33526703087623,29.0631172198726,25.4634645622634,37.0843262443706,37.2441409182226,32.2311212351575,26.8254575747573,30.0721326248869,24.0853794135518,25.0183604574476,21.2136764005993,31.472926968195,26.4748512234947,19.0027214097065,10.5213951565236,10.5657954705727,10.0993128291428,15.0220959577799,16.1217756122979,0,1.02939162845886,1.42081749697796,32.7258720606093,30.4883877975425,37.0927846609691,37.8791576936336,31.679041311332,27.6138132068407,30.4619467623034,29.5100741539581,28.7242742223237,33.4056495324365,30.0426459264744,26.5095007214948,34.5031970323784,23.4918623361424,26.1702516582725,10.9350773253346,139.53865438631,90.5347465375607,46.2788491661203,25.5945900642281,22.0624838267417,31.701395485235,41.7484895970319,48.4784135581817,53.4534009376291,70.2303011085877,65.3854850254323,54.0370698920579,70.2316346305262,69.2122509272877,61.1197197884871,73.486936957396,80.6522156680187,14.2250925714811,24.9061757489209,28.1769339182701,20.5687841123767,24.6319658702885,29.0362294345919,25.6740340724485,23.4700135287567,23.3928104483648,18.5095745882701,43.2820835547237,12.8470731401392,15.7247196090562,16.4149342040943,20.2860121388503,28.7000820105376,28.7727212513004,34.5235364940973,41.6687532811841,66.7184234047038,57.5072826109418,63.2639611036456,65.5279113540577,48.2425656878983,81.9846179795139,70.919197640415,44.3407656399851,18.759649765278,21.1854469374634,19.860175035697,25.1118565668697,29.983620082085,28.5652369063216,42.7342688808579,29.6354070919639,31.447985930126,32.6882275747849,34.9028860344522,43.6893004120716,37.4641061726115,0,0,11.3105782794378,17.6599517635029,4.81651769963376,7.14991288212439,0,0.504941854408746,3.47059041357882,4.29482618726302,5.38558494331997,0.716906393857656,2.89638276307112,3.39691836946599,2.83367491172426,3.50707029493574,3.16230222357219,15.4234231882467,15.329529202493,17.6284947630583,29.8083135617044,13.0326397148303,22.5666735177937,31.0759214278376,44.4415628738184,38.4754362702032,25.986566573508,48.5747533751405,53.2362283926536,55.9841943395358,59.1785648118637,30.3395287618383,46.3841877729995,34.0347292719017,13.2771446243977,40.6938072510761,31.0460841078611,46.0824625317923,45.5764400460643,42.2734097716907,40.9727061299281,20.0946866415636,4.4587624532105,8.04961869282517,10.5853631066382,36.6047481530086,34.3919228862279,40.4096597018644,42.9740438411291,46.6160155275974,60.3365331823791,5.56275906031529,0.341741761595705,13.002372681683,3.1483069652851,0.753473828018764,0.683471138605126,0.228778173206523,1.69978429993855,1.81936888020755,2.48759952847963,38.1868247206045,37.0113112489928,35.5809067471985,47.7383606432362,44.3267187550674,45.4194132592049,39.110660451598,53.4767858542923,59.9421107143428,114.19079147007,17.3975007664339,0.56369293868419,13.6060056900021,14.3948886697675,17.3061557626202,15.4991788173277,14.3612706667161,18.0730147514461,20.4420884205002,17.9309478967966,3.8653459332161,0.288030006257865,2.21207784439725,5.87903124341476,3.90301637226344,2.20865399062252,4.29664069601955,2.58285761215644,2.04332264183947,2.51072196196781,3.23092639834072,1.600342939755,3.62974266492626,2.43644701849381,2.21287235772758,2.45441494581295,10.8830584135301,18.4248341300474,18.1221990351141,13.9344231582185,13.1368923941889,29.2784661703844,27.8390468886243,19.2931541171159,18.5581678493084,85.277528235177,81.4775668617703,77.3408943143185,89.1918016363739,19.8673930733486,19.6402413321322,29.0259675099676,22.0657389579868,19.4851235863208,24.8524949640874,12.5582690576854,31.5229649986815,31.2442498530066,26.2555254433758,19.0747977991464,19.8550989126015,30.0033082532181,28.8449080134452,35.6220322646915,26.5332072351987,32.6988296858409,32.4437307184051,34.7409992713264,33.4851547077466,34.3464104354567,31.9116773159659,36.9670999764089,37.2314795494951,35.0273015682811,30.9117732282234,31.5439712194582,30.525838659406,30.2813961233098,28.1972048266717,35.4792364165796,32.7458532540788,30.1831155240075,32.0945047954168,34.0868325753113,26.9348290395714,35.3532354010039,33.2945150429404,38.0584870147811,30.9873682371932,28.9359916471712,50.711547321403,30.8789723147939,33.7347554855828,10.9034349279241,12.7943023089319,5.10109238364927|short_description=p1@Cxadr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13052 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P97792 | |||
|association_with_transcript=0bp_to_ENSMUST00000114229,NM_001025192,NM_009988,uc007zsm.1,uc007zsn.1,uc007zso.1_5end | |||
|cluster_id=chr16:78301918..78302005,+ | |||
|description=CAGE_peak_1_at_Cxadr_5end | |||
|id=chr16:78301918..78302005,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.07e-07!25;CL:0000117!3.83e-07!23;CL:0000337!3.83e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.17e-07,25;CL:0000117,3.76e-07,23;CL:0000337,3.76e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.37e-13!43;UBERON:0005409!3.30e-11!59;UBERON:0000481!1.98e-08!230;UBERON:0000344!7.60e-08!15;UBERON:0000025!1.10e-07!114;UBERON:0004111!2.28e-07!122;UBERON:0001242!5.46e-07!13;UBERON:0000060!5.46e-07!13;UBERON:0001262!5.46e-07!13;UBERON:0004786!5.46e-07!13;UBERON:0000922!7.72e-07!328;UBERON:0001007!9.77e-07!128;UBERON:0001555!9.77e-07!128;UBERON:0007026!9.77e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.57e-11,31;UBERON:0005409,2.88e-09,47;UBERON:0000344,7.45e-08,15;UBERON:0000025,1.08e-07,114;UBERON:0004111,2.23e-07,122;UBERON:0001242,5.37e-07,13;UBERON:0001262,5.37e-07,13;UBERON:0004786,5.37e-07,13 | |||
|phase1_expression=79.9142747052922,116.208810743907,109.654816692878,114.936400296595,136.744534275353,87.9687384818303,67.7476657727024,1.16210991097419,1.12630977721333,2.10658073689794,0.171217968225505,0,0.513602189793617,0.174840804837995,0.333109761815663,0,0,0,0.137114433605739,0,11.1406710097901,0.0992909512008853,0,65.4369009225033,88.5519824919276,113.123696930659,86.583161227974,95.4537560798488,157.909461568247,101.064082033732,89.8008568153984,0,0,0,38.9949686664221,32.748225135623,38.5880083335878,1.25559489221072,0.7813353445238,0.523523743973798,7.64700934440319,2.73218193983378,3.88408282424923,23.1650145075062,22.6070556619517,27.3484660720905,10.9534788208725,1.96222640742402,7.90870257844099,10.1103547518627,61.8739983584102,7.18762821824858,0,0.725362142011344,0.672187598284928,1.80081605225163,15.1862723167541,45.8948162126924,154.367459635873,137.008663631457,167.331490525631,13.8926258148344,45.3540346016681,0,0,0,17.0772062995491,20.3635701820424,112.39953974239,101.119447810436,113.365154168395,70.5557931477395,87.0222051349357,103.749706935066,88.6570606918686,130.529067698623,12.1127469099328,10.5980490610706,7.98753972932466,153.383752630215,170.624455318494,160.962231502039,7.2587579740359,16.3201156909187,16.8078072554491,147.903549907781,169.707043512531,155.829936709951,1.4387976733305,1.36028808192214,55.6539818307221,61.0900952656784,203.311428778617,64.7643829965381,107.213108878865,66.756006177503,24.1564402626613,0,0,0,65.0696599368264,0,0,0,62.9988929342633,75.7545997770545,92.5109734377053,35.5111865926277,2.07150306917737,2.22663208597237,10.235634279202,13.0920155674221,12.6838523490832,10.0984169170257,9.64227398512779,8.16832843642891,90.4733581907808,22.5574996795062,3.5384422077995,0.647067399789637,2.42925670306433,0.484875253135222,83.876292548155,11.1256702864388,8.3778682725382,68.7179478511111,0.11981512450592,0.599902730993408,0.762421362438388,12.1330417917906,9.15001205637253,174.408240732656,15.4703644971126,13.0414883238469,8.3115217823824,13.4660248346239,21.3862664085664,8.33526703087623,29.0631172198726,25.4634645622634,37.0843262443706,37.2441409182226,32.2311212351575,26.8254575747573,30.0721326248869,24.0853794135518,25.0183604574476,21.2136764005993,31.472926968195,26.4748512234947,19.0027214097065,10.5213951565236,10.5657954705727,10.0993128291428,15.0220959577799,16.1217756122979,0,1.02939162845886,1.42081749697796,32.7258720606093,30.4883877975425,37.0927846609691,37.8791576936336,31.679041311332,27.6138132068407,30.4619467623034,29.5100741539581,28.7242742223237,33.4056495324365,30.0426459264744,26.5095007214948,34.5031970323784,23.4918623361424,26.1702516582725,10.9350773253346,139.53865438631,90.5347465375607,46.2788491661203,25.5945900642281,22.0624838267417,31.701395485235,41.7484895970319,48.4784135581817,53.4534009376291,70.2303011085877,65.3854850254323,54.0370698920579,70.2316346305262,69.2122509272877,61.1197197884871,73.486936957396,80.6522156680187,14.2250925714811,24.9061757489209,28.1769339182701,20.5687841123767,24.6319658702885,29.0362294345919,25.6740340724485,23.4700135287567,23.3928104483648,18.5095745882701,43.2820835547237,12.8470731401392,15.7247196090562,16.4149342040943,20.2860121388503,28.7000820105376,28.7727212513004,34.5235364940973,41.6687532811841,66.7184234047038,57.5072826109418,63.2639611036456,65.5279113540577,48.2425656878983,81.9846179795139,70.919197640415,44.3407656399851,18.759649765278,21.1854469374634,19.860175035697,25.1118565668697,29.983620082085,28.5652369063216,42.7342688808579,29.6354070919639,31.447985930126,32.6882275747849,34.9028860344522,43.6893004120716,37.4641061726115,0,0,11.3105782794378,17.6599517635029,4.81651769963376,7.14991288212439,0,0.504941854408746,3.47059041357882,4.29482618726302,5.38558494331997,0.716906393857656,2.89638276307112,3.39691836946599,2.83367491172426,3.50707029493574,3.16230222357219,15.4234231882467,15.329529202493,17.6284947630583,29.8083135617044,13.0326397148303,22.5666735177937,31.0759214278376,44.4415628738184,38.4754362702032,25.986566573508,48.5747533751405,53.2362283926536,55.9841943395358,59.1785648118637,30.3395287618383,46.3841877729995,34.0347292719017,13.2771446243977,40.6938072510761,31.0460841078611,46.0824625317923,45.5764400460643,42.2734097716907,40.9727061299281,20.0946866415636,4.4587624532105,8.04961869282517,10.5853631066382,36.6047481530086,34.3919228862279,40.4096597018644,42.9740438411291,46.6160155275974,60.3365331823791,5.56275906031529,0.341741761595705,13.002372681683,3.1483069652851,0.753473828018764,0.683471138605126,0.228778173206523,1.69978429993855,1.81936888020755,2.48759952847963,38.1868247206045,37.0113112489928,35.5809067471985,47.7383606432362,44.3267187550674,45.4194132592049,39.110660451598,53.4767858542923,59.9421107143428,114.19079147007,17.3975007664339,0.56369293868419,13.6060056900021,14.3948886697675,17.3061557626202,15.4991788173277,14.3612706667161,18.0730147514461,20.4420884205002,17.9309478967966,3.8653459332161,0.288030006257865,2.21207784439725,5.87903124341476,3.90301637226344,2.20865399062252,4.29664069601955,2.58285761215644,2.04332264183947,2.51072196196781,3.23092639834072,1.600342939755,3.62974266492626,2.43644701849381,2.21287235772758,2.45441494581295,10.8830584135301,18.4248341300474,18.1221990351141,13.9344231582185,13.1368923941889,29.2784661703844,27.8390468886243,19.2931541171159,18.5581678493084,85.277528235177,81.4775668617703,77.3408943143185,89.1918016363739,19.8673930733486,19.6402413321322,29.0259675099676,22.0657389579868,19.4851235863208,24.8524949640874,12.5582690576854,31.5229649986815,31.2442498530066,26.2555254433758,19.0747977991464,19.8550989126015,30.0033082532181,28.8449080134452,35.6220322646915,26.5332072351987,32.6988296858409,32.4437307184051,34.7409992713264,33.4851547077466,34.3464104354567,31.9116773159659,36.9670999764089,37.2314795494951,35.0273015682811,30.9117732282234,31.5439712194582,30.525838659406,30.2813961233098,28.1972048266717,35.4792364165796,32.7458532540788,30.1831155240075,32.0945047954168,34.0868325753113,26.9348290395714,35.3532354010039,33.2945150429404,38.0584870147811,30.9873682371932,28.9359916471712,50.711547321403,30.8789723147939,33.7347554855828,10.9034349279241,12.7943023089319,5.10109238364927 | |||
|short_description=p1@Cxadr | |||
}} |
Latest revision as of 18:37, 25 September 2015
Short description: | p1@Cxadr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cxadr_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000114229, NM_001025192, NM_009988, uc007zsm.1, uc007zsn.1, uc007zso.1_5end |
EntrezGene: | Cxadr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.17e-07 | 25 |
CNS neuron (sensu Vertebrata) | 3.76e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.76e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.57e-11 | 31 |
gastrointestinal system | 2.88e-09 | 47 |
mucosa | 7.45e-08 | 15 |
tube | 1.08e-07 | 114 |
anatomical conduit | 2.23e-07 | 122 |
intestinal mucosa | 5.37e-07 | 13 |
wall of intestine | 5.37e-07 | 13 |
gastrointestinal system mucosa | 5.37e-07 | 13 |