FFCP PHASE1:Hg19::chr5:130545735..130545751,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:130545735..130545751,+ | |||
|coexpression_cluster_id=C650 | |||
|description=CAGE_peak_at_chr5:130545735..130545751,+ | |||
|id=chr5:130545735..130545751,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.42e-35!53;CL:0000051!3.42e-35!53;CL:0000838!6.33e-34!52;CL:0000945!1.21e-30!24;CL:0000826!1.21e-30!24;CL:0000738!9.13e-30!140;CL:0002087!4.33e-27!119;CL:0000037!1.29e-22!172;CL:0000566!1.29e-22!172;CL:0002031!1.46e-20!124;CL:0000988!3.85e-20!182;CL:0000236!5.06e-20!14;CL:0002032!8.03e-18!165;CL:0000837!8.03e-18!165;CL:0000624!6.11e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.05e-58;24!CL:0000236;5.29e-33;13!CL:0000542;1.02e-27;53!CL:0000784;2.27e-09;3!CL:0000226;7.98e-09;3!CL:0000842;7.98e-09;3!CL:0000623;2.79e-08;3!CL:0002087;3.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.08e-58,24;CL:0000826,6.08e-58,24;CL:0000542,6.06e-46,53;CL:0000051,6.06e-46,53;CL:0000838,1.17e-43,52;CL:0000236,2.35e-35,14;CL:0000738,6.71e-27,136;CL:0002087,2.08e-23,115;CL:0000037,1.02e-19,168;CL:0000988,3.57e-18,177;CL:0002031,1.75e-16,120;CL:0002032,4.65e-14,161;CL:0000837,4.65e-14,161;CL:0000784,2.34e-09,3;CL:0000226,5.64e-09,3;CL:0000842,5.64e-09,3;CL:0000623,3.68e-08,3;CL:0000825,3.68e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.02e-27;53!UBERON:0004872;3.72e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!9.40e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.61e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.08e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.59e-16!115;UBERON:0000178!4.62e-12!15;UBERON:0000179!4.62e-12!15;UBERON:0000463!4.62e-12!15;UBERON:0002390!1.63e-07!102;UBERON:0003061!1.63e-07!102;UBERON:0002193!2.82e-07!112;UBERON:0004177!3.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.23e-24;15!UBERON:0000179;3.23e-24;15!UBERON:0000463;3.23e-24;15!UBERON:0002390;1.17e-17;32!UBERON:0002193;4.94e-12;42!UBERON:0002106;6.21e-10;3!UBERON:0004177;7.89e-10;5!UBERON:0005057;7.89e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.13e-24,15;UBERON:0000179,2.13e-24,15;UBERON:0000463,2.13e-24,15;UBERON:0002106,6.12e-10,3;UBERON:0004854,6.12e-10,3;UBERON:0009034,6.12e-10,3;UBERON:0002095,6.12e-10,3;UBERON:0004782,6.12e-10,3;UBERON:0003281,6.12e-10,3;UBERON:0009664,6.12e-10,3;UBERON:0002296,6.12e-10,3;UBERON:0005602,6.12e-10,3;UBERON:0001179,6.12e-10,3;UBERON:0006293,6.12e-10,3;UBERON:0004177,5.54e-07,7;UBERON:0005057,5.54e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.134255026066,59.2766255828608,67.2190072418821,0,2.30297638858328,0.619264493264304,0,0,0,2.78881922089086,24.8796156852988,0.293600439334847,0,0.200544447470142,0,0,0.647787332037959,0,0,0.377875943688809,0,0,0,0.309706370895104,0.28769239232215,0.768482119587302,0,0,0,0,0,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0,0.598390972864896,0,0,0.56738522469114,0.622822248995575,0,2.60741459210101,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,28.1593991138116,40.4142572333977,57.8181015011311,36.6987991407196,42.0415786387813,51.7277195959035,43.6289616038009,53.4270102539804,108.719677099905,72.2301742926255,96.3328534875577,0,2.80254281490768,0.790152254325231,1.37696839079683,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0.128091319725675,0.390178042679635,0,0.552700035571697,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,2.01606743224732,1.60464117470104,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76981248610684,6.29194401858141,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.50939302401662,1.02674429023799,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99627275756373,2.80428461064202,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,4.58782324285425,1.70894156152249,6.19402616190251,9.04997000789627,3.24236655596359,3.24018862342869,3.17250070517708,0,0,0,17.0938921115661,0.144269212976445,0,0.318852545457645,0,0,0,0.324621940274555,0,0,0.626719583092093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,8.28851746593443,0.251932747854276,0,14.8932614607894,0,0,0,0,2.86065876347107,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,7.33236173920351,0,0,0,0.404406797884062,0,0,9.85255861764596,0,0,0,2.41981432097328,0.91821828489147,0.379119477770928,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,20.6602930240514,1.59045937961861,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78602152549833,0.828478110694391,8.43482237080316,0.395223263795889,64.7936623386366,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,1.51243017733031,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,1.09394961803644,1.09651553371436,0,0,0,0,0.336283722218824,0.606965604236632,1.36597314810779,0,2.18944576355981,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,11.2780701575824,13.2138670345833,40.9758739292209,0,0,0,0,4.12856355064087,0,0,0.135982980381829,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.476128862927481,0.710478008196067,2.04846557176331,0,0.0636471582781649,0.808468755832877,0.217716747896961,0,6.93726146050251,0.502055437748735,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,7.04458277568592,16.9901300920713 | |||
|short_description=p@chr5:130545735..130545751,+ | |||
}} |
Latest revision as of 09:25, 30 July 2015
Short description: | p@chr5:130545735..130545751, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:130545735..130545751, + |
Coexpression cluster: | C650_CD19_B_lymphoma_xeroderma_splenic_Burkitt_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.08e-58 | 24 |
pro-B cell | 6.08e-58 | 24 |
lymphocyte | 6.06e-46 | 53 |
common lymphoid progenitor | 6.06e-46 | 53 |
lymphoid lineage restricted progenitor cell | 1.17e-43 | 52 |
B cell | 2.35e-35 | 14 |
leukocyte | 6.71e-27 | 136 |
nongranular leukocyte | 2.08e-23 | 115 |
hematopoietic stem cell | 1.02e-19 | 168 |
hematopoietic cell | 3.57e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 1.75e-16 | 120 |
hematopoietic oligopotent progenitor cell | 4.65e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.65e-14 | 161 |
plasmacytoid dendritic cell | 2.34e-09 | 3 |
single nucleate cell | 5.64e-09 | 3 |
mononuclear cell | 5.64e-09 | 3 |
natural killer cell | 3.68e-08 | 3 |
pro-NK cell | 3.68e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.13e-24 | 15 |
haemolymphatic fluid | 2.13e-24 | 15 |
organism substance | 2.13e-24 | 15 |
spleen | 6.12e-10 | 3 |
gastrointestinal system mesentery | 6.12e-10 | 3 |
stomach region | 6.12e-10 | 3 |
mesentery | 6.12e-10 | 3 |
gastrointestinal system serosa | 6.12e-10 | 3 |
mesentery of stomach | 6.12e-10 | 3 |
gut mesentery | 6.12e-10 | 3 |
dorsal mesentery | 6.12e-10 | 3 |
dorsal mesogastrium | 6.12e-10 | 3 |
peritoneal cavity | 6.12e-10 | 3 |
spleen primordium | 6.12e-10 | 3 |
hemopoietic organ | 5.54e-07 | 7 |
immune organ | 5.54e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.08e-14 | 10 |