FFCP PHASE1:Mm9::chr16:58508014..58508031,-: Difference between revisions
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{{FFCP|EntrezGene=54613|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=-3bp_to_ENSMUST00000137850_5end|description=CAGE_peak_20_at_St3gal6_5end|id=chr16:58508014..58508031,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.74e-16,6;CL:0000556,1.74e-16,6;CL:0000050,4.50e-11,9;CL:0000839,1.01e-07,13;CL:0000945,2.11e-07,1;CL:0000236,2.11e-07,1;CL:0000826,2.11e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.77e-12!48;UBERON:0002390!2.42e-11!45;UBERON:0003061!2.42e-11!45;UBERON:0002405!1.92e-10!70;UBERON:0004177!8.55e-10!29;UBERON:0002106!2.29e-07!6;UBERON:0004457!2.29e-07!6;UBERON:0000042!2.29e-07!6;UBERON:0004854!2.29e-07!6;UBERON:0009034!2.29e-07!6;UBERON:0002095!2.29e-07!6;UBERON:0004782!2.29e-07!6;UBERON:0003281!2.29e-07!6;UBERON:0009664!2.29e-07!6;UBERON:0002296!2.29e-07!6;UBERON:0005602!2.29e-07!6;UBERON:0001179!2.29e-07!6;UBERON:0006293!2.29e-07!6;UBERON:0005057!2.37e-07!51;UBERON:0003081!4.45e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-09,16;UBERON:0002193,4.46e-09,48;UBERON:0002405,4.46e-09,48;UBERON:0002390,1.18e-07,45;UBERON:0003061,1.18e-07,45;UBERON:0000029,1.83e-07,1;UBERON:0001097,1.83e-07,1;UBERON:0003968,1.83e-07,1;UBERON:0001467,1.83e-07,1;UBERON:0001474,9.51e-07,22;UBERON:0004765,9.51e-07,22;UBERON:0001434,9.51e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0,0.159544317990673,0,0.0874204024189974,0.666219523631325,1.01237633694913,0,13.5648731104042,9.87223921961319,8.06340338416257,0,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21465206048266,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.25026074212081,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.766371165625774,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0.50925170356284,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,1.66277871149944,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.578596234326046,0,0,0.983528546038072,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,1.87957968877638,0.206386867963223,0.740778109478847,0.376736914009382,0.956859594047176,2.0590035588587,1.35982743995084,1.11961161858926,1.38199973804424,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0.403865799792591,0.228620419965,0.403304740547362,1.26695244961678,0.192423683280659,0.818138315270983,0,0,0,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.463735671240843|short_description=p20@St3gal6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54613 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENSMUST00000137850_5end | |||
|cluster_id=chr16:58508014..58508031,- | |||
|description=CAGE_peak_20_at_St3gal6_5end | |||
|id=chr16:58508014..58508031,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.74e-16,6;CL:0000556,1.74e-16,6;CL:0000050,4.50e-11,9;CL:0000839,1.01e-07,13;CL:0000945,2.11e-07,1;CL:0000236,2.11e-07,1;CL:0000826,2.11e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.77e-12!48;UBERON:0002390!2.42e-11!45;UBERON:0003061!2.42e-11!45;UBERON:0002405!1.92e-10!70;UBERON:0004177!8.55e-10!29;UBERON:0002106!2.29e-07!6;UBERON:0004457!2.29e-07!6;UBERON:0000042!2.29e-07!6;UBERON:0004854!2.29e-07!6;UBERON:0009034!2.29e-07!6;UBERON:0002095!2.29e-07!6;UBERON:0004782!2.29e-07!6;UBERON:0003281!2.29e-07!6;UBERON:0009664!2.29e-07!6;UBERON:0002296!2.29e-07!6;UBERON:0005602!2.29e-07!6;UBERON:0001179!2.29e-07!6;UBERON:0006293!2.29e-07!6;UBERON:0005057!2.37e-07!51;UBERON:0003081!4.45e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-09,16;UBERON:0002193,4.46e-09,48;UBERON:0002405,4.46e-09,48;UBERON:0002390,1.18e-07,45;UBERON:0003061,1.18e-07,45;UBERON:0000029,1.83e-07,1;UBERON:0001097,1.83e-07,1;UBERON:0003968,1.83e-07,1;UBERON:0001467,1.83e-07,1;UBERON:0001474,9.51e-07,22;UBERON:0004765,9.51e-07,22;UBERON:0001434,9.51e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0,0.159544317990673,0,0.0874204024189974,0.666219523631325,1.01237633694913,0,13.5648731104042,9.87223921961319,8.06340338416257,0,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21465206048266,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.25026074212081,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.766371165625774,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0.50925170356284,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,1.66277871149944,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.578596234326046,0,0,0.983528546038072,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,1.87957968877638,0.206386867963223,0.740778109478847,0.376736914009382,0.956859594047176,2.0590035588587,1.35982743995084,1.11961161858926,1.38199973804424,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0.403865799792591,0.228620419965,0.403304740547362,1.26695244961678,0.192423683280659,0.818138315270983,0,0,0,0,0.19318959403219,0,0.549454872801795,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.463735671240843 | |||
|short_description=p20@St3gal6 | |||
}} |
Latest revision as of 16:45, 25 September 2015
Short description: | p20@St3gal6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_St3gal6_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -3bp_to_ENSMUST00000137850_5end |
EntrezGene: | St3gal6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.74e-16 | 6 |
megakaryocyte | 1.74e-16 | 6 |
megakaryocyte-erythroid progenitor cell | 4.50e-11 | 9 |
myeloid lineage restricted progenitor cell | 1.01e-07 | 13 |
lymphocyte of B lineage | 2.11e-07 | 1 |
B cell | 2.11e-07 | 1 |
pro-B cell | 2.11e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-09 | 16 |
hemolymphoid system | 4.46e-09 | 48 |
immune system | 4.46e-09 | 48 |
hematopoietic system | 1.18e-07 | 45 |
blood island | 1.18e-07 | 45 |
lymph node | 1.83e-07 | 1 |
axillary lymph node | 1.83e-07 | 1 |
peripheral lymph node | 1.83e-07 | 1 |
shoulder | 1.83e-07 | 1 |
bone element | 9.51e-07 | 22 |
skeletal element | 9.51e-07 | 22 |
skeletal system | 9.51e-07 | 22 |