FFCP PHASE1:Hg19::chr5:125758779..125758805,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=strong | |||
|UniProt=Q96HH9,E9PD09 | |||
|association_with_transcript=-32bp_to_ENST00000285689,ENST00000515200_5end | |||
|cluster_id=chr5:125758779..125758805,+ | |||
|description=CAGE_peak_8_at_GRAMD3_5end | |||
|id=chr5:125758779..125758805,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;7.08e-07;6!CL:0000098;7.08e-07;6!CL:0002167;7.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.29e-07,6;CL:0000098,8.29e-07,6;CL:0002167,8.29e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.83e-15!57;UBERON:0005068!9.83e-15!57;UBERON:0006241!9.83e-15!57;UBERON:0007135!9.83e-15!57;UBERON:0002616!7.56e-14!59;UBERON:0007023!6.84e-12!115;UBERON:0000955!3.83e-11!69;UBERON:0006238!3.83e-11!69;UBERON:0003080!4.39e-11!42;UBERON:0002780!7.30e-11!41;UBERON:0001890!7.30e-11!41;UBERON:0006240!7.30e-11!41;UBERON:0001017!2.82e-09!82;UBERON:0005743!3.90e-09!86;UBERON:0003075!1.12e-08!86;UBERON:0007284!1.12e-08!86;UBERON:0001893!2.62e-08!34;UBERON:0002020!2.75e-08!34;UBERON:0003528!2.75e-08!34;UBERON:0000073!2.78e-08!94;UBERON:0001016!2.78e-08!94;UBERON:0002791!7.08e-08!33;UBERON:0002346!1.88e-07!90;UBERON:0001869!2.90e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;2.44e-12;9!UBERON:0007245;2.44e-12;9!UBERON:0010009;2.44e-12;9!UBERON:0010011;2.44e-12;9!UBERON:0000454;2.44e-12;9!UBERON:0000125;5.92e-12;9!UBERON:0002308;5.92e-12;9!UBERON:0000073;6.65e-12;53!UBERON:0002616;6.65e-12;53!UBERON:0002780;3.58e-10;41!UBERON:0001890;3.58e-10;41!UBERON:0001893;5.18e-10;34!UBERON:0003528;9.29e-10;34!UBERON:0002020;9.29e-10;34!UBERON:0009663;1.16e-09;7!UBERON:0002791;1.49e-08;32!UBERON:0002298;1.58e-08;6!UBERON:0004457;1.80e-08;9!UBERON:0000042;1.80e-08;9!UBERON:0001869;2.06e-08;32!UBERON:0004732;7.56e-08;13!UBERON:0003688;1.95e-07;6!UBERON:0002358;1.95e-07;6!UBERON:0003684;1.95e-07;6!UBERON:0001178;1.95e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.73e-23,56;UBERON:0005068,9.73e-23,56;UBERON:0006241,9.73e-23,56;UBERON:0007135,9.73e-23,56;UBERON:0000073,3.15e-21,53;UBERON:0002616,3.15e-21,53;UBERON:0002780,1.73e-15,41;UBERON:0001890,1.73e-15,41;UBERON:0003080,1.73e-15,41;UBERON:0006240,1.73e-15,41;UBERON:0000955,4.12e-15,68;UBERON:0006238,4.12e-15,68;UBERON:0003075,3.24e-14,82;UBERON:0007284,3.24e-14,82;UBERON:0010371,8.10e-14,104;UBERON:0001017,3.62e-13,81;UBERON:0002346,4.62e-13,86;UBERON:0002420,2.33e-12,9;UBERON:0007245,2.33e-12,9;UBERON:0010009,2.33e-12,9;UBERON:0010011,2.33e-12,9;UBERON:0000454,2.33e-12,9;UBERON:0000125,5.21e-12,9;UBERON:0002308,5.21e-12,9;UBERON:0001893,5.58e-12,34;UBERON:0003528,6.13e-12,34;UBERON:0002020,6.13e-12,34;UBERON:0001016,7.94e-12,89;UBERON:0007023,9.03e-11,114;UBERON:0002791,4.05e-10,32;UBERON:0003056,5.25e-10,61;UBERON:0001869,5.85e-10,32;UBERON:0009663,1.51e-09,7;UBERON:0002298,5.46e-09,6;UBERON:0003076,1.32e-08,15;UBERON:0003057,1.32e-08,15;UBERON:0004732,2.34e-08,13;UBERON:0010314,5.96e-08,132;UBERON:0003688,2.33e-07,6;UBERON:0002358,2.33e-07,6;UBERON:0003684,2.33e-07,6;UBERON:0001178,2.33e-07,6;UBERON:0004733,3.70e-07,12;UBERON:0002028,3.70e-07,12;UBERON:0007277,3.70e-07,12 | |||
|phase1_expression=5.26867299884614,4.49611100171065,3.94672331468719,2.00146596706261,0.446961094427288,2.61701557230111,2.53299878168311,0,0.783556884599516,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.369363174230364,0,0.313454721478088,0.286235987131057,0,0.502170558379211,0.0764134057479513,0.0821005894499457,0.472264687882075,0,0.767658796194425,0.77408061658038,0.919421224478927,0,1.10926203050036,0,0,0,2.21598163412751,1.40381113229099,1.08505435357926,0.447830948479849,0.32389366601898,1.03030227053675,0.581592955118259,0.755751887377619,0,0.697287110717054,0.411167888021826,0.619412741790207,1.43846196161075,0.768482119587302,0.709446689665756,1.03423704220986,1.93645405075148,0,0,0.272906150057846,0.224723484445085,1.83650335422542,0.320929027076094,2.55734850319616,0.329851300186716,0,0.426224750532694,5.80418477257168,1.70215567407342,1.86846674698672,1.00499466102697,0.521482918420201,0.217188844705117,3.02699751316684,1.84138817993782,1.58231193720442,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0,0.32145117339416,0.285012743741249,0.59675003159727,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,0.786021525498329,0.411202997999018,1.33749196312542,2.60737813306872,1.4203434172042,3.89653456815823,2.00538822393312,1.17842362989935,1.99380505125259,2.43723477388514,0.640456598628376,0.780356085359269,0.657751618414705,0,1.15921234294021,2.52087157375503,2.1403266247177,2.09071047609954,0.679856056185397,1.14966148080576,0.68725489096526,1.01207876807801,0.95569624297229,0.651083453856419,0.950452044448374,0.752875595388864,0.76791966692651,0,0.236777252044017,0,1.81446068902259,1.06976078313403,0.579297615531196,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.724232594804119,0,0.486634870302636,0.378139268656271,0,0.175669571386252,0.0654895377488563,0,0.741568885568859,0,0,0,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,1.22031028774085,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0.993943903390637,0.25326102332916,1.72131935057184,0.286836620748814,0.709336764396714,0,1.06748995729705,0.74000264525148,0,0.134710672069688,0.653847612453835,0.605429710579726,0.576175924479999,0,0.624320153660641,0,0,0.352303495931295,0,0.140450806702248,0.408308342509787,0,0.309977343527296,1.18800285728205,1.7308685049499,0,0.718618141816238,0.336672227908132,0,0,0.877955241761676,0.919463387397059,0.300476117813194,0.226864366320042,1.61450672119976,0.85422955527427,1.69545520927649,0.300091096084402,0.618315175430633,1.28820270022815,0.930584281657949,2.53164498361899,2.72823614451356,1.26216887122057,0.828449087780694,1.93975268182574,0,0.201504196455281,0.847802961552438,1.15956511897978,0.545492241181669,0,0.121973706129595,0,0.116193942869518,0,0,0,4.69348596989448,0,2.76269842704961,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0.964044119533928,0.661763836394364,0.217879444092406,0.949082476444386,0.134831308160164,0.196221465125346,1.15424147083917,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0.925971025153221,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.141775097242386,1.25381931783988,0.290633938513962,1.15014803749563,0.492663237895943,0.44024217006613,0.207328115540772,0.144119953416961,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0.43596006883328,0.51336800074665,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.257207374262142,1.41849132023278,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0.479249710983165,0,0,1.30303176000821,0.821905290201534,0.537182889719687,0,0.788123040807709,0.431255149719035,0.385029108839245,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0.813795071099207,2.70362119990049,2.67643483195743,4.57337003598411,8.9027475394462,0.902838299183157,0,0,0,0.184369168541703,0.868836144680828,0.391602314925481,0.343143423810856,1.6541442089831,1.07857100409308,0.426910231213777,0,0,0,7.69134204238208,10.5888761568763,3.92924132206303,4.99742682097234,5.62877973973374,3.69964018630297,1.48418066444991,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0.40101294060657,2.20994373446151,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0.693138033939733,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.412164046590889,0.183138929636687,0.165018999841176,0.574265537996172,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0.322260734604821,0.870100163485371,0.170453254832202,1.51354460599453,0.495854746082934,0,1.53135254993501,0.6069466851333,0.929691098594572,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,0.572499546967965,0.372158369359667,0.316379424718726,0,0.255897791311334,0.42793898803392,0,2.35484592059769,0.359744915166629,0,0,0.606547444719948,0,0,0.48763373908959,0.974853958525138,0,0.545999645631943,0,0,0,0,1.31535265576129,0,0.655894752046633,0.202910376962704,0.92947049429925,0.281695602532241,0,0.196498082026242,0,0,1.47775344708365,2.30506425071931,0,0.349934720244983,0.48111056362756,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0,0.238231775457789,1.23408681925858,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0.355709216742071,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,1.50164227540718,0,0,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0,0,2.98244294329889,2.67271891179974,1.11308705022906,0,0,0.597743964753209,0.276283915531148,0,0.20453736500431,0,1.86623752597084,0.179736702294654,0,0,0.197286811273867,0,1.11136990144637,0.969332746095218,1.57705766875147,0,0,0.174919999992391,0.724999575434793,0,0,0.236387681767936,0,0,0.173624994933292,4.42870692906919,1.5677537021303,3.05163472634166,1.87984741883082,0.591095237907095,0.87754158861589,0.21787692703798,0.139423744278603,0.923403102045565,1.59518878185802,0.23056390438806,0.0897576444097721,0,0.638002319463839,0.457987967009312,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,0.530745387020035,0,0.296521128680622,0.123563938946503,0,3.16785325009182,0,1.40558667435203,0,0,0,0.394584402849391,0,0.30607276163049,0.821425535170343,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0,0.957651272384428,0.34945333648406,1.0319161948297,0.19351266257817,0.65780385377567,0.328461828212837,0.0969890164884194,0.176512253383001,0.225980740780532,0.274083849293502,0.596143835108969,1.51945910294109,0,0.561111741760736,0,0.19980960958213,0.144090417154106,0,0,0,0.248505071130865,0,0.135904206073614,0.104602846312333,0.305994652908965,0,1.20084057741958,2.73810757783986,0,0.429765441419957,0.262887354279314,0,0.458320848023367,0.717873024576814,0.199679000498991,0,1.11585728720936,0.335917362433631,0.360299883542404,0,0.0787831823072236,0,0,0,0.254019996197353,0.795229689809303,3.94989877723569,0,0.137539436597234,0,1.1248694577575,0,0.971992906528395,0,0.236417121897595,0.367182116944987,1.37280437475228,0,0.575745591958336,0,0.662091970365432,0,0,0.864221491201268,0,0,0.328370082997356,0.340776043570843,0.339936274560377,0.146552233678082,0,1.80996138906171,2.51241943311111,0,0,0.320362237703084,0.314408610199332,0.414239055347196,1.48849806543585,0.197611631897944,0.243585196761792,0,0,0.2506898940227,0,0,0.628216385000937,0,1.70836770862748,2.6290095448365,1.72022758707021,2.66229723688445,2.73224172942087,0,0.124980407962107,0.606596470166591,0.285465333544967,0.235265819698172,1.40500471742064,0.724605143054126,0.149254802886874,0.467426619694449,0,0.189403005275089,0.50313580350515,0.889811221596536,0.228840068396924,0.302461847526478,0,0.591420599958536,0.477890301491107,0.449803112163605,0.310525913752519,0,0,1.04349012362347,0.450772826991655,0.761610424337591,0.406870733204662,0.181848659202559,0.107410557042488,1.85613503951397,0.398095888698616,2.40016658797892,1.03018711554838,1.01024846629776,2.52369796457302,0.385239660814607,0.643324774124777,0,0.906823702049089,0.694567422971502,0.244736704506468,0.179088841081487,0,0.219284049578707,0.706756583783524,0,0.675769762612291,0.256241518587947,0,0,1.93561810612423,0,0.265729680626726,0,0,0,0,0.19998739585493,0.320075189082423,0.172214979660816,1.13503190713367,0.368211900503681,1.11903606175556,0,0,0,0,0,0,0,0.123935764259002,0.558644917973244,0.636008701306837,0,0,0,0,1.02766760154335,0,2.07524016774297,0.82046545696302,0,1.52145955421279,2.26065903884592,2.85538840518309,0.0981477185010256,0,0.366857197043358,0,0.381382095467167,0,0,0.526472298444801,0.80682027481408,0,0,0.655087670040387,0.295712172434091,1.62090203084147,1.56215619722769,1.86018116851066,0.887821342714695,0,0.548257766857182,0.496211178389294,0,0.255524855279191,0.535701835878287,1.00885116665647,0.606965604236632,1.82129753081038,0.177404740325278,0.806637912890455,0.171488009437418,1.42736439251347,0.920818829879887,0.236387681767936,1.00108261702862,0.78493092850514,1.41404030924402,0,0,0,0,1.28657779517981,0,0,0,0,0.62164849248911,0.3414369541879,0.691259661814092,0,0.591660003652827,0.0852134047591577,0,2.2910686854405,0.62041277132864,0,0.111855431797792,0,0,0,0.205325613712494,0,0,0.233939463462106,0,0.118920090777569,0.33883824611688,0,0.452888530700021,0.308696632431779,0,0,1.22574160876953,0.235676547101626,1.57046773691956,4.75274240523338,0,1.86919826156599,0.0939839179798536,0.515663103788617,0.299823467774787,0.178553938605658,0.705789743431384,0,0,0.458729283404541,2.86679166302903,0,0.883889372481891,0,0,0.743990036333503,0.924351257262837,1.73050624849516,0,0,0,0.101988829741982,0,0,0,0.454672189309436,0.267964130156178,4.97501663675268,3.93045384275202,0,0.23806443146374,0.387533459016037,0.496597714366863,0.33639558774184,0.445530107947154,0,0,0,0.26940821205835,0.215166616178029,0,0.162806537221949,1.06727345877715,0,0.359300808426348,0,0.855690109280065,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p8@GRAMD3 | |||
}} |
Latest revision as of 01:06, 20 September 2015
Short description: | p8@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GRAMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000285689, ENST00000515200_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | Q96HH9E9PD09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.29e-07 | 6 |
sensory epithelial cell | 8.29e-07 | 6 |
olfactory epithelial cell | 8.29e-07 | 6 |