FFCP PHASE1:Hg19::chr5:118668891..118668933,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z713 | |||
|association_with_transcript=21bp_to_ENST00000513374,uc011cwf.1_5end | |||
|cluster_id=chr5:118668891..118668933,+ | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_5_at_TNFAIP8_5end | |||
|id=chr5:118668891..118668933,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.91e-42!53;CL:0000051!2.91e-42!53;CL:0000838!1.82e-41!52;CL:0000738!7.27e-41!140;CL:0002087!1.66e-35!119;CL:0002031!6.96e-32!124;CL:0000037!1.30e-30!172;CL:0000566!1.30e-30!172;CL:0000988!1.14e-27!182;CL:0002032!1.31e-27!165;CL:0000837!1.31e-27!165;CL:0000945!1.08e-20!24;CL:0000826!1.08e-20!24;CL:0000084!3.07e-19!25;CL:0000827!3.07e-19!25;CL:0000791!5.96e-18!18;CL:0000789!5.96e-18!18;CL:0002420!5.96e-18!18;CL:0002419!5.96e-18!18;CL:0000790!5.96e-18!18;CL:0000236!1.34e-12!14;CL:0000625!3.27e-11!11;CL:0000624!1.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.44e-32;53!CL:0000945;5.41e-30;24!CL:0000791;1.21e-27;18!CL:0000789;1.21e-27;18!CL:0002419;1.21e-27;18!CL:0000084;9.58e-25;25!CL:0000236;2.63e-18;13!CL:0000625;6.63e-17;11!CL:0000624;4.02e-11;6!CL:0002087;6.10e-11;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.11e-59,53;CL:0000051,4.11e-59,53;CL:0000838,7.58e-58,52;CL:0002087,5.18e-30,115;CL:0000945,5.57e-30,24;CL:0000826,5.57e-30,24;CL:0000738,1.36e-29,136;CL:0000791,1.14e-27,18;CL:0000789,1.14e-27,18;CL:0002420,1.14e-27,18;CL:0002419,1.14e-27,18;CL:0000790,1.14e-27,18;CL:0000084,1.05e-24,25;CL:0000827,1.05e-24,25;CL:0002031,3.82e-24,120;CL:0000037,1.84e-20,168;CL:0000236,1.71e-19,14;CL:0002032,3.68e-19,161;CL:0000837,3.68e-19,161;CL:0000988,1.61e-18,177;CL:0000625,6.44e-17,11;CL:0000624,4.00e-11,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.44e-32;53!CL:0000790;1.21e-27;18 | |||
|ontology_enrichment_disease=DOID:0060058!2.42e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.71e-10!102;UBERON:0003061!2.71e-10!102;UBERON:0000178!5.95e-10!15;UBERON:0000179!5.95e-10!15;UBERON:0000463!5.95e-10!15;UBERON:0002193!2.25e-09!112;UBERON:0000974!4.34e-08!10;UBERON:0004177!5.24e-07!7;UBERON:0003408!9.17e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.29e-14;15!UBERON:0000179;5.29e-14;15!UBERON:0000463;5.29e-14;15!UBERON:0002390;5.62e-11;32!UBERON:0002193;1.86e-07;42!UBERON:0004177;2.02e-07;5!UBERON:0005057;2.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.17e-14,15;UBERON:0000179,5.17e-14,15;UBERON:0000463,5.17e-14,15;UBERON:0004177,3.08e-10,7;UBERON:0005057,3.08e-10,7;UBERON:0000974,1.06e-08,10;UBERON:0002370,7.29e-07,4;UBERON:0005058,7.29e-07,4;UBERON:0009113,7.29e-07,4;UBERON:0003295,7.29e-07,4;UBERON:0005562,7.29e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3657202806148,11.8224848807922,14.7976268869717,13.3743854128627,4.98978217526377,2.47705797305722,1.83884244895785,0,0,2.63388481973026,0.853015394924529,0,0.553995408531877,3.00816671205213,0.868043482863407,0.671746422719773,1.29557466407592,1.03030227053675,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0.47296445977717,0,0.645484683583826,1.35426486594342,0,0.818718450173537,0,0.918251677112708,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.81619850790011,1.47311054395026,1.58231193720442,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0.182664153764634,68.6385353399158,63.3520789064073,56.039082993404,69.9837565009072,61.2605860165099,48.2792049561766,59.4940385506376,42.9324189540914,18.7840279806118,8.22132065119314,11.0859236156316,1.32171328579026,1.68152568894461,0.263384084775077,22.6216235630908,33.7989255964282,20.3545484009514,41.4622508568882,51.1697958614737,44.0306459333302,35.068811113424,19.6082404117906,34.4688911745559,46.9651856517277,42.7870104748725,18.8294239996742,10.7949258474699,24.9945614997588,22.6607014584396,57.3810109755404,39.1476526747839,31.8373585426759,45.9956304741898,45.3237370790265,47.1361207130363,42.9534306853287,56.9294307043881,33.1308030897061,21.4857539772618,15.207232711174,29.6632984583212,34.0444385670753,32.4819889036099,25.0983887166658,18.8859439291841,3.02410114837099,2.40696176205157,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,4.90943017063502,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0.402115889646523,3.42577247086559,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,2.55195175036296,0.179117045405697,1.74380363108377,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.96681151948218,6.89607660706745,7.76259269494262,4.87703537863044,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3346740637081,7.54999702865159,8.32474950866866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81813406897076,0.192190067365106,0.893288987462089,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.229723400206959,22.8351424154476,19.1159301785594,13.6715324921799,19.7732373629965,23.0362872928269,20.1026726469742,16.2009431171434,17.4487538784739,0,0,0.735120647943095,4.83088255326869,0,0.0711418433484141,1.59426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0.16480387422676,0,0.796991953004279,11.3276405367771,0,0,14.6470918498673,0,0,0,0,2.17015492401254,11.974154617347,0,0,0,0,0,0,0.724999575434793,0.568967241427498,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,6.83176346965156,0.153900517007594,0,0,0,0,0,0,0,9.19739683761629,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.32686346755009,0.611030144933625,0,0,0.104421949505455,0.067401132980677,0,0,1.27718352450966,2.15231080825299,0,0,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,1.17590876897253,0,0.17472666824203,0,0,0,0,3.68558262655994,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,9.90677985169678,0,0,0,0,0,1.349843349309,0.77380195455795,0,0.670869375198532,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,1.28144895081234,0.78602152549833,0.828478110694391,14.3888146325466,21.9348911406718,3.77557054980777,4.46838880439127,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0,0.584580926518165,0.398594520940089,0.163565394255844,0,0,0,0.39997479170986,0,23.2490222542101,0,0,2.09819261579167,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,4.51479505104718,2.00548529691159,4.21885776599862,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0,0.177404740325278,8.75778305423922,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0.828864656652147,0.51215543128185,0,3.44181887056222,0,0,0.423387050190929,0,0,0,0,0,0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| |||
|short_description=p5@TNFAIP8 | |||
}} |
Latest revision as of 21:37, 19 September 2015
Short description: | p5@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNFAIP8_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 21bp_to_ENST00000513374, uc011cwf.1_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | B7Z713 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.11e-59 | 53 |
common lymphoid progenitor | 4.11e-59 | 53 |
lymphoid lineage restricted progenitor cell | 7.58e-58 | 52 |
nongranular leukocyte | 5.18e-30 | 115 |
lymphocyte of B lineage | 5.57e-30 | 24 |
pro-B cell | 5.57e-30 | 24 |
leukocyte | 1.36e-29 | 136 |
mature alpha-beta T cell | 1.14e-27 | 18 |
alpha-beta T cell | 1.14e-27 | 18 |
immature T cell | 1.14e-27 | 18 |
mature T cell | 1.14e-27 | 18 |
immature alpha-beta T cell | 1.14e-27 | 18 |
T cell | 1.05e-24 | 25 |
pro-T cell | 1.05e-24 | 25 |
hematopoietic lineage restricted progenitor cell | 3.82e-24 | 120 |
hematopoietic stem cell | 1.84e-20 | 168 |
B cell | 1.71e-19 | 14 |
hematopoietic oligopotent progenitor cell | 3.68e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.68e-19 | 161 |
hematopoietic cell | 1.61e-18 | 177 |
CD8-positive, alpha-beta T cell | 6.44e-17 | 11 |
CD4-positive, alpha-beta T cell | 4.00e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 5.17e-14 | 15 |
haemolymphatic fluid | 5.17e-14 | 15 |
organism substance | 5.17e-14 | 15 |
hemopoietic organ | 3.08e-10 | 7 |
immune organ | 3.08e-10 | 7 |
neck | 1.06e-08 | 10 |
thymus | 7.29e-07 | 4 |
hemolymphoid system gland | 7.29e-07 | 4 |
thymic region | 7.29e-07 | 4 |
pharyngeal gland | 7.29e-07 | 4 |
thymus primordium | 7.29e-07 | 4 |