FFCP PHASE1:Hg19::chr4:87521610..87521614,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:87521610..87521614,+ | |||
|coexpression_cluster_id=C2797 | |||
|description=CAGE_peak_at_chr4:87521610..87521614,+ | |||
|id=chr4:87521610..87521614,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.22e-08;1!CL:0000786;1.22e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.53e-08,1;CL:0000786,1.53e-08,1;CL:0000980,1.53e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.60e-11;3!UBERON:0005425;1.22e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.35e-07!143;DOID:162!7.88e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:171;1.70e-12;10!DOID:1749;1.20e-08;14!DOID:0060060;1.22e-08;1!DOID:0060061;1.22e-08;1!DOID:8691;1.22e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.16e-12,10;DOID:1749,9.16e-09,14;DOID:0060060,9.74e-09,1;DOID:0060061,9.74e-09,1;DOID:8691,9.74e-09,1;DOID:162,6.80e-08,235;DOID:14566,1.18e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.25e-13!94;UBERON:0001016!7.25e-13!94;UBERON:0001017!1.67e-11!82;UBERON:0000924!2.06e-11!173;UBERON:0006601!2.06e-11!173;UBERON:0005743!6.04e-11!86;UBERON:0002780!8.29e-11!41;UBERON:0001890!8.29e-11!41;UBERON:0006240!8.29e-11!41;UBERON:0001049!9.54e-11!57;UBERON:0005068!9.54e-11!57;UBERON:0006241!9.54e-11!57;UBERON:0007135!9.54e-11!57;UBERON:0003080!2.72e-10!42;UBERON:0000955!1.01e-09!69;UBERON:0006238!1.01e-09!69;UBERON:0004121!1.08e-09!169;UBERON:0002020!1.38e-09!34;UBERON:0003528!1.38e-09!34;UBERON:0002346!1.53e-09!90;UBERON:0007023!1.57e-09!115;UBERON:0001893!3.15e-09!34;UBERON:0002791!5.55e-09!33;UBERON:0002616!1.25e-08!59;UBERON:0001869!1.61e-08!32;UBERON:0000033!3.27e-08!123;UBERON:0000153!7.83e-08!129;UBERON:0007811!7.83e-08!129;UBERON:0003075!1.27e-07!86;UBERON:0007284!1.27e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;6.68e-31;4!UBERON:0000923;6.68e-31;4!UBERON:0010316;6.68e-31;4!UBERON:0005291;6.68e-31;4!UBERON:0002050;8.81e-25;5!UBERON:0005423;8.81e-25;5!UBERON:0000997;4.70e-09;1!UBERON:0005056;4.70e-09;1!UBERON:0004176;4.70e-09;1!UBERON:0000941;1.22e-08;1!UBERON:0001785;1.22e-08;1!UBERON:0002464;1.22e-08;1!UBERON:0004904;1.22e-08;1!UBERON:0001021;1.22e-08;1!UBERON:0003343;3.10e-08;4!UBERON:0004785;3.10e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.52e-09,1;UBERON:0005056,4.52e-09,1;UBERON:0000941,8.36e-09,1;UBERON:0001785,8.36e-09,1;UBERON:0002464,8.36e-09,1;UBERON:0004904,8.36e-09,1;UBERON:0001021,8.36e-09,1;UBERON:0003902,8.36e-09,1;UBERON:0005425,8.36e-09,1;UBERON:0003343,1.85e-08,4;UBERON:0004785,1.85e-08,4 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.547497700291537,0.125542639594803,0.764134057479513,0.246301768349837,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.527008714158756,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.491337269247072,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0.612975591598039,0,0,0.358779271377724,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.843881661206331,0.194874010322397,0.757301322732344,0.276149695926898,0.323292113637624,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0,0.243947412259191,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0,0.695068915744663,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.482561763430822,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.54941678891006,0.330037999682352,0.574265537996172,0,0,0,0,0.15350367472613,0.137836572484531,0.429680979473094,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,1.40373983744043,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0.962479855263359,1.22520107990516,0,0,0.284567373393656,0,0,0.191505370132367,0,0,0.561594356226918,0.228234679033192,0,2.50634477090067,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0.994147647766298,0.422008249231538,0.445234820091624,0.494411622680279,0,0,0.276283915531148,0.755798243562828,0,0.861593638227486,0,0.449341755736634,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0,4.95727842751532,0.347249989866585,0.885741385813839,1.32656082487949,0,0.110579259931225,0,0.438770794307945,0,0.83654246567162,0.461701551022782,0,0,0,0,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0.432777279484182,0.995261931078505,0.0884575645033392,0,0.593042257361244,0.741383633679017,0.208843899010911,0.134802265961354,0,0,0.364909578431332,0.586993856796269,0,0,0,0.61214552326098,0.442306057399416,0.150323419414493,0.207376382794494,0.664653872707185,0,0,0,0.569219092059585,0,0,3.33174151208884,0.522355239482415,0.52418000472609,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.379864775735272,0.195551382734803,0.480952921509202,0.213452994739353,0.19980960958213,0,0.114536596165916,0.686379991447858,0,0,2.35694034616795,0.271808412147228,0.209205692624666,0.509991088181609,0.288950589901519,0.600420288709789,0.958337652243951,0,0,0.525774708558629,0.279282401272254,0.687481272035051,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0.338693328263138,0,0.681017030557878,0.803765742325096,0.137539436597234,0.83088067605837,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.472834243795189,0.157363764404994,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0,0.340776043570843,0.226624183040251,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,8.992661270855,0,0.909894705249887,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0,1.03018711554838,0.336749488765919,0,0.192619830407303,0,0,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0,0.512483037175893,0,0,0.414775308455192,0,0,0.1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| |||
|short_description=p@chr4:87521610..87521614,+ | |||
}} |
Latest revision as of 07:42, 30 July 2015
Short description: | p@chr4:87521610..87521614, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:87521610..87521614, + |
Coexpression cluster: | C2797_medulloblastoma_neuroectodermal_peripheral_pineal_carcinoid_neuroepithelioma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.53e-08 | 1 |
plasma cell | 1.53e-08 | 1 |
plasmablast | 1.53e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 4.52e-09 | 1 |
external female genitalia | 4.52e-09 | 1 |
cranial nerve II | 8.36e-09 | 1 |
cranial nerve | 8.36e-09 | 1 |
nerve trunk | 8.36e-09 | 1 |
nerve connecting eye with brain | 8.36e-09 | 1 |
nerve | 8.36e-09 | 1 |
retinal neural layer | 8.36e-09 | 1 |
presumptive neural retina | 8.36e-09 | 1 |
mucosa of oral region | 1.85e-08 | 4 |
respiratory system mucosa | 1.85e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.16e-12 | 10 |
squamous cell carcinoma | 9.16e-09 | 14 |
non-Hodgkin lymphoma | 9.74e-09 | 1 |
cutaneous T cell lymphoma | 9.74e-09 | 1 |
mycosis fungoides | 9.74e-09 | 1 |
cancer | 6.80e-08 | 235 |
disease of cellular proliferation | 1.18e-07 | 239 |