FFCP PHASE1:Mm9::chr15:95358860..95358876,-: Difference between revisions
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{{FFCP|EntrezGene=54003|HGNC=|MCL_coexpression_id=1|UniProt=Q80UM5|association_with_transcript=-177bp_to_ENSMUST00000075275,uc007xjq.1_5end|description=CAGE_peak_5_at_Nell2_5end|id=chr15:95358860..95358876,-|ontology_enrichment_celltype=CL:0000540!3.56e-18!33;CL:0000047!3.56e-18!33;CL:0000031!3.56e-18!33;CL:0000404!3.56e-18!33;CL:0000117!5.27e-16!23;CL:0000337!5.27e-16!23;CL:0000393!2.91e-14!39;CL:0000211!2.91e-14!39;CL:0000221!2.96e-12!44;CL:0000133!2.96e-12!44;CL:0002319!4.04e-12!43;CL:0000055!2.18e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.16e-31,23;CL:0000337,3.16e-31,23;CL:0000540,7.39e-29,33;CL:0000047,7.39e-29,33;CL:0000031,7.39e-29,33;CL:0000404,7.39e-29,33;CL:0000393,2.06e-23,39;CL:0000211,2.06e-23,39;CL:0002319,1.24e-20,43;CL:0000221,5.12e-20,44;CL:0000133,5.12e-20,44;CL:0002609,8.75e-12,6;CL:0002321,2.92e-10,70;CL:0002608,8.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.65e-32!73;UBERON:0005743!5.65e-32!73;UBERON:0000073!1.88e-30!75;UBERON:0001016!1.88e-30!75;UBERON:0002346!1.58e-27!71;UBERON:0003075!1.58e-27!71;UBERON:0007284!1.58e-27!71;UBERON:0001049!1.86e-26!52;UBERON:0005068!1.86e-26!52;UBERON:0006241!1.86e-26!52;UBERON:0007135!1.86e-26!52;UBERON:0000033!2.38e-26!63;UBERON:0004121!4.83e-26!102;UBERON:0000924!4.83e-26!102;UBERON:0006601!4.83e-26!102;UBERON:0000955!5.38e-25!50;UBERON:0006238!5.38e-25!50;UBERON:0002616!3.32e-24!49;UBERON:0003056!6.58e-24!49;UBERON:0002020!7.96e-23!34;UBERON:0003080!1.69e-20!40;UBERON:0002780!5.81e-20!39;UBERON:0001890!5.81e-20!39;UBERON:0006240!5.81e-20!39;UBERON:0002791!7.08e-19!29;UBERON:0003528!7.08e-19!29;UBERON:0001893!7.08e-19!29;UBERON:0000956!1.59e-15!21;UBERON:0001869!1.59e-15!21;UBERON:0000203!1.59e-15!21;UBERON:0007811!1.13e-14!86;UBERON:0000153!6.36e-13!94;UBERON:0002619!3.22e-12!17;UBERON:0002021!1.71e-10!10;UBERON:0000411!1.71e-10!10;UBERON:0001950!1.71e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.85e-45,73;UBERON:0002020,1.87e-44,34;UBERON:0001016,1.42e-43,75;UBERON:0000073,2.92e-42,54;UBERON:0001049,6.04e-37,52;UBERON:0005068,6.04e-37,52;UBERON:0006241,6.04e-37,52;UBERON:0007135,6.04e-37,52;UBERON:0003528,4.71e-36,29;UBERON:0002791,4.71e-36,29;UBERON:0001893,4.71e-36,29;UBERON:0000956,7.07e-33,21;UBERON:0001869,7.07e-33,21;UBERON:0000203,7.07e-33,21;UBERON:0004121,2.71e-32,95;UBERON:0000924,2.71e-32,95;UBERON:0006601,2.71e-32,95;UBERON:0002346,4.47e-32,64;UBERON:0003075,4.47e-32,64;UBERON:0007284,4.47e-32,64;UBERON:0002780,6.11e-32,39;UBERON:0001890,6.11e-32,39;UBERON:0006240,6.11e-32,39;UBERON:0000955,1.28e-31,47;UBERON:0006238,1.28e-31,47;UBERON:0003080,5.89e-31,40;UBERON:0002616,3.83e-30,46;UBERON:0010371,5.27e-27,73;UBERON:0002619,9.50e-26,17;UBERON:0003056,6.48e-24,49;UBERON:0002021,1.34e-20,10;UBERON:0000411,1.34e-20,10;UBERON:0001950,1.34e-20,10;UBERON:0010314,1.46e-19,92;UBERON:0000025,3.89e-12,114;UBERON:0004111,8.71e-11,122;UBERON:0011216,1.30e-10,194;UBERON:0001948,2.66e-09,5;UBERON:0002315,2.66e-09,5;UBERON:0002240,1.11e-07,6;UBERON:0005174,1.11e-07,6;UBERON:0001137,1.11e-07,6;UBERON:0001954,2.33e-07,7;UBERON:0003022,2.33e-07,7;UBERON:0002421,2.33e-07,7;UBERON:0000349,2.33e-07,7;UBERON:0002600,2.33e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,2.02316460859598,5.81890077199236,1.90149421051854,0,0,0,0,0,0,0,3.83651565541367,4.72520784160917,5.04779907243317,3.14216082844184,3.3130281142742,3.55223317723367,6.13411014516713,5.51531271966013,1.10115880999389,2.80912143787413,1.99688493233117,4.2203612073662,4.29991924931325,3.12548022334056,0.279182999001381,0,1.06958773443767,5.59794312399969,2.56269025438385,2.23679334990361,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,0.748953197024114,0.915001205637253,3.39266750704734,6.08385120672968,6.90431734791892,2.28566849015516,2.75810147215188,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.720248519221397,0.753524089178575,0.544291993210623,0.768682321709099,0.655912071918102,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9350773253346,5.24813523134351,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,1.57754109708128,0.390438744296638,1.07711698866399,0.955875191810208,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,1.07021290561242,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0,0,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,11.5081309126794,5.72895513439397,6.8741272937475,7.53590771747707,6.0431511791176,8.77529250301348,4.5032120322422,7.25027854374727,7.7664046762773,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.367687016900028,1.33348036680969,0.618105171716683,0,1.01078884705519,0.760437899670719,0.754505365544305,0.561849044819294,0.448176066834085,0.287177344778066,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.715308569841963,0.872078499793971,0.564656282491984,0.676916863133412,0.548783918618318,0.526139422875686,0.407412341537585,1.12228454331548,0.711810108745045,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.749431733813838,0.701794825336225,0.644613162144895,0.382576664137687,0,0.463735671240843|short_description=p5@Nell2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54003 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80UM5 | |||
|association_with_transcript=-177bp_to_ENSMUST00000075275,uc007xjq.1_5end | |||
|cluster_id=chr15:95358860..95358876,- | |||
|description=CAGE_peak_5_at_Nell2_5end | |||
|id=chr15:95358860..95358876,- | |||
|ontology_enrichment_celltype=CL:0000540!3.56e-18!33;CL:0000047!3.56e-18!33;CL:0000031!3.56e-18!33;CL:0000404!3.56e-18!33;CL:0000117!5.27e-16!23;CL:0000337!5.27e-16!23;CL:0000393!2.91e-14!39;CL:0000211!2.91e-14!39;CL:0000221!2.96e-12!44;CL:0000133!2.96e-12!44;CL:0002319!4.04e-12!43;CL:0000055!2.18e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.16e-31,23;CL:0000337,3.16e-31,23;CL:0000540,7.39e-29,33;CL:0000047,7.39e-29,33;CL:0000031,7.39e-29,33;CL:0000404,7.39e-29,33;CL:0000393,2.06e-23,39;CL:0000211,2.06e-23,39;CL:0002319,1.24e-20,43;CL:0000221,5.12e-20,44;CL:0000133,5.12e-20,44;CL:0002609,8.75e-12,6;CL:0002321,2.92e-10,70;CL:0002608,8.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.65e-32!73;UBERON:0005743!5.65e-32!73;UBERON:0000073!1.88e-30!75;UBERON:0001016!1.88e-30!75;UBERON:0002346!1.58e-27!71;UBERON:0003075!1.58e-27!71;UBERON:0007284!1.58e-27!71;UBERON:0001049!1.86e-26!52;UBERON:0005068!1.86e-26!52;UBERON:0006241!1.86e-26!52;UBERON:0007135!1.86e-26!52;UBERON:0000033!2.38e-26!63;UBERON:0004121!4.83e-26!102;UBERON:0000924!4.83e-26!102;UBERON:0006601!4.83e-26!102;UBERON:0000955!5.38e-25!50;UBERON:0006238!5.38e-25!50;UBERON:0002616!3.32e-24!49;UBERON:0003056!6.58e-24!49;UBERON:0002020!7.96e-23!34;UBERON:0003080!1.69e-20!40;UBERON:0002780!5.81e-20!39;UBERON:0001890!5.81e-20!39;UBERON:0006240!5.81e-20!39;UBERON:0002791!7.08e-19!29;UBERON:0003528!7.08e-19!29;UBERON:0001893!7.08e-19!29;UBERON:0000956!1.59e-15!21;UBERON:0001869!1.59e-15!21;UBERON:0000203!1.59e-15!21;UBERON:0007811!1.13e-14!86;UBERON:0000153!6.36e-13!94;UBERON:0002619!3.22e-12!17;UBERON:0002021!1.71e-10!10;UBERON:0000411!1.71e-10!10;UBERON:0001950!1.71e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.85e-45,73;UBERON:0002020,1.87e-44,34;UBERON:0001016,1.42e-43,75;UBERON:0000073,2.92e-42,54;UBERON:0001049,6.04e-37,52;UBERON:0005068,6.04e-37,52;UBERON:0006241,6.04e-37,52;UBERON:0007135,6.04e-37,52;UBERON:0003528,4.71e-36,29;UBERON:0002791,4.71e-36,29;UBERON:0001893,4.71e-36,29;UBERON:0000956,7.07e-33,21;UBERON:0001869,7.07e-33,21;UBERON:0000203,7.07e-33,21;UBERON:0004121,2.71e-32,95;UBERON:0000924,2.71e-32,95;UBERON:0006601,2.71e-32,95;UBERON:0002346,4.47e-32,64;UBERON:0003075,4.47e-32,64;UBERON:0007284,4.47e-32,64;UBERON:0002780,6.11e-32,39;UBERON:0001890,6.11e-32,39;UBERON:0006240,6.11e-32,39;UBERON:0000955,1.28e-31,47;UBERON:0006238,1.28e-31,47;UBERON:0003080,5.89e-31,40;UBERON:0002616,3.83e-30,46;UBERON:0010371,5.27e-27,73;UBERON:0002619,9.50e-26,17;UBERON:0003056,6.48e-24,49;UBERON:0002021,1.34e-20,10;UBERON:0000411,1.34e-20,10;UBERON:0001950,1.34e-20,10;UBERON:0010314,1.46e-19,92;UBERON:0000025,3.89e-12,114;UBERON:0004111,8.71e-11,122;UBERON:0011216,1.30e-10,194;UBERON:0001948,2.66e-09,5;UBERON:0002315,2.66e-09,5;UBERON:0002240,1.11e-07,6;UBERON:0005174,1.11e-07,6;UBERON:0001137,1.11e-07,6;UBERON:0001954,2.33e-07,7;UBERON:0003022,2.33e-07,7;UBERON:0002421,2.33e-07,7;UBERON:0000349,2.33e-07,7;UBERON:0002600,2.33e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,2.02316460859598,5.81890077199236,1.90149421051854,0,0,0,0,0,0,0,3.83651565541367,4.72520784160917,5.04779907243317,3.14216082844184,3.3130281142742,3.55223317723367,6.13411014516713,5.51531271966013,1.10115880999389,2.80912143787413,1.99688493233117,4.2203612073662,4.29991924931325,3.12548022334056,0.279182999001381,0,1.06958773443767,5.59794312399969,2.56269025438385,2.23679334990361,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,0.748953197024114,0.915001205637253,3.39266750704734,6.08385120672968,6.90431734791892,2.28566849015516,2.75810147215188,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.720248519221397,0.753524089178575,0.544291993210623,0.768682321709099,0.655912071918102,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9350773253346,5.24813523134351,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0,1.57754109708128,0.390438744296638,1.07711698866399,0.955875191810208,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,1.07021290561242,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0,0,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,11.5081309126794,5.72895513439397,6.8741272937475,7.53590771747707,6.0431511791176,8.77529250301348,4.5032120322422,7.25027854374727,7.7664046762773,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.367687016900028,1.33348036680969,0.618105171716683,0,1.01078884705519,0.760437899670719,0.754505365544305,0.561849044819294,0.448176066834085,0.287177344778066,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.715308569841963,0.872078499793971,0.564656282491984,0.676916863133412,0.548783918618318,0.526139422875686,0.407412341537585,1.12228454331548,0.711810108745045,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.749431733813838,0.701794825336225,0.644613162144895,0.382576664137687,0,0.463735671240843 | |||
|short_description=p5@Nell2 | |||
}} |
Latest revision as of 11:08, 1 October 2015
Short description: | p5@Nell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -177bp_to_ENSMUST00000075275, uc007xjq.1_5end |
EntrezGene: | Nell2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.16e-31 | 23 |
neuroblast (sensu Vertebrata) | 3.16e-31 | 23 |
neuron | 7.39e-29 | 33 |
neuronal stem cell | 7.39e-29 | 33 |
neuroblast | 7.39e-29 | 33 |
electrically signaling cell | 7.39e-29 | 33 |
electrically responsive cell | 2.06e-23 | 39 |
electrically active cell | 2.06e-23 | 39 |
neural cell | 1.24e-20 | 43 |
ectodermal cell | 5.12e-20 | 44 |
neurectodermal cell | 5.12e-20 | 44 |
neuron of cerebral cortex | 8.75e-12 | 6 |
embryonic cell | 2.92e-10 | 70 |
hippocampal neuron | 8.78e-07 | 3 |