FFCP PHASE1:Mm9::chr15:78504110..78504119,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78504110..78504119,-|id=chr15:78504110..78504119,-|ontology_enrichment_celltype=CL:0000117!1.09e-21!23;CL:0000337!1.09e-21!23;CL:0000540!2.86e-13!33;CL:0000047!2.86e-13!33;CL:0000031!2.86e-13!33;CL:0000404!2.86e-13!33;CL:0000393!1.61e-11!39;CL:0000211!1.61e-11!39;CL:0002319!5.68e-10!43;CL:0000221!1.30e-09!44;CL:0000133!1.30e-09!44;CL:0000055!1.13e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-17,23;CL:0000337,5.58e-17,23;CL:0000540,3.02e-11,33;CL:0000047,3.02e-11,33;CL:0000031,3.02e-11,33;CL:0000404,3.02e-11,33;CL:0002610,4.53e-11,3;CL:0000393,3.22e-09,39;CL:0000211,3.22e-09,39;CL:0002611,1.27e-08,2;CL:0002319,3.50e-08,43;CL:0000221,5.94e-08,44;CL:0000133,5.94e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.13e-32!34;UBERON:0001017!4.86e-29!73;UBERON:0005743!4.86e-29!73;UBERON:0001049!3.80e-28!52;UBERON:0005068!3.80e-28!52;UBERON:0006241!3.80e-28!52;UBERON:0007135!3.80e-28!52;UBERON:0000073!6.36e-28!75;UBERON:0001016!6.36e-28!75;UBERON:0000955!1.80e-25!50;UBERON:0006238!1.80e-25!50;UBERON:0002791!3.88e-25!29;UBERON:0003528!3.88e-25!29;UBERON:0001893!3.88e-25!29;UBERON:0002616!2.57e-24!49;UBERON:0003080!1.95e-21!40;UBERON:0002780!2.42e-20!39;UBERON:0001890!2.42e-20!39;UBERON:0006240!2.42e-20!39;UBERON:0000956!2.52e-20!21;UBERON:0001869!2.52e-20!21;UBERON:0000203!2.52e-20!21;UBERON:0000033!2.01e-19!63;UBERON:0004121!3.36e-19!102;UBERON:0000924!3.36e-19!102;UBERON:0006601!3.36e-19!102;UBERON:0002346!5.75e-19!71;UBERON:0003075!5.75e-19!71;UBERON:0007284!5.75e-19!71;UBERON:0003056!2.55e-17!49;UBERON:0007811!5.19e-16!86;UBERON:0002021!8.78e-16!10;UBERON:0000411!8.78e-16!10;UBERON:0001950!8.78e-16!10;UBERON:0002619!9.85e-16!17;UBERON:0000153!1.04e-13!94;UBERON:0002240!1.38e-09!6;UBERON:0005174!1.38e-09!6;UBERON:0001137!1.38e-09!6;UBERON:0000025!1.35e-08!114;UBERON:0001948!2.85e-08!5;UBERON:0002315!2.85e-08!5;UBERON:0004111!4.73e-08!122;UBERON:0000064!6.87e-08!99;UBERON:0003076!3.70e-07!12;UBERON:0003057!3.70e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.46e-35,10;UBERON:0000411,1.46e-35,10;UBERON:0001950,1.46e-35,10;UBERON:0002020,1.59e-35,34;UBERON:0000073,6.92e-32,54;UBERON:0001049,2.45e-27,52;UBERON:0005068,2.45e-27,52;UBERON:0006241,2.45e-27,52;UBERON:0007135,2.45e-27,52;UBERON:0001017,3.64e-27,73;UBERON:0001016,2.45e-26,75;UBERON:0003528,3.34e-25,29;UBERON:0002791,3.34e-25,29;UBERON:0001893,3.34e-25,29;UBERON:0002619,1.89e-24,17;UBERON:0000956,6.07e-23,21;UBERON:0001869,6.07e-23,21;UBERON:0000203,6.07e-23,21;UBERON:0002346,1.63e-21,64;UBERON:0003075,1.63e-21,64;UBERON:0007284,1.63e-21,64;UBERON:0002780,1.15e-20,39;UBERON:0001890,1.15e-20,39;UBERON:0006240,1.15e-20,39;UBERON:0003080,4.50e-20,40;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0010371,2.13e-18,73;UBERON:0002616,4.64e-17,46;UBERON:0000955,1.24e-16,47;UBERON:0006238,1.24e-16,47;UBERON:0003056,7.90e-16,49;UBERON:0002240,9.65e-16,6;UBERON:0005174,9.65e-16,6;UBERON:0001137,9.65e-16,6;UBERON:0010314,8.24e-14,92;UBERON:0001948,1.14e-12,5;UBERON:0002315,1.14e-12,5;UBERON:0004684,4.53e-11,3;UBERON:0002275,4.53e-11,3;UBERON:0000025,2.13e-10,114;UBERON:0004111,1.85e-09,122;UBERON:0002256,1.27e-08,2;UBERON:0003076,9.81e-08,12;UBERON:0003057,9.81e-08,12;UBERON:0011216,1.17e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.675029691658453,0.841299845405528,2.28520787523043,2.20868540951614,0.244981598429908,0.575072826109418,0,1.10115880999389,2.042997409363,1.99688493233117,0.395658863190582,2.01272815925301,0,1.67509799400829,0,1.5279824777681,2.94628585473668,2.27794689278565,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0.628271760564322,1.04294592115366,0.767146371990992,1.87009240103604,0.811206315338788,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,1.89260953707715,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0.501572104035363,1.6942555278512,1.84130094602871,1.71868654031819,2.749650917499,2.05524755931193,2.2661816921691,3.37511250115903,2.2516060161211,2.71885445390523,2.07104124700728,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.467863216890817,0,0.191288332068843,0,0|short_description=p@chr15:78504110..78504119,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:78504110..78504119,- | |||
|description=CAGE_peak_at_chr15:78504110..78504119,- | |||
|id=chr15:78504110..78504119,- | |||
|ontology_enrichment_celltype=CL:0000117!1.09e-21!23;CL:0000337!1.09e-21!23;CL:0000540!2.86e-13!33;CL:0000047!2.86e-13!33;CL:0000031!2.86e-13!33;CL:0000404!2.86e-13!33;CL:0000393!1.61e-11!39;CL:0000211!1.61e-11!39;CL:0002319!5.68e-10!43;CL:0000221!1.30e-09!44;CL:0000133!1.30e-09!44;CL:0000055!1.13e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-17,23;CL:0000337,5.58e-17,23;CL:0000540,3.02e-11,33;CL:0000047,3.02e-11,33;CL:0000031,3.02e-11,33;CL:0000404,3.02e-11,33;CL:0002610,4.53e-11,3;CL:0000393,3.22e-09,39;CL:0000211,3.22e-09,39;CL:0002611,1.27e-08,2;CL:0002319,3.50e-08,43;CL:0000221,5.94e-08,44;CL:0000133,5.94e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.13e-32!34;UBERON:0001017!4.86e-29!73;UBERON:0005743!4.86e-29!73;UBERON:0001049!3.80e-28!52;UBERON:0005068!3.80e-28!52;UBERON:0006241!3.80e-28!52;UBERON:0007135!3.80e-28!52;UBERON:0000073!6.36e-28!75;UBERON:0001016!6.36e-28!75;UBERON:0000955!1.80e-25!50;UBERON:0006238!1.80e-25!50;UBERON:0002791!3.88e-25!29;UBERON:0003528!3.88e-25!29;UBERON:0001893!3.88e-25!29;UBERON:0002616!2.57e-24!49;UBERON:0003080!1.95e-21!40;UBERON:0002780!2.42e-20!39;UBERON:0001890!2.42e-20!39;UBERON:0006240!2.42e-20!39;UBERON:0000956!2.52e-20!21;UBERON:0001869!2.52e-20!21;UBERON:0000203!2.52e-20!21;UBERON:0000033!2.01e-19!63;UBERON:0004121!3.36e-19!102;UBERON:0000924!3.36e-19!102;UBERON:0006601!3.36e-19!102;UBERON:0002346!5.75e-19!71;UBERON:0003075!5.75e-19!71;UBERON:0007284!5.75e-19!71;UBERON:0003056!2.55e-17!49;UBERON:0007811!5.19e-16!86;UBERON:0002021!8.78e-16!10;UBERON:0000411!8.78e-16!10;UBERON:0001950!8.78e-16!10;UBERON:0002619!9.85e-16!17;UBERON:0000153!1.04e-13!94;UBERON:0002240!1.38e-09!6;UBERON:0005174!1.38e-09!6;UBERON:0001137!1.38e-09!6;UBERON:0000025!1.35e-08!114;UBERON:0001948!2.85e-08!5;UBERON:0002315!2.85e-08!5;UBERON:0004111!4.73e-08!122;UBERON:0000064!6.87e-08!99;UBERON:0003076!3.70e-07!12;UBERON:0003057!3.70e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.46e-35,10;UBERON:0000411,1.46e-35,10;UBERON:0001950,1.46e-35,10;UBERON:0002020,1.59e-35,34;UBERON:0000073,6.92e-32,54;UBERON:0001049,2.45e-27,52;UBERON:0005068,2.45e-27,52;UBERON:0006241,2.45e-27,52;UBERON:0007135,2.45e-27,52;UBERON:0001017,3.64e-27,73;UBERON:0001016,2.45e-26,75;UBERON:0003528,3.34e-25,29;UBERON:0002791,3.34e-25,29;UBERON:0001893,3.34e-25,29;UBERON:0002619,1.89e-24,17;UBERON:0000956,6.07e-23,21;UBERON:0001869,6.07e-23,21;UBERON:0000203,6.07e-23,21;UBERON:0002346,1.63e-21,64;UBERON:0003075,1.63e-21,64;UBERON:0007284,1.63e-21,64;UBERON:0002780,1.15e-20,39;UBERON:0001890,1.15e-20,39;UBERON:0006240,1.15e-20,39;UBERON:0003080,4.50e-20,40;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0010371,2.13e-18,73;UBERON:0002616,4.64e-17,46;UBERON:0000955,1.24e-16,47;UBERON:0006238,1.24e-16,47;UBERON:0003056,7.90e-16,49;UBERON:0002240,9.65e-16,6;UBERON:0005174,9.65e-16,6;UBERON:0001137,9.65e-16,6;UBERON:0010314,8.24e-14,92;UBERON:0001948,1.14e-12,5;UBERON:0002315,1.14e-12,5;UBERON:0004684,4.53e-11,3;UBERON:0002275,4.53e-11,3;UBERON:0000025,2.13e-10,114;UBERON:0004111,1.85e-09,122;UBERON:0002256,1.27e-08,2;UBERON:0003076,9.81e-08,12;UBERON:0003057,9.81e-08,12;UBERON:0011216,1.17e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.675029691658453,0.841299845405528,2.28520787523043,2.20868540951614,0.244981598429908,0.575072826109418,0,1.10115880999389,2.042997409363,1.99688493233117,0.395658863190582,2.01272815925301,0,1.67509799400829,0,1.5279824777681,2.94628585473668,2.27794689278565,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0.628271760564322,1.04294592115366,0.767146371990992,1.87009240103604,0.811206315338788,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,1.89260953707715,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0.501572104035363,1.6942555278512,1.84130094602871,1.71868654031819,2.749650917499,2.05524755931193,2.2661816921691,3.37511250115903,2.2516060161211,2.71885445390523,2.07104124700728,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p@chr15:78504110..78504119,- | |||
}} |
Latest revision as of 14:41, 5 August 2015
Short description: | p@chr15:78504110..78504119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78504110..78504119, - |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.58e-17 | 23 |
neuroblast (sensu Vertebrata) | 5.58e-17 | 23 |
neuron | 3.02e-11 | 33 |
neuronal stem cell | 3.02e-11 | 33 |
neuroblast | 3.02e-11 | 33 |
electrically signaling cell | 3.02e-11 | 33 |
raphe nuclei neuron | 4.53e-11 | 3 |
electrically responsive cell | 3.22e-09 | 39 |
electrically active cell | 3.22e-09 | 39 |
neuron of the dorsal spinal cord | 1.27e-08 | 2 |
neural cell | 3.50e-08 | 43 |
ectodermal cell | 5.94e-08 | 44 |
neurectodermal cell | 5.94e-08 | 44 |