FFCP PHASE1:Hg19::chr4:54457747..54457758,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84708 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6657 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TBB1 | |||
|association_with_transcript=-23bp_to_NM_001126328,uc003hag.3_5end | |||
|cluster_id=chr4:54457747..54457758,- | |||
|description=CAGE_peak_8_at_LNX1_5end | |||
|id=chr4:54457747..54457758,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.80e-08;2!CL:0001016;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.74e-08,2;CL:0001016,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.72e-14;1!UBERON:0003124;1.72e-14;1!UBERON:0007123;1.18e-11;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.21e-15;1!DOID:1357;6.21e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.17e-15,1;DOID:1357,8.17e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.64e-10!169;UBERON:0000925!9.64e-10!169;UBERON:0006595!9.64e-10!169;UBERON:0001007!1.05e-09!155;UBERON:0001555!1.05e-09!155;UBERON:0007026!1.05e-09!155;UBERON:0004921!1.63e-09!129;UBERON:0004185!1.63e-09!129;UBERON:0007023!1.66e-07!115;UBERON:0001041!3.85e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.21e-15;1!UBERON:0001825;6.21e-15;1!UBERON:0001831;1.72e-14;1!UBERON:0001567;1.72e-14;1!UBERON:0002046;1.18e-11;5!UBERON:0002368;1.03e-09;33!UBERON:0000007;4.09e-08;2!UBERON:0006562;6.80e-08;2!UBERON:0001829;6.80e-08;2!UBERON:0004089;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.17e-15,1;UBERON:0001825,8.17e-15,1;UBERON:0001831,9.36e-15,1;UBERON:0001567,9.36e-15,1;UBERON:0008801,9.36e-15,1;UBERON:0002046,1.03e-11,5;UBERON:0004117,1.03e-11,5;UBERON:0007689,1.03e-11,5;UBERON:0007123,1.03e-11,5;UBERON:0003091,1.03e-11,5;UBERON:0000949,1.70e-10,45;UBERON:0002368,1.24e-09,35;UBERON:0000007,4.38e-08,2;UBERON:0001829,5.02e-08,2;UBERON:0004089,5.02e-08,2;UBERON:0002530,6.28e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,1.25481369850743,0.230850775511391,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,1.5476039091159,0,0,0.945668487590378,1.52118305591495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0.638341257770182,0,0,0,0,2.19875734750328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0,0,0,0,0,1.64477330057155,0,0,1.14986184875636,0,0,0.606965604236632,2.27662191351298,1.33053555243958,0,0,0,0,0,0.111231401892069,0.470958557103084,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0.860454717640555,0,0,0.423387050190929,0.68732060563215,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0.45178432815584,0,0.452888530700021,0.231522474323834,0.218559560503957,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.481448200135009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0.459474497674225,0.250707539292375,0,0,0,0,0.852935927603924,0.714193294391221,0,0.248298857183432,0,1.52753179867596,2.42540626749863,0.870866991587845,0,0.26940821205835,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p8@LNX1 | |||
}} |
Latest revision as of 00:29, 18 September 2015
Short description: | p8@LNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_NM_001126328, uc003hag.3_5end |
EntrezGene: | LNX1 |
HGNC: | 6657 |
UniProt: | Q8TBB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.74e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.17e-15 | 1 |
paranasal sinus | 8.17e-15 | 1 |
parotid gland | 9.36e-15 | 1 |
cheek | 9.36e-15 | 1 |
parotid gland primordium | 9.36e-15 | 1 |
thyroid gland | 1.03e-11 | 5 |
pharyngeal pouch | 1.03e-11 | 5 |
thyroid diverticulum | 1.03e-11 | 5 |
pharyngeal pouch 2 | 1.03e-11 | 5 |
thyroid primordium | 1.03e-11 | 5 |
endocrine system | 1.70e-10 | 45 |
endocrine gland | 1.24e-09 | 35 |
pituitary gland | 4.38e-08 | 2 |
major salivary gland | 5.02e-08 | 2 |
midface | 5.02e-08 | 2 |
gland | 6.28e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.17e-15 | 1 |
maxillary sinus cancer | 8.17e-15 | 1 |