FFCP PHASE1:Hg19::chr4:41218709..41218745,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=582 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000502682_5end | |||
|cluster_id=chr4:41218709..41218745,- | |||
|description=CAGE_peak_8_at_APBB2_5end | |||
|id=chr4:41218709..41218745,- | |||
|ontology_enrichment_celltype=CL:0002139!7.39e-13!24;CL:0000115!2.67e-11!35;CL:0002078!1.48e-10!44;CL:0000071!5.80e-09!18;CL:0002546!5.80e-09!18;CL:0000213!6.18e-07!57;CL:0000215!6.18e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.23e-22;24!CL:0000115;1.37e-16;36!CL:0000071;8.90e-15;18!CL:0002078;1.32e-10;45!CL:0002138;7.07e-10;6!CL:0002543;4.98e-09;6!CL:0000213;1.11e-07;58!CL:0000215;1.11e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.11e-22,24;CL:0000115,1.61e-20,36;CL:0002078,6.33e-16,45;CL:0000071,7.28e-15,18;CL:0002546,7.28e-15,18;CL:0000213,1.89e-11,58;CL:0000215,1.89e-11,58;CL:0005020,8.14e-10,6;CL:0002138,8.14e-10,6;CL:0005022,8.14e-10,6;CL:0002543,4.15e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;8.90e-15;18!CL:0005022;7.07e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.10e-10!659;UBERON:0000477!3.94e-09!286;UBERON:0001986!5.80e-09!18;UBERON:0004638!5.80e-09!18;UBERON:0004852!5.80e-09!18;UBERON:0000467!8.57e-09!625;UBERON:0000480!1.33e-08!626;UBERON:0002049!2.07e-08!79;UBERON:0007798!2.07e-08!79;UBERON:0004111!6.66e-08!241;UBERON:0000487!1.28e-07!22;UBERON:0006914!1.67e-07!25;UBERON:0000055!4.43e-07!69;UBERON:0001009!6.44e-07!113;UBERON:0002050!7.30e-07!605;UBERON:0005423!7.30e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.90e-15;18!UBERON:0001986;8.90e-15;18!UBERON:0004852;8.90e-15;18!UBERON:0000487;8.22e-13;22!UBERON:0006914;1.09e-10;25!UBERON:0002405;8.20e-08;27!UBERON:0000490;2.16e-07;33!UBERON:0001638;2.58e-07;9!UBERON:0003920;2.58e-07;9!UBERON:0004582;2.58e-07;9!UBERON:0001473;4.49e-07;8!UBERON:0004536;4.49e-07;8!UBERON:0006558;4.49e-07;8!UBERON:0002465;5.72e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.28e-15,18;UBERON:0001986,7.28e-15,18;UBERON:0004852,7.28e-15,18;UBERON:0000487,1.10e-12,22;UBERON:0006914,1.39e-10,25;UBERON:0000055,1.78e-10,68;UBERON:0002049,9.01e-09,78;UBERON:0007798,9.01e-09,78;UBERON:0001009,1.90e-08,112;UBERON:0004535,1.15e-07,109;UBERON:0001638,1.56e-07,9;UBERON:0003920,1.56e-07,9;UBERON:0004582,1.56e-07,9;UBERON:0007500,4.71e-07,59;UBERON:0001981,4.71e-07,59;UBERON:0004537,4.71e-07,59;UBERON:0006965,4.71e-07,59;UBERON:0001473,4.95e-07,8;UBERON:0004536,4.95e-07,8;UBERON:0006558,4.95e-07,8;UBERON:0002465,5.35e-07,10 | |||
|phase1_expression=0.726713517082227,0.428201047781966,1.55049844505568,1.0007329835313,1.34088328328186,1.74467704820074,0,1.26343974685366,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.495065411840187,0,0,0,0,0.975865597581014,0.246242116153576,0,0.626909442956176,0.286235987131057,0.136874425072884,0.376627918784408,0.534893840235659,1.14940825229924,0.393553906568396,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,1.7412554317715,1.70215567407342,0.622822248995575,0,0,0,0,1.10483290796269,1.58231193720442,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,1.0843174571537,1.00267582127178,0.289693037921647,0.795285947051099,0,0.945348171640679,0.443458794925128,0.614843499851882,0.916853528483988,0,0,0,0.348259474598534,0.132957960518865,0,0,0,2.58391129576717,0,0.694281003215189,1.13061588384802,2.93649605346934,1.37559020970034,1.25396979922086,6.71883573840255,4.26919515224052,5.69025041699939,2.41697590265488,1.52054421143703,3.41686880567437,0.735326160691737,2.43042584364528,3.66128885964727,5.16417557040191,2.13961812918312,1.53316637465883,2.84779697870439,2.01521918323448,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.529636723252875,0,0.354668382198357,1.68203280042692,1.06748995729705,0.24666754841716,0.622422070799533,1.48181739276657,0.490385709340376,0.454072282934794,0,0.468642863667593,0,0,0.149448680551801,0.704606991862589,1.45685649931318,0.561803226808994,1.02077085627447,0.491337269247072,0.929932030581889,0,1.97813543422845,0,0,1.5150250255866,0.375355559615893,0.831192346452549,0,0.919463387397059,1.80285670687916,0,0.717558542755448,0.213557388818567,0.423863802319124,1.20036438433761,0.515262646192195,1.54584324027377,0.37223371266318,0.168776332241266,0.487185025805993,2.52433774244115,0.736399189138395,0.646584227275248,0.710019185033229,0.604512589365842,0,0.773043412653187,0.272746120590835,0,0,0,0,0.414644220061482,0,0,0,1.28648187638577,1.38134921352481,1.39310378409594,0.721879481669586,0.236613600079688,0.337169380156203,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,3.69077727312324,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0.439001141634502,0,0,0.462942225792648,0.977424915930974,0,0,0.579652024875384,2.7003999674239,2.02113026865503,3.70388410061289,2.47330397904978,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0.16798212819886,0.283550194484773,0.716468181622786,0.581267877027924,0,0,0,0,1.00883967391873,0.25248486685276,0.063497894292169,0.381988425558278,1.17217447210047,1.71072446022705,0.308482478109971,0.300343057843917,1.14330573052231,0.784917590417525,0.43596006883328,0.36669142910475,1.16344544182,0,0.845302752556,1.32969058292435,1.04007436911366,0.257207374262142,0,0.266422179016099,0.714889968290738,0.542621605391443,0.823240336780769,0.977208552881205,0,0.791951872933429,1.20575750823834,0,0.299918973546171,0,0,0,1.19812427745791,0,0,0.144781306667579,0.410952645100767,0.895304816199478,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,0.271265023699736,0.623912584592421,1.07057393278297,0.788512075169673,0.117141414992713,0.601892199455438,0,2.0694614258501,0,0.368738337083406,0.60818530127658,0.391602314925481,0,0,0,0,0,0,0.604780586659361,0.744323423456331,1.53461973288062,0,0.768834895534206,2.55853624533352,0.321707842287215,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.116210378459959,0.120859449591622,0.40101294060657,0.276242966807689,0.114814448164607,0.182091168006717,0.393373244878272,0,0.693138033939733,0,0,1.16106791782163,1.13733384070897,0.510281115829547,1.51141141271498,1.54227252690289,0,0,0,0.831076008928724,0.671624264166535,0,0,0.256450125116389,0.328014645699706,0.325378394664303,1.13345112812495,0,0.165018999841176,0.574265537996172,1.30012049207304,0,0,0.770243085573222,1.07452572308291,1.51620229732984,0.429680979473094,0.290033387828457,0.255679882248303,0,0.495854746082934,0,1.27612712494584,0.809262246844399,0.464845549297286,0.31481234683064,0,0,1.06461206063404,0,0.55597265731176,0.715624433709956,1.48863347743867,0.949138274156178,0.953150969619124,0,0,0.636406495851874,0.78494864019923,0.179872457583315,0.823611089208164,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,1.13008116620243,0,0.66343897524122,0.438450885253763,1.15755106853338,0,0.608731130888112,0.30982349809975,0,0.573645408816206,0.589494246078727,0.35667105148125,0.354761064070598,0.211107635297664,0.658589785919804,0.75894634753143,0.349934720244983,0.0962221127255121,0,0,1.129725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| |||
|short_description=p8@APBB2 | |||
}} |
Latest revision as of 19:17, 17 September 2015
Short description: | p8@APBB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_APBB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502682_5end |
EntrezGene: | APBB2 |
HGNC: | 582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.11e-22 | 24 |
endothelial cell | 1.61e-20 | 36 |
meso-epithelial cell | 6.33e-16 | 45 |
blood vessel endothelial cell | 7.28e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.28e-15 | 18 |
lining cell | 1.89e-11 | 58 |
barrier cell | 1.89e-11 | 58 |
lymphangioblast | 8.14e-10 | 6 |
endothelial cell of lymphatic vessel | 8.14e-10 | 6 |
vascular lymphangioblast | 8.14e-10 | 6 |
vein endothelial cell | 4.15e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.28e-15 | 18 |
endothelium | 7.28e-15 | 18 |
cardiovascular system endothelium | 7.28e-15 | 18 |
simple squamous epithelium | 1.10e-12 | 22 |
squamous epithelium | 1.39e-10 | 25 |
vessel | 1.78e-10 | 68 |
vasculature | 9.01e-09 | 78 |
vascular system | 9.01e-09 | 78 |
circulatory system | 1.90e-08 | 112 |
cardiovascular system | 1.15e-07 | 109 |
vein | 1.56e-07 | 9 |
venous blood vessel | 1.56e-07 | 9 |
venous system | 1.56e-07 | 9 |
epithelial tube open at both ends | 4.71e-07 | 59 |
blood vessel | 4.71e-07 | 59 |
blood vasculature | 4.71e-07 | 59 |
vascular cord | 4.71e-07 | 59 |
lymphatic vessel | 4.95e-07 | 8 |
lymph vasculature | 4.95e-07 | 8 |
lymphatic part of lymphoid system | 4.95e-07 | 8 |
lymphoid system | 5.35e-07 | 10 |