FFCP PHASE1:Mm9::chr15:41701249..41701273,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=223513|HGNC=|MCL_coexpression_id=14|UniProt=Q8BUZ1|association_with_transcript=0bp_to_ENSMUST00000054742,NM_175456,uc007vpb.1_5end|description=CAGE_peak_1_at_Abra_5end|id=chr15:41701249..41701273,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.42e-09!18;UBERON:0000948!2.42e-09!18;UBERON:0005498!2.42e-09!18;UBERON:0004140!2.42e-09!18;UBERON:0009881!2.42e-09!18;UBERON:0004141!2.42e-09!18;UBERON:0003084!2.42e-09!18;UBERON:0007005!2.42e-09!18;UBERON:0004139!2.42e-09!18;UBERON:0004291!2.42e-09!18;UBERON:0003102!8.80e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.37e-12,18;UBERON:0000948,1.37e-12,18;UBERON:0005498,1.37e-12,18;UBERON:0004140,1.37e-12,18;UBERON:0009881,1.37e-12,18;UBERON:0004141,1.37e-12,18;UBERON:0003084,1.37e-12,18;UBERON:0007005,1.37e-12,18;UBERON:0004139,1.37e-12,18;UBERON:0004291,1.37e-12,18;UBERON:0004535,1.04e-09,23;UBERON:0001009,1.04e-09,23;UBERON:0003102,1.73e-09,22;UBERON:0005418,5.20e-07,5;UBERON:0002472,5.20e-07,5;UBERON:0008784,5.20e-07,5;UBERON:0006058,5.20e-07,5;UBERON:0004709,5.20e-07,5;UBERON:0002529,5.20e-07,5;UBERON:0010538,5.20e-07,5;UBERON:0005420,5.20e-07,5;UBERON:0010758,5.20e-07,5;UBERON:0000978,5.20e-07,5;UBERON:0002103,5.20e-07,5;UBERON:0000376,5.20e-07,5;UBERON:0000154,5.20e-07,5;UBERON:0010709,5.20e-07,5;UBERON:0005730,5.20e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.427115042397309,0,0,0,0,0,0,0,0,0,55.6159903721737,0,0,0,0,0,0,0,0,0,0,12.1034912502204,0,0,0,0.608930956624282,0.230615497256059,0.150722640552623,3.17489509266403,0.502666365318702,1.73036477414062,2.16899035379867,45.1151381494436,49.9859566337494,99.8203663440979,59.1547808824971,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0.255715457330331,0.20778804455956,0,0.203678727700633,20.029522268225,0,10.9429765060966,0,0.689706313300419,0.900310649026746,1.50704817835715,2.9255694635071,3.97152532883034,3.74806898238915,10.8655415710387,0,0,1.05570674498369,2.41115305670332,1.11218899690239,1.74126083261083,1.4404749548556,0,0,0,0,10.7705401718461,7.50483391939508,8.4629168886677,7.10234206755631,9.24791889212798,8.33042409591843,9.53389173476672,10.7309360559848,18.3321587516456,8.88623189532794,9.68588038066662,11.5117709555115,14.9123987173839,12.0752563410078,25.2308067269499,0.210289948564127,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.210407459670956,0.189709611372772,0.295220295959204,0.627994911365499,0.246794327843601,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,0,6.27890947326693,0,1.10851914099963,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.714130922658041,1.17080188714679,0.788175720530955,0.664394068946325,1.2756381492599,2.45794972073607,4.31712454664739,3.03763023021174,0,0,0,1.10374698521893,0.160550589987792,0,0,214.095346269308,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,1.14020871547503,0,0,0,0.302323556964751,0,0.590603785761546,0,0,0.363533729477506,5.70395805415554,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,1.54369878638473,19.2916915941532,10.8181165886257,4.88534691918062,3.58117032009409,1.14898629821543,0.582961673259701,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,0.406638934253697,0,0,0.218362563746178,0.404593039154462,0.0826534557253359,4.97336289769656,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,16.1296803504405,0,0,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.886137163047463,0.201932899896295,0.15241361331,0,0.292373642219257,0,0,91.145614213315,0,0,0,0.19318959403219,0,0,1.07184189539533,0,0,0,1.14579102687879,0.171853182343688,0.685082519770642,2.2661816921691,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0,1.02440163452481,2.18796045361465,1.25767897576789,3.49302666055027,7.3341420174533,7.2112270033613,5.45562656306086,5.30664144703975,9.37873409593887,7.1678009726709,5.80577346313271,5.8262888688431,4.99688579913835,4.76293691283074,7.18482820858104,5.01563973205633,6.59337441285291,6.62395140604788,6.17164654293748,6.03417740941747,5.7224685587357,5.81385666529314,8.28162547654909,7.10762706290083,6.95126296916536,5.5244639401947,6.65440157844723,7.85599180320834,6.64356101495375,6.69830480153832,6.13846564754534,5.73266312388074,4.62975866354739,3.74715866906919,7.71974307869848,20.19787908054,42.4660097192832,49.8536607210105,36.6351180280266|short_description=p1@Abra}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=223513 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BUZ1 | |||
|association_with_transcript=0bp_to_ENSMUST00000054742,NM_175456,uc007vpb.1_5end | |||
|cluster_id=chr15:41701249..41701273,- | |||
|description=CAGE_peak_1_at_Abra_5end | |||
|id=chr15:41701249..41701273,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.42e-09!18;UBERON:0000948!2.42e-09!18;UBERON:0005498!2.42e-09!18;UBERON:0004140!2.42e-09!18;UBERON:0009881!2.42e-09!18;UBERON:0004141!2.42e-09!18;UBERON:0003084!2.42e-09!18;UBERON:0007005!2.42e-09!18;UBERON:0004139!2.42e-09!18;UBERON:0004291!2.42e-09!18;UBERON:0003102!8.80e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.37e-12,18;UBERON:0000948,1.37e-12,18;UBERON:0005498,1.37e-12,18;UBERON:0004140,1.37e-12,18;UBERON:0009881,1.37e-12,18;UBERON:0004141,1.37e-12,18;UBERON:0003084,1.37e-12,18;UBERON:0007005,1.37e-12,18;UBERON:0004139,1.37e-12,18;UBERON:0004291,1.37e-12,18;UBERON:0004535,1.04e-09,23;UBERON:0001009,1.04e-09,23;UBERON:0003102,1.73e-09,22;UBERON:0005418,5.20e-07,5;UBERON:0002472,5.20e-07,5;UBERON:0008784,5.20e-07,5;UBERON:0006058,5.20e-07,5;UBERON:0004709,5.20e-07,5;UBERON:0002529,5.20e-07,5;UBERON:0010538,5.20e-07,5;UBERON:0005420,5.20e-07,5;UBERON:0010758,5.20e-07,5;UBERON:0000978,5.20e-07,5;UBERON:0002103,5.20e-07,5;UBERON:0000376,5.20e-07,5;UBERON:0000154,5.20e-07,5;UBERON:0010709,5.20e-07,5;UBERON:0005730,5.20e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.427115042397309,0,0,0,0,0,0,0,0,0,55.6159903721737,0,0,0,0,0,0,0,0,0,0,12.1034912502204,0,0,0,0.608930956624282,0.230615497256059,0.150722640552623,3.17489509266403,0.502666365318702,1.73036477414062,2.16899035379867,45.1151381494436,49.9859566337494,99.8203663440979,59.1547808824971,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0.255715457330331,0.20778804455956,0,0.203678727700633,20.029522268225,0,10.9429765060966,0,0.689706313300419,0.900310649026746,1.50704817835715,2.9255694635071,3.97152532883034,3.74806898238915,10.8655415710387,0,0,1.05570674498369,2.41115305670332,1.11218899690239,1.74126083261083,1.4404749548556,0,0,0,0,10.7705401718461,7.50483391939508,8.4629168886677,7.10234206755631,9.24791889212798,8.33042409591843,9.53389173476672,10.7309360559848,18.3321587516456,8.88623189532794,9.68588038066662,11.5117709555115,14.9123987173839,12.0752563410078,25.2308067269499,0.210289948564127,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0.210407459670956,0.189709611372772,0.295220295959204,0.627994911365499,0.246794327843601,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,1.24815069245824,0,6.27890947326693,0,1.10851914099963,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.714130922658041,1.17080188714679,0.788175720530955,0.664394068946325,1.2756381492599,2.45794972073607,4.31712454664739,3.03763023021174,0,0,0,1.10374698521893,0.160550589987792,0,0,214.095346269308,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,1.14020871547503,0,0,0,0.302323556964751,0,0.590603785761546,0,0,0.363533729477506,5.70395805415554,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,1.54369878638473,19.2916915941532,10.8181165886257,4.88534691918062,3.58117032009409,1.14898629821543,0.582961673259701,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0,0.406638934253697,0,0,0.218362563746178,0.404593039154462,0.0826534557253359,4.97336289769656,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,16.1296803504405,0,0,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.886137163047463,0.201932899896295,0.15241361331,0,0.292373642219257,0,0,91.145614213315,0,0,0,0.19318959403219,0,0,1.07184189539533,0,0,0,1.14579102687879,0.171853182343688,0.685082519770642,2.2661816921691,0,1.35096360967266,0.453142408984205,1.03552062350364,0.207574695168353,0,1.02440163452481,2.18796045361465,1.25767897576789,3.49302666055027,7.3341420174533,7.2112270033613,5.45562656306086,5.30664144703975,9.37873409593887,7.1678009726709,5.80577346313271,5.8262888688431,4.99688579913835,4.76293691283074,7.18482820858104,5.01563973205633,6.59337441285291,6.62395140604788,6.17164654293748,6.03417740941747,5.7224685587357,5.81385666529314,8.28162547654909,7.10762706290083,6.95126296916536,5.5244639401947,6.65440157844723,7.85599180320834,6.64356101495375,6.69830480153832,6.13846564754534,5.73266312388074,4.62975866354739,3.74715866906919,7.71974307869848,20.19787908054,42.4660097192832,49.8536607210105,36.6351180280266 | |||
|short_description=p1@Abra | |||
}} |
Latest revision as of 19:08, 26 September 2015
Short description: | p1@Abra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Abra_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | 0bp_to_ENSMUST00000054742, NM_175456, uc007vpb.1_5end |
EntrezGene: | Abra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.37e-12 | 18 |
heart | 1.37e-12 | 18 |
primitive heart tube | 1.37e-12 | 18 |
primary heart field | 1.37e-12 | 18 |
anterior lateral plate mesoderm | 1.37e-12 | 18 |
heart tube | 1.37e-12 | 18 |
heart primordium | 1.37e-12 | 18 |
cardiac mesoderm | 1.37e-12 | 18 |
cardiogenic plate | 1.37e-12 | 18 |
heart rudiment | 1.37e-12 | 18 |
cardiovascular system | 1.04e-09 | 23 |
circulatory system | 1.04e-09 | 23 |
surface structure | 1.73e-09 | 22 |
hindlimb bud | 5.20e-07 | 5 |
stylopod | 5.20e-07 | 5 |
lower limb segment | 5.20e-07 | 5 |
multi-limb segment region | 5.20e-07 | 5 |
pelvic appendage | 5.20e-07 | 5 |
limb segment | 5.20e-07 | 5 |
paired limb/fin segment | 5.20e-07 | 5 |
pelvic appendage bud | 5.20e-07 | 5 |
subdivision of organism along appendicular axis | 5.20e-07 | 5 |
leg | 5.20e-07 | 5 |
hindlimb | 5.20e-07 | 5 |
hindlimb stylopod | 5.20e-07 | 5 |
posterior region of body | 5.20e-07 | 5 |
pelvic complex | 5.20e-07 | 5 |
hindlimb/pelvic fin field | 5.20e-07 | 5 |