FFCP PHASE1:Mm9::chr15:39029653..39029669,+: Difference between revisions
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{{FFCP|EntrezGene=116838|HGNC=|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81|association_with_transcript=-208bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end|description=CAGE_peak_5_at_Rims2_5end|id=chr15:39029653..39029669,+|ontology_enrichment_celltype=CL:0000540!7.38e-12!33;CL:0000047!7.38e-12!33;CL:0000031!7.38e-12!33;CL:0000404!7.38e-12!33;CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000393!6.80e-08!39;CL:0000211!6.80e-08!39;CL:0000221!1.29e-07!44;CL:0000133!1.29e-07!44;CL:0002319!2.56e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.98e-16,23;CL:0000337,2.98e-16,23;CL:0000540,2.80e-13,33;CL:0000047,2.80e-13,33;CL:0000031,2.80e-13,33;CL:0000404,2.80e-13,33;CL:0000393,3.00e-10,39;CL:0000211,3.00e-10,39;CL:0000221,3.31e-09,44;CL:0000133,3.31e-09,44;CL:0002319,1.01e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.52e-30!71;UBERON:0003075!3.52e-30!71;UBERON:0007284!3.52e-30!71;UBERON:0000033!1.29e-27!63;UBERON:0001017!2.36e-26!73;UBERON:0005743!2.36e-26!73;UBERON:0004121!2.70e-26!102;UBERON:0000924!2.70e-26!102;UBERON:0006601!2.70e-26!102;UBERON:0000073!3.33e-25!75;UBERON:0001016!3.33e-25!75;UBERON:0001049!8.45e-25!52;UBERON:0005068!8.45e-25!52;UBERON:0006241!8.45e-25!52;UBERON:0007135!8.45e-25!52;UBERON:0000955!3.32e-24!50;UBERON:0006238!3.32e-24!50;UBERON:0003056!7.02e-24!49;UBERON:0002616!2.27e-23!49;UBERON:0003080!1.28e-19!40;UBERON:0002780!6.05e-19!39;UBERON:0001890!6.05e-19!39;UBERON:0006240!6.05e-19!39;UBERON:0002020!5.15e-17!34;UBERON:0002791!2.62e-14!29;UBERON:0003528!2.62e-14!29;UBERON:0001893!2.62e-14!29;UBERON:0007811!3.45e-12!86;UBERON:0000956!4.33e-10!21;UBERON:0001869!4.33e-10!21;UBERON:0000203!4.33e-10!21;UBERON:0000153!2.42e-09!94;UBERON:0002619!6.75e-09!17;UBERON:0002021!5.99e-08!10;UBERON:0000411!5.99e-08!10;UBERON:0001950!5.99e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-41,54;UBERON:0002346,8.43e-41,64;UBERON:0003075,8.43e-41,64;UBERON:0007284,8.43e-41,64;UBERON:0001017,1.80e-39,73;UBERON:0001049,2.62e-38,52;UBERON:0005068,2.62e-38,52;UBERON:0006241,2.62e-38,52;UBERON:0007135,2.62e-38,52;UBERON:0004121,4.49e-38,95;UBERON:0000924,4.49e-38,95;UBERON:0006601,4.49e-38,95;UBERON:0001016,5.42e-38,75;UBERON:0010371,7.12e-37,73;UBERON:0003056,5.60e-34,49;UBERON:0000955,1.41e-33,47;UBERON:0006238,1.41e-33,47;UBERON:0002616,3.88e-32,46;UBERON:0003080,3.86e-29,40;UBERON:0010314,1.37e-28,92;UBERON:0002780,6.04e-28,39;UBERON:0001890,6.04e-28,39;UBERON:0006240,6.04e-28,39;UBERON:0002020,6.43e-26,34;UBERON:0003528,4.83e-21,29;UBERON:0002791,4.83e-21,29;UBERON:0001893,4.83e-21,29;UBERON:0002619,7.36e-15,17;UBERON:0000956,1.43e-14,21;UBERON:0001869,1.43e-14,21;UBERON:0000203,1.43e-14,21;UBERON:0002021,2.56e-13,10;UBERON:0000411,2.56e-13,10;UBERON:0001950,2.56e-13,10;UBERON:0000025,2.23e-10,114;UBERON:0004111,3.75e-10,122;UBERON:0003076,3.53e-09,12;UBERON:0003057,3.53e-09,12;UBERON:0000483,1.59e-08,174;UBERON:0000119,2.90e-08,176;UBERON:0011216,6.77e-08,194;UBERON:0001894,1.14e-07,10;UBERON:0006222,1.14e-07,10;UBERON:0002420,1.14e-07,8;UBERON:0007245,1.14e-07,8;UBERON:0010009,1.14e-07,8;UBERON:0010011,1.14e-07,8;UBERON:0000454,1.14e-07,8;UBERON:0000369,5.09e-07,5;UBERON:0002435,5.09e-07,5;UBERON:0000204,5.09e-07,5;UBERON:0010082,5.09e-07,5;UBERON:0002240,7.17e-07,6;UBERON:0005174,7.17e-07,6;UBERON:0001137,7.17e-07,6|phase1_expression=1.44133962394315,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,2.35030980676646,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.639969691173627,0,1.14846392823004,1.29228598847722,0.646413698057667,0.760093677825496,0.756090389279792,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,0.630974884054146,1.71390590642282,1.32521124570968,1.22490799214954,1.34183659425531,3.67687514644008,4.40463523997555,3.57524546638526,1.99688493233117,3.03338461779446,1.9212405156506,2.6045668527838,3.62937898701795,0.56276261003168,1.83357897332172,2.65165726926301,2.56269025438385,4.10078780815661,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0.45673551887624,0,1.63286352971307,0.520455980298408,0.913396434936424,0.461230994512117,0.904335843315735,1.41106448562846,0.502666365318702,0.741584903203122,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,3.59497534571574,5.94750783664214,4.39790232395025,3.65031072403781,2.55715457330331,3.74018480207208,4.05603157669394,0.101839363850316,0.124406970610093,0.758168275301024,1.26265113531884,0.650602214813519,0.919608417733892,1.44049703844279,1.50704817835715,2.99360596265843,2.43416068541215,2.52994656311268,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.13195073617213,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,1.00841762311671,0,0,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0.252946148497029,0,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,2.56880943980467,3.04750385139728,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,1.46127928955656,1.97643888973262,10.2822821254978,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,1.78248689192361,0.316036757935816,0,0,9.87274856685985,0.36012218806262,0.258717367565509,1.71469628025274,3.54680467284547,3.56737635204141,4.11372551505302,1.2178597964584,0.23467170806371,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,0,2.81846469342095,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0,6.7770221114048,5.06357760157895,5.15605962095457,4.29632955859219,4.11049511862385,3.0215755895588,2.02506750069542,4.5032120322422,2.71885445390523,3.10656187051092,0.62272408550506,1.19707462020309,0.512200817262403,0.972426868273176,0,0.551530525350042,0.888986911206461,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.943131706930381,0.936415074698824,0.704276676453562,0.631790158511746,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.1921809497366,0.436039249896986,0.470546902076653,0.676916863133412,0.548783918618318,0.263069711437843,0.814824683075171,0,0.830445126869219,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0.644613162144895,0.191288332068843,0,0|short_description=p5@Rims2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=116838 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81 | |||
|association_with_transcript=-208bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end | |||
|cluster_id=chr15:39029653..39029669,+ | |||
|description=CAGE_peak_5_at_Rims2_5end | |||
|id=chr15:39029653..39029669,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.38e-12!33;CL:0000047!7.38e-12!33;CL:0000031!7.38e-12!33;CL:0000404!7.38e-12!33;CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000393!6.80e-08!39;CL:0000211!6.80e-08!39;CL:0000221!1.29e-07!44;CL:0000133!1.29e-07!44;CL:0002319!2.56e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.98e-16,23;CL:0000337,2.98e-16,23;CL:0000540,2.80e-13,33;CL:0000047,2.80e-13,33;CL:0000031,2.80e-13,33;CL:0000404,2.80e-13,33;CL:0000393,3.00e-10,39;CL:0000211,3.00e-10,39;CL:0000221,3.31e-09,44;CL:0000133,3.31e-09,44;CL:0002319,1.01e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.52e-30!71;UBERON:0003075!3.52e-30!71;UBERON:0007284!3.52e-30!71;UBERON:0000033!1.29e-27!63;UBERON:0001017!2.36e-26!73;UBERON:0005743!2.36e-26!73;UBERON:0004121!2.70e-26!102;UBERON:0000924!2.70e-26!102;UBERON:0006601!2.70e-26!102;UBERON:0000073!3.33e-25!75;UBERON:0001016!3.33e-25!75;UBERON:0001049!8.45e-25!52;UBERON:0005068!8.45e-25!52;UBERON:0006241!8.45e-25!52;UBERON:0007135!8.45e-25!52;UBERON:0000955!3.32e-24!50;UBERON:0006238!3.32e-24!50;UBERON:0003056!7.02e-24!49;UBERON:0002616!2.27e-23!49;UBERON:0003080!1.28e-19!40;UBERON:0002780!6.05e-19!39;UBERON:0001890!6.05e-19!39;UBERON:0006240!6.05e-19!39;UBERON:0002020!5.15e-17!34;UBERON:0002791!2.62e-14!29;UBERON:0003528!2.62e-14!29;UBERON:0001893!2.62e-14!29;UBERON:0007811!3.45e-12!86;UBERON:0000956!4.33e-10!21;UBERON:0001869!4.33e-10!21;UBERON:0000203!4.33e-10!21;UBERON:0000153!2.42e-09!94;UBERON:0002619!6.75e-09!17;UBERON:0002021!5.99e-08!10;UBERON:0000411!5.99e-08!10;UBERON:0001950!5.99e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-41,54;UBERON:0002346,8.43e-41,64;UBERON:0003075,8.43e-41,64;UBERON:0007284,8.43e-41,64;UBERON:0001017,1.80e-39,73;UBERON:0001049,2.62e-38,52;UBERON:0005068,2.62e-38,52;UBERON:0006241,2.62e-38,52;UBERON:0007135,2.62e-38,52;UBERON:0004121,4.49e-38,95;UBERON:0000924,4.49e-38,95;UBERON:0006601,4.49e-38,95;UBERON:0001016,5.42e-38,75;UBERON:0010371,7.12e-37,73;UBERON:0003056,5.60e-34,49;UBERON:0000955,1.41e-33,47;UBERON:0006238,1.41e-33,47;UBERON:0002616,3.88e-32,46;UBERON:0003080,3.86e-29,40;UBERON:0010314,1.37e-28,92;UBERON:0002780,6.04e-28,39;UBERON:0001890,6.04e-28,39;UBERON:0006240,6.04e-28,39;UBERON:0002020,6.43e-26,34;UBERON:0003528,4.83e-21,29;UBERON:0002791,4.83e-21,29;UBERON:0001893,4.83e-21,29;UBERON:0002619,7.36e-15,17;UBERON:0000956,1.43e-14,21;UBERON:0001869,1.43e-14,21;UBERON:0000203,1.43e-14,21;UBERON:0002021,2.56e-13,10;UBERON:0000411,2.56e-13,10;UBERON:0001950,2.56e-13,10;UBERON:0000025,2.23e-10,114;UBERON:0004111,3.75e-10,122;UBERON:0003076,3.53e-09,12;UBERON:0003057,3.53e-09,12;UBERON:0000483,1.59e-08,174;UBERON:0000119,2.90e-08,176;UBERON:0011216,6.77e-08,194;UBERON:0001894,1.14e-07,10;UBERON:0006222,1.14e-07,10;UBERON:0002420,1.14e-07,8;UBERON:0007245,1.14e-07,8;UBERON:0010009,1.14e-07,8;UBERON:0010011,1.14e-07,8;UBERON:0000454,1.14e-07,8;UBERON:0000369,5.09e-07,5;UBERON:0002435,5.09e-07,5;UBERON:0000204,5.09e-07,5;UBERON:0010082,5.09e-07,5;UBERON:0002240,7.17e-07,6;UBERON:0005174,7.17e-07,6;UBERON:0001137,7.17e-07,6 | |||
|phase1_expression=1.44133962394315,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,2.35030980676646,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.639969691173627,0,1.14846392823004,1.29228598847722,0.646413698057667,0.760093677825496,0.756090389279792,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,0.630974884054146,1.71390590642282,1.32521124570968,1.22490799214954,1.34183659425531,3.67687514644008,4.40463523997555,3.57524546638526,1.99688493233117,3.03338461779446,1.9212405156506,2.6045668527838,3.62937898701795,0.56276261003168,1.83357897332172,2.65165726926301,2.56269025438385,4.10078780815661,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0.45673551887624,0,1.63286352971307,0.520455980298408,0.913396434936424,0.461230994512117,0.904335843315735,1.41106448562846,0.502666365318702,0.741584903203122,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,3.59497534571574,5.94750783664214,4.39790232395025,3.65031072403781,2.55715457330331,3.74018480207208,4.05603157669394,0.101839363850316,0.124406970610093,0.758168275301024,1.26265113531884,0.650602214813519,0.919608417733892,1.44049703844279,1.50704817835715,2.99360596265843,2.43416068541215,2.52994656311268,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.13195073617213,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,1.00841762311671,0,0,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0.252946148497029,0,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,2.56880943980467,3.04750385139728,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,1.46127928955656,1.97643888973262,10.2822821254978,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,1.78248689192361,0.316036757935816,0,0,9.87274856685985,0.36012218806262,0.258717367565509,1.71469628025274,3.54680467284547,3.56737635204141,4.11372551505302,1.2178597964584,0.23467170806371,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,0,2.81846469342095,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0,6.7770221114048,5.06357760157895,5.15605962095457,4.29632955859219,4.11049511862385,3.0215755895588,2.02506750069542,4.5032120322422,2.71885445390523,3.10656187051092,0.62272408550506,1.19707462020309,0.512200817262403,0.972426868273176,0,0.551530525350042,0.888986911206461,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.943131706930381,0.936415074698824,0.704276676453562,0.631790158511746,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.1921809497366,0.436039249896986,0.470546902076653,0.676916863133412,0.548783918618318,0.263069711437843,0.814824683075171,0,0.830445126869219,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p5@Rims2 | |||
}} |
Latest revision as of 18:42, 26 September 2015
Short description: | p5@Rims2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rims2_5end |
Coexpression cluster: | NA |
Association with transcript: | -208bp_to_ENSMUST00000082054, ENSMUST00000110312, ENSMUST00000167407, NM_053271, uc007vod.1, uc007voe.1, uc011zsk.1_5end |
EntrezGene: | Rims2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.98e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.98e-16 | 23 |
neuron | 2.80e-13 | 33 |
neuronal stem cell | 2.80e-13 | 33 |
neuroblast | 2.80e-13 | 33 |
electrically signaling cell | 2.80e-13 | 33 |
electrically responsive cell | 3.00e-10 | 39 |
electrically active cell | 3.00e-10 | 39 |
ectodermal cell | 3.31e-09 | 44 |
neurectodermal cell | 3.31e-09 | 44 |
neural cell | 1.01e-08 | 43 |