FFCP PHASE1:Mm9::chr15:103070873..103070884,+: Difference between revisions
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{{FFCP|EntrezGene=434858|HGNC=|MCL_coexpression_id=81|UniProt=|association_with_transcript=0bp_to_NR_002883,uc012aai.1_5end|description=CAGE_peak_1_at_Gm5643_5end|id=chr15:103070873..103070884,+|ontology_enrichment_celltype=CL:0000063!2.00e-25!66;CL:0000988!3.38e-16!32;CL:0002032!3.38e-16!32;CL:0000037!3.38e-16!32;CL:0000566!3.38e-16!32;CL:0000837!3.38e-16!32;CL:0000144!5.56e-15!121;CL:0000012!5.56e-15!121;CL:0002371!2.47e-13!118;CL:0002320!5.66e-13!46;CL:0000134!5.66e-13!46;CL:0002031!7.99e-13!25;CL:0000548!1.11e-12!115;CL:0000004!1.11e-12!115;CL:0000255!1.11e-12!115;CL:0000219!1.27e-11!54;CL:0000838!8.64e-11!12;CL:0000066!9.09e-11!25;CL:0002076!2.80e-10!15;CL:0000791!4.95e-10!9;CL:0000789!4.95e-10!9;CL:0002420!4.95e-10!9;CL:0002419!4.95e-10!9;CL:0000790!4.95e-10!9;CL:0000084!9.19e-10!11;CL:0000827!9.19e-10!11;CL:0000542!1.20e-09!13;CL:0000051!1.20e-09!13;CL:0000738!3.17e-09!17;CL:0002087!3.17e-09!17;CL:0000624!3.29e-09!8;CL:0000049!5.31e-08!19;CL:0000223!6.08e-08!20;CL:0000034!6.31e-08!97;CL:0000893!1.42e-07!6;CL:0002489!1.42e-07!6;CL:0000898!1.42e-07!6;CL:0000809!1.42e-07!6;CL:0000810!1.42e-07!6;CL:0000895!1.42e-07!6;CL:0000808!1.42e-07!6;CL:0000894!1.42e-07!6;CL:0000806!1.42e-07!6;CL:0000807!1.42e-07!6;CL:0000805!1.42e-07!6;CL:0002425!1.42e-07!6;CL:0002436!1.42e-07!6;CL:0002427!1.42e-07!6;CL:0002428!1.42e-07!6;CL:0002429!1.42e-07!6;CL:0002433!1.42e-07!6;CL:0002431!1.42e-07!6;CL:0002432!1.42e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,2.82e-24,32;CL:0002032,2.82e-24,32;CL:0000037,2.82e-24,32;CL:0000837,2.82e-24,32;CL:0002320,2.24e-21,46;CL:0000134,2.24e-21,46;CL:0002031,1.42e-20,25;CL:0000219,3.49e-20,54;CL:0000838,3.91e-16,12;CL:0002076,2.65e-15,15;CL:0000542,1.18e-14,13;CL:0000051,1.18e-14,13;CL:0000791,1.28e-14,9;CL:0000789,1.28e-14,9;CL:0002420,1.28e-14,9;CL:0002419,1.28e-14,9;CL:0000790,1.28e-14,9;CL:0000084,1.51e-14,11;CL:0000827,1.51e-14,11;CL:0000738,1.83e-14,17;CL:0002087,1.83e-14,17;CL:0000034,4.12e-14,97;CL:0000066,9.36e-14,25;CL:0000624,2.36e-13,8;CL:0000223,1.46e-12,20;CL:0000049,3.77e-11,19;CL:0000893,7.75e-11,6;CL:0002489,7.75e-11,6;CL:0000898,7.75e-11,6;CL:0000809,7.75e-11,6;CL:0000810,7.75e-11,6;CL:0000895,7.75e-11,6;CL:0000808,7.75e-11,6;CL:0000894,7.75e-11,6;CL:0000806,7.75e-11,6;CL:0000807,7.75e-11,6;CL:0000805,7.75e-11,6;CL:0002425,7.75e-11,6;CL:0002436,7.75e-11,6;CL:0002427,7.75e-11,6;CL:0002428,7.75e-11,6;CL:0002429,7.75e-11,6;CL:0002433,7.75e-11,6;CL:0002431,7.75e-11,6;CL:0002432,7.75e-11,6;CL:0000723,1.16e-09,91;CL:0000048,1.16e-09,91;CL:0000763,4.05e-08,16;CL:0002563,9.03e-08,9;CL:0002251,9.03e-08,9;CL:0000553,2.13e-07,6;CL:0000556,2.13e-07,6;CL:0000839,6.71e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.66e-13!46;UBERON:0000344!4.79e-08!15;UBERON:0002193!9.97e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.24e-21,46;UBERON:0000344,4.33e-12,15;UBERON:0001242,8.58e-10,13;UBERON:0001262,8.58e-10,13;UBERON:0004786,8.58e-10,13;UBERON:0002193,8.89e-09,48;UBERON:0002405,8.89e-09,48;UBERON:0000485,7.82e-08,11;UBERON:0003350,9.03e-08,9;UBERON:0004808,9.03e-08,9;UBERON:0001277,9.03e-08,9;UBERON:0002390,1.41e-07,45;UBERON:0003061,1.41e-07,45|phase1_expression=0.80074423552397,2.09385244583617,0,1.51232105653415,1.00179145989269,2.18243053485457,5.13947809310157,7.36002943616985,22.1038293778117,17.7889040004715,35.7845553591305,18.7464573639041,13.0112554747716,6.55653018142481,0,10.9336644390506,13.2916756844348,12.3030244489713,13.8485577941796,9.76096199135469,0,0,19.5899841854202,7.1996590257033,6.8822784320151,0.57423196411502,1.29228598847722,1.50829862880122,5.51067916423484,1.26015064879965,2.88249663851896,5.08024538767705,0,0,1.1554064790051,1.16364251750945,1.42918549383658,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,16.2749127876004,8.70434570413613,8.06625117941913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,11.8890123533099,7.63272757078534,9.27566363845369,3.44169550792555,0,0,0,0,0,0,11.950156211732,9.54016851177919,2.67602497575693,8.98285341900225,2.54805239706646,14.2213340630666,8.87613268145978,9.12095515710355,7.07734223020697,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51611761462433,8.99854096490112,3.68503658511888,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,1.40442637462647,8.23513302767089,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,4.35124547054968,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.71965487990169,2.51912614182584,2.21119958087078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,11.5432695754514,12.2010844988887,11.9198077618496,0,0,0,0,0,0,0,0,4.29632955859219,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm5643}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=434858 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_002883,uc012aai.1_5end | |||
|cluster_id=chr15:103070873..103070884,+ | |||
|description=CAGE_peak_1_at_Gm5643_5end | |||
|id=chr15:103070873..103070884,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.00e-25!66;CL:0000988!3.38e-16!32;CL:0002032!3.38e-16!32;CL:0000037!3.38e-16!32;CL:0000566!3.38e-16!32;CL:0000837!3.38e-16!32;CL:0000144!5.56e-15!121;CL:0000012!5.56e-15!121;CL:0002371!2.47e-13!118;CL:0002320!5.66e-13!46;CL:0000134!5.66e-13!46;CL:0002031!7.99e-13!25;CL:0000548!1.11e-12!115;CL:0000004!1.11e-12!115;CL:0000255!1.11e-12!115;CL:0000219!1.27e-11!54;CL:0000838!8.64e-11!12;CL:0000066!9.09e-11!25;CL:0002076!2.80e-10!15;CL:0000791!4.95e-10!9;CL:0000789!4.95e-10!9;CL:0002420!4.95e-10!9;CL:0002419!4.95e-10!9;CL:0000790!4.95e-10!9;CL:0000084!9.19e-10!11;CL:0000827!9.19e-10!11;CL:0000542!1.20e-09!13;CL:0000051!1.20e-09!13;CL:0000738!3.17e-09!17;CL:0002087!3.17e-09!17;CL:0000624!3.29e-09!8;CL:0000049!5.31e-08!19;CL:0000223!6.08e-08!20;CL:0000034!6.31e-08!97;CL:0000893!1.42e-07!6;CL:0002489!1.42e-07!6;CL:0000898!1.42e-07!6;CL:0000809!1.42e-07!6;CL:0000810!1.42e-07!6;CL:0000895!1.42e-07!6;CL:0000808!1.42e-07!6;CL:0000894!1.42e-07!6;CL:0000806!1.42e-07!6;CL:0000807!1.42e-07!6;CL:0000805!1.42e-07!6;CL:0002425!1.42e-07!6;CL:0002436!1.42e-07!6;CL:0002427!1.42e-07!6;CL:0002428!1.42e-07!6;CL:0002429!1.42e-07!6;CL:0002433!1.42e-07!6;CL:0002431!1.42e-07!6;CL:0002432!1.42e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.82e-24,32;CL:0002032,2.82e-24,32;CL:0000037,2.82e-24,32;CL:0000837,2.82e-24,32;CL:0002320,2.24e-21,46;CL:0000134,2.24e-21,46;CL:0002031,1.42e-20,25;CL:0000219,3.49e-20,54;CL:0000838,3.91e-16,12;CL:0002076,2.65e-15,15;CL:0000542,1.18e-14,13;CL:0000051,1.18e-14,13;CL:0000791,1.28e-14,9;CL:0000789,1.28e-14,9;CL:0002420,1.28e-14,9;CL:0002419,1.28e-14,9;CL:0000790,1.28e-14,9;CL:0000084,1.51e-14,11;CL:0000827,1.51e-14,11;CL:0000738,1.83e-14,17;CL:0002087,1.83e-14,17;CL:0000034,4.12e-14,97;CL:0000066,9.36e-14,25;CL:0000624,2.36e-13,8;CL:0000223,1.46e-12,20;CL:0000049,3.77e-11,19;CL:0000893,7.75e-11,6;CL:0002489,7.75e-11,6;CL:0000898,7.75e-11,6;CL:0000809,7.75e-11,6;CL:0000810,7.75e-11,6;CL:0000895,7.75e-11,6;CL:0000808,7.75e-11,6;CL:0000894,7.75e-11,6;CL:0000806,7.75e-11,6;CL:0000807,7.75e-11,6;CL:0000805,7.75e-11,6;CL:0002425,7.75e-11,6;CL:0002436,7.75e-11,6;CL:0002427,7.75e-11,6;CL:0002428,7.75e-11,6;CL:0002429,7.75e-11,6;CL:0002433,7.75e-11,6;CL:0002431,7.75e-11,6;CL:0002432,7.75e-11,6;CL:0000723,1.16e-09,91;CL:0000048,1.16e-09,91;CL:0000763,4.05e-08,16;CL:0002563,9.03e-08,9;CL:0002251,9.03e-08,9;CL:0000553,2.13e-07,6;CL:0000556,2.13e-07,6;CL:0000839,6.71e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.66e-13!46;UBERON:0000344!4.79e-08!15;UBERON:0002193!9.97e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.24e-21,46;UBERON:0000344,4.33e-12,15;UBERON:0001242,8.58e-10,13;UBERON:0001262,8.58e-10,13;UBERON:0004786,8.58e-10,13;UBERON:0002193,8.89e-09,48;UBERON:0002405,8.89e-09,48;UBERON:0000485,7.82e-08,11;UBERON:0003350,9.03e-08,9;UBERON:0004808,9.03e-08,9;UBERON:0001277,9.03e-08,9;UBERON:0002390,1.41e-07,45;UBERON:0003061,1.41e-07,45 | |||
|phase1_expression=0.80074423552397,2.09385244583617,0,1.51232105653415,1.00179145989269,2.18243053485457,5.13947809310157,7.36002943616985,22.1038293778117,17.7889040004715,35.7845553591305,18.7464573639041,13.0112554747716,6.55653018142481,0,10.9336644390506,13.2916756844348,12.3030244489713,13.8485577941796,9.76096199135469,0,0,19.5899841854202,7.1996590257033,6.8822784320151,0.57423196411502,1.29228598847722,1.50829862880122,5.51067916423484,1.26015064879965,2.88249663851896,5.08024538767705,0,0,1.1554064790051,1.16364251750945,1.42918549383658,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,16.2749127876004,8.70434570413613,8.06625117941913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,11.8890123533099,7.63272757078534,9.27566363845369,3.44169550792555,0,0,0,0,0,0,11.950156211732,9.54016851177919,2.67602497575693,8.98285341900225,2.54805239706646,14.2213340630666,8.87613268145978,9.12095515710355,7.07734223020697,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51611761462433,8.99854096490112,3.68503658511888,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,1.40442637462647,8.23513302767089,0.284163499395593,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,4.35124547054968,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.71965487990169,2.51912614182584,2.21119958087078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,11.5432695754514,12.2010844988887,11.9198077618496,0,0,0,0,0,0,0,0,4.29632955859219,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm5643 | |||
}} |
Latest revision as of 14:54, 26 September 2015
Short description: | p1@Gm5643 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5643_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | 0bp_to_NR_002883, uc012aai.1_5end |
EntrezGene: | Gm5643 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.24e-21 | 46 |
mucosa | 4.33e-12 | 15 |
intestinal mucosa | 8.58e-10 | 13 |
wall of intestine | 8.58e-10 | 13 |
gastrointestinal system mucosa | 8.58e-10 | 13 |
hemolymphoid system | 8.89e-09 | 48 |
immune system | 8.89e-09 | 48 |
simple columnar epithelium | 7.82e-08 | 11 |
epithelium of mucosa | 9.03e-08 | 9 |
gastrointestinal system epithelium | 9.03e-08 | 9 |
intestinal epithelium | 9.03e-08 | 9 |
hematopoietic system | 1.41e-07 | 45 |
blood island | 1.41e-07 | 45 |