FFCP PHASE1:Mm9::chr15:101004527..101004579,+: Difference between revisions
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{{FFCP|EntrezGene=11479|HGNC=|MCL_coexpression_id=1|UniProt=Q61271,Q3TZF1|association_with_transcript=0bp_to_ENSMUST00000000544,NM_007395,uc007xsr.1_5end|description=CAGE_peak_1_at_Acvr1b_5end|id=chr15:101004527..101004579,+|ontology_enrichment_celltype=CL:0000117!6.34e-13!23;CL:0000337!6.34e-13!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.34e-13,23;CL:0000337,6.34e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.28e-18!34;UBERON:0001049!1.15e-17!52;UBERON:0005068!1.15e-17!52;UBERON:0006241!1.15e-17!52;UBERON:0007135!1.15e-17!52;UBERON:0000955!6.30e-17!50;UBERON:0006238!6.30e-17!50;UBERON:0002616!1.60e-16!49;UBERON:0000033!2.14e-15!63;UBERON:0002791!4.34e-15!29;UBERON:0003528!4.34e-15!29;UBERON:0001893!4.34e-15!29;UBERON:0003080!1.19e-14!40;UBERON:0002780!2.42e-14!39;UBERON:0001890!2.42e-14!39;UBERON:0006240!2.42e-14!39;UBERON:0003056!9.90e-14!49;UBERON:0001017!1.83e-12!73;UBERON:0005743!1.83e-12!73;UBERON:0000956!3.86e-11!21;UBERON:0001869!3.86e-11!21;UBERON:0000203!3.86e-11!21;UBERON:0000073!4.08e-11!75;UBERON:0001016!4.08e-11!75;UBERON:0004121!5.78e-10!102;UBERON:0000924!5.78e-10!102;UBERON:0006601!5.78e-10!102;UBERON:0002346!6.93e-10!71;UBERON:0003075!6.93e-10!71;UBERON:0007284!6.93e-10!71;UBERON:0002619!4.03e-09!17;UBERON:0000160!5.60e-09!43;UBERON:0000064!1.38e-08!99;UBERON:0002021!5.84e-08!10;UBERON:0000411!5.84e-08!10;UBERON:0001950!5.84e-08!10;UBERON:0007811!2.00e-07!86;UBERON:0000153!3.10e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-19,54;UBERON:0002020,8.28e-18,34;UBERON:0001049,1.15e-17,52;UBERON:0005068,1.15e-17,52;UBERON:0006241,1.15e-17,52;UBERON:0007135,1.15e-17,52;UBERON:0010371,9.96e-16,73;UBERON:0000955,1.91e-15,47;UBERON:0006238,1.91e-15,47;UBERON:0003528,4.34e-15,29;UBERON:0002791,4.34e-15,29;UBERON:0001893,4.34e-15,29;UBERON:0002616,4.76e-15,46;UBERON:0003080,1.19e-14,40;UBERON:0002346,2.04e-14,64;UBERON:0003075,2.04e-14,64;UBERON:0007284,2.04e-14,64;UBERON:0002780,2.42e-14,39;UBERON:0001890,2.42e-14,39;UBERON:0006240,2.42e-14,39;UBERON:0003056,9.90e-14,49;UBERON:0004121,1.36e-13,95;UBERON:0000924,1.36e-13,95;UBERON:0006601,1.36e-13,95;UBERON:0001017,1.83e-12,73;UBERON:0000956,3.86e-11,21;UBERON:0001869,3.86e-11,21;UBERON:0000203,3.86e-11,21;UBERON:0001016,4.08e-11,75;UBERON:0000160,1.87e-09,31;UBERON:0002619,4.03e-09,17;UBERON:0002021,5.84e-08,10;UBERON:0000411,5.84e-08,10;UBERON:0001950,5.84e-08,10|phase1_expression=13.1322054625931,47.8096308465925,54.5999087267443,53.5361654013089,47.585094344903,31.2255445756115,33.4066076051602,14.5909355488981,10.8407316056783,11.0010327371337,6.67750076079469,6.78063351460359,31.5009343073419,28.2367899813362,4.99664642723494,5.26435695213547,2.79824751251259,15.4576461025536,17.2764186343231,16.5511964201232,22.4514285998824,6.25532992565577,12.015190300391,44.3179011137737,52.3053160833148,32.1569899904411,39.6301036466349,31.2433287394539,51.6863700921337,45.8694836163074,27.4945833212578,1.27006134691926,4.30545351309199,15.8481681015439,30.3294200738838,32.5819904902645,26.7461856703704,47.7126059040075,40.6294379152376,17.7998072951091,32.3527318417058,23.2235464885872,25.24653835762,12.4637849795822,13.3817549209759,11.0128051297009,27.3836970521814,12.8634842264463,24.3851662835264,15.5543919259427,12.5987779462826,10.062679505548,13.2548258785612,17.4086914082723,16.8046899571232,11.3194151855817,18.0516067161417,17.0171790451556,64.7412674750713,61.8919445748278,69.0876229821735,15.2480039431109,15.1180115338894,38.2457379844595,51.4210508534827,35.524005747305,26.664409836138,29.9690278150813,50.1857723573032,49.0071556144037,50.4779907243317,51.7028281770884,50.7997644188711,53.1610068592901,42.172007248024,62.5068774894814,73.7776402695904,45.8397543725824,40.0913051798795,68.05332446878,52.0564692097711,58.8632108729139,40.4815348552002,51.2113975128829,40.7971321564083,56.2740598254705,48.5487431524941,55.174235964289,7.1182621733193,7.85944225110569,18.2614627882057,4.30211938490693,8.83962733820076,8.09554787456726,11.695975514058,13.4408066129201,14.4657752735704,7.83979483859066,7.53379413348319,6.00677276667578,21.4081998060554,17.9657068380045,17.8363667794652,14.2213340630666,15.3708639117962,16.7217511213565,17.6933555755174,19.1828917928021,16.0541487861246,8.75808620482466,9.71517829890361,9.43842982767638,11.0695438682908,7.988299949289,12.2292255421133,6.1576629751541,53.1469180628904,9.68815691363408,13.2691582792481,10.676612096529,11.4837589599405,7.27312879702833,70.8288692628864,44.2099003487436,55.5033773055656,41.3840429437918,5.27186547826049,8.39863823390771,5.33694953706872,37.7472411300153,47.5800626931372,54.0313714085317,62.229106628835,63.417433417922,31.5837827730531,48.0234138680563,10.0820970211813,14.4312085907708,24.7668303265001,33.6706969418358,14.7036100547855,19.0818746679783,17.4660265911189,20.646560043493,23.2004462106028,26.0070852178245,27.1735001223214,27.6812606690747,17.8921434134259,23.26004786064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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11479 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q61271,Q3TZF1 | |||
|association_with_transcript=0bp_to_ENSMUST00000000544,NM_007395,uc007xsr.1_5end | |||
|cluster_id=chr15:101004527..101004579,+ | |||
|description=CAGE_peak_1_at_Acvr1b_5end | |||
|id=chr15:101004527..101004579,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.34e-13!23;CL:0000337!6.34e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.34e-13,23;CL:0000337,6.34e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.28e-18!34;UBERON:0001049!1.15e-17!52;UBERON:0005068!1.15e-17!52;UBERON:0006241!1.15e-17!52;UBERON:0007135!1.15e-17!52;UBERON:0000955!6.30e-17!50;UBERON:0006238!6.30e-17!50;UBERON:0002616!1.60e-16!49;UBERON:0000033!2.14e-15!63;UBERON:0002791!4.34e-15!29;UBERON:0003528!4.34e-15!29;UBERON:0001893!4.34e-15!29;UBERON:0003080!1.19e-14!40;UBERON:0002780!2.42e-14!39;UBERON:0001890!2.42e-14!39;UBERON:0006240!2.42e-14!39;UBERON:0003056!9.90e-14!49;UBERON:0001017!1.83e-12!73;UBERON:0005743!1.83e-12!73;UBERON:0000956!3.86e-11!21;UBERON:0001869!3.86e-11!21;UBERON:0000203!3.86e-11!21;UBERON:0000073!4.08e-11!75;UBERON:0001016!4.08e-11!75;UBERON:0004121!5.78e-10!102;UBERON:0000924!5.78e-10!102;UBERON:0006601!5.78e-10!102;UBERON:0002346!6.93e-10!71;UBERON:0003075!6.93e-10!71;UBERON:0007284!6.93e-10!71;UBERON:0002619!4.03e-09!17;UBERON:0000160!5.60e-09!43;UBERON:0000064!1.38e-08!99;UBERON:0002021!5.84e-08!10;UBERON:0000411!5.84e-08!10;UBERON:0001950!5.84e-08!10;UBERON:0007811!2.00e-07!86;UBERON:0000153!3.10e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-19,54;UBERON:0002020,8.28e-18,34;UBERON:0001049,1.15e-17,52;UBERON:0005068,1.15e-17,52;UBERON:0006241,1.15e-17,52;UBERON:0007135,1.15e-17,52;UBERON:0010371,9.96e-16,73;UBERON:0000955,1.91e-15,47;UBERON:0006238,1.91e-15,47;UBERON:0003528,4.34e-15,29;UBERON:0002791,4.34e-15,29;UBERON:0001893,4.34e-15,29;UBERON:0002616,4.76e-15,46;UBERON:0003080,1.19e-14,40;UBERON:0002346,2.04e-14,64;UBERON:0003075,2.04e-14,64;UBERON:0007284,2.04e-14,64;UBERON:0002780,2.42e-14,39;UBERON:0001890,2.42e-14,39;UBERON:0006240,2.42e-14,39;UBERON:0003056,9.90e-14,49;UBERON:0004121,1.36e-13,95;UBERON:0000924,1.36e-13,95;UBERON:0006601,1.36e-13,95;UBERON:0001017,1.83e-12,73;UBERON:0000956,3.86e-11,21;UBERON:0001869,3.86e-11,21;UBERON:0000203,3.86e-11,21;UBERON:0001016,4.08e-11,75;UBERON:0000160,1.87e-09,31;UBERON:0002619,4.03e-09,17;UBERON:0002021,5.84e-08,10;UBERON:0000411,5.84e-08,10;UBERON:0001950,5.84e-08,10 | |||
|phase1_expression=13.1322054625931,47.8096308465925,54.5999087267443,53.5361654013089,47.585094344903,31.2255445756115,33.4066076051602,14.5909355488981,10.8407316056783,11.0010327371337,6.67750076079469,6.78063351460359,31.5009343073419,28.2367899813362,4.99664642723494,5.26435695213547,2.79824751251259,15.4576461025536,17.2764186343231,16.5511964201232,22.4514285998824,6.25532992565577,12.015190300391,44.3179011137737,52.3053160833148,32.1569899904411,39.6301036466349,31.2433287394539,51.6863700921337,45.8694836163074,27.4945833212578,1.27006134691926,4.30545351309199,15.8481681015439,30.3294200738838,32.5819904902645,26.7461856703704,47.7126059040075,40.6294379152376,17.7998072951091,32.3527318417058,23.2235464885872,25.24653835762,12.4637849795822,13.3817549209759,11.0128051297009,27.3836970521814,12.8634842264463,24.3851662835264,15.5543919259427,12.5987779462826,10.062679505548,13.2548258785612,17.4086914082723,16.8046899571232,11.3194151855817,18.0516067161417,17.0171790451556,64.7412674750713,61.8919445748278,69.0876229821735,15.2480039431109,15.1180115338894,38.2457379844595,51.4210508534827,35.524005747305,26.664409836138,29.9690278150813,50.1857723573032,49.0071556144037,50.4779907243317,51.7028281770884,50.7997644188711,53.1610068592901,42.172007248024,62.5068774894814,73.7776402695904,45.8397543725824,40.0913051798795,68.05332446878,52.0564692097711,58.8632108729139,40.4815348552002,51.2113975128829,40.7971321564083,56.2740598254705,48.5487431524941,55.174235964289,7.1182621733193,7.85944225110569,18.2614627882057,4.30211938490693,8.83962733820076,8.09554787456726,11.695975514058,13.4408066129201,14.4657752735704,7.83979483859066,7.53379413348319,6.00677276667578,21.4081998060554,17.9657068380045,17.8363667794652,14.2213340630666,15.3708639117962,16.7217511213565,17.6933555755174,19.1828917928021,16.0541487861246,8.75808620482466,9.71517829890361,9.43842982767638,11.0695438682908,7.988299949289,12.2292255421133,6.1576629751541,53.1469180628904,9.68815691363408,13.2691582792481,10.676612096529,11.4837589599405,7.27312879702833,70.8288692628864,44.2099003487436,55.5033773055656,41.3840429437918,5.27186547826049,8.39863823390771,5.33694953706872,37.7472411300153,47.5800626931372,54.0313714085317,62.229106628835,63.417433417922,31.5837827730531,48.0234138680563,10.0820970211813,14.4312085907708,24.7668303265001,33.6706969418358,14.7036100547855,19.0818746679783,17.4660265911189,20.646560043493,23.2004462106028,26.0070852178245,27.1735001223214,27.6812606690747,17.8921434134259,23.2600478606418,16.3634545472472,17.9740500590611,23.9120634334014,21.9398864908965,29.221063369928,15.5246728118425,3.51106593656617,5.66165395652373,6.53576048609863,12.8417978972011,19.2311369184499,18.7264543919455,17.0456209621351,20.2667158699826,18.9748548851475,19.5328513590343,22.2666923161684,17.3980360127083,21.8864600384929,14.4467368389604,15.9705554805336,14.4737987551079,12.2948064562988,10.8707199195901,44.581469095595,43.7344602611959,65.0925002478082,33.3207713996066,19.4092307987063,19.9723537799977,22.2940708087221,29.2441110703847,26.2406091736947,27.0120389079834,43.1821446005506,31.2928013975621,37.4489461112402,38.3985991039421,40.9424582950152,45.8397898413653,43.6598860746882,48.5904706740656,13.2767530667157,12.3388393618507,13.5249282807697,16.9030602111611,20.752916126936,19.8484370289602,28.013785946046,34.9836050711657,35.4817124921507,34.6746030620259,8.59712618552732,9.00963570866908,6.4864468387357,5.62155280962134,7.30296436998611,12.5412123071257,15.2775511068852,15.5355914223438,13.619359049103,9.88421087477093,14.3768206527355,17.4906245404197,19.3463357331028,14.3969960429854,10.7638448113147,11.5786445127208,35.1031061316549,15.5382957651798,9.94086356296358,13.4098617762399,18.7752198630802,19.2632196058088,28.5652369063216,35.1240566144038,23.3300013277163,29.0118743439895,25.6722177538554,39.1633322170614,33.6735714638496,38.9105967584266,18.0949540727127,20.668415985111,27.047035016047,27.3177378841685,27.2936002979246,25.5521476771003,6.22952792431367,33.3261623909772,8.83423014365519,8.58965237452605,9.26320610251035,9.08081432219698,8.68914828921337,10.190755108398,8.50102473517278,11.1057226006299,9.09161889277004,42.0930924512567,15.1875891172847,12.6426578603751,11.0763132360432,20.2913251256219,29.2039304347918,19.1796702562435,23.5812374432506,18.6719028958339,26.5771703592696,18.1386737286917,25.3259727304857,27.6285634402904,27.8067955140083,15.485801138855,29.5172104009997,20.6271086496374,17.3624198934432,23.7680644121329,19.9212373025442,28.5068256592018,21.4581682707151,20.8691516594423,22.2141177812863,24.6616608782825,8.68285319835728,40.4599255349897,11.467476698858,33.8016818530034,39.0743912604091,31.4833468124974,39.0347564890256,46.4518746278523,46.0539721875164,22.2510362412612,10.9357363710626,13.8279201535359,7.03739204004904,5.65105371014073,5.74115756428306,8.00723606222829,8.32894306969891,7.55737842547753,6.77179871641677,21.9574242143476,13.28611173040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| |||
|short_description=p1@Acvr1b | |||
}} |
Latest revision as of 12:42, 26 September 2015
Short description: | p1@Acvr1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acvr1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000000544, NM_007395, uc007xsr.1_5end |
EntrezGene: | Acvr1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.34e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.34e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.81e-19 | 54 |
gray matter | 8.28e-18 | 34 |
neural tube | 1.15e-17 | 52 |
neural rod | 1.15e-17 | 52 |
future spinal cord | 1.15e-17 | 52 |
neural keel | 1.15e-17 | 52 |
ecto-epithelium | 9.96e-16 | 73 |
brain | 1.91e-15 | 47 |
future brain | 1.91e-15 | 47 |
brain grey matter | 4.34e-15 | 29 |
regional part of telencephalon | 4.34e-15 | 29 |
telencephalon | 4.34e-15 | 29 |
regional part of brain | 4.76e-15 | 46 |
anterior neural tube | 1.19e-14 | 40 |
neurectoderm | 2.04e-14 | 64 |
neural plate | 2.04e-14 | 64 |
presumptive neural plate | 2.04e-14 | 64 |
regional part of forebrain | 2.42e-14 | 39 |
forebrain | 2.42e-14 | 39 |
future forebrain | 2.42e-14 | 39 |
pre-chordal neural plate | 9.90e-14 | 49 |
ectoderm-derived structure | 1.36e-13 | 95 |
ectoderm | 1.36e-13 | 95 |
presumptive ectoderm | 1.36e-13 | 95 |
central nervous system | 1.83e-12 | 73 |
cerebral cortex | 3.86e-11 | 21 |
cerebral hemisphere | 3.86e-11 | 21 |
pallium | 3.86e-11 | 21 |
nervous system | 4.08e-11 | 75 |
intestine | 1.87e-09 | 31 |
regional part of cerebral cortex | 4.03e-09 | 17 |
occipital lobe | 5.84e-08 | 10 |
visual cortex | 5.84e-08 | 10 |
neocortex | 5.84e-08 | 10 |