FFCP PHASE1:Mm9::chr14:94289893..94289908,-: Difference between revisions
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{{FFCP|EntrezGene=211712|HGNC=|MCL_coexpression_id=1|UniProt=B2RXR7|association_with_transcript=-5bp_to_uc007uun.1,uc007uuo.1_5end|description=CAGE_peak_1_at_Pcdh9_5end|id=chr14:94289893..94289908,-|ontology_enrichment_celltype=CL:0000393!5.20e-13!39;CL:0000211!5.20e-13!39;CL:0000540!3.77e-12!33;CL:0000047!3.77e-12!33;CL:0000031!3.77e-12!33;CL:0000404!3.77e-12!33;CL:0000117!4.47e-12!23;CL:0000337!4.47e-12!23;CL:0000221!2.85e-11!44;CL:0000133!2.85e-11!44;CL:0000055!3.28e-11!50;CL:0002319!9.47e-11!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-22,23;CL:0000337,1.17e-22,23;CL:0000540,1.30e-17,33;CL:0000047,1.30e-17,33;CL:0000031,1.30e-17,33;CL:0000404,1.30e-17,33;CL:0000393,6.06e-17,39;CL:0000211,6.06e-17,39;CL:0000221,4.01e-13,44;CL:0000133,4.01e-13,44;CL:0002319,3.42e-12,43;CL:0002321,1.21e-07,70;CL:0002614,9.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.77e-29!75;UBERON:0001016!1.77e-29!75;UBERON:0001017!1.25e-28!73;UBERON:0005743!1.25e-28!73;UBERON:0001049!2.40e-26!52;UBERON:0005068!2.40e-26!52;UBERON:0006241!2.40e-26!52;UBERON:0007135!2.40e-26!52;UBERON:0004121!2.81e-25!102;UBERON:0000924!2.81e-25!102;UBERON:0006601!2.81e-25!102;UBERON:0000033!2.94e-25!63;UBERON:0000955!7.07e-25!50;UBERON:0006238!7.07e-25!50;UBERON:0002346!1.54e-24!71;UBERON:0003075!1.54e-24!71;UBERON:0007284!1.54e-24!71;UBERON:0002616!3.55e-24!49;UBERON:0003056!1.96e-20!49;UBERON:0003080!8.39e-20!40;UBERON:0002780!4.14e-19!39;UBERON:0001890!4.14e-19!39;UBERON:0006240!4.14e-19!39;UBERON:0002020!5.44e-19!34;UBERON:0002791!2.00e-15!29;UBERON:0003528!2.00e-15!29;UBERON:0001893!2.00e-15!29;UBERON:0007811!2.50e-13!86;UBERON:0000153!1.75e-12!94;UBERON:0000956!2.49e-10!21;UBERON:0001869!2.49e-10!21;UBERON:0000203!2.49e-10!21;UBERON:0000025!5.18e-09!114;UBERON:0004111!1.49e-08!122;UBERON:0002619!1.83e-08!17;UBERON:0002021!5.12e-08!10;UBERON:0000411!5.12e-08!10;UBERON:0001950!5.12e-08!10;UBERON:0003076!4.65e-07!12;UBERON:0003057!4.65e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-41,54;UBERON:0001017,8.47e-39,73;UBERON:0001049,5.33e-38,52;UBERON:0005068,5.33e-38,52;UBERON:0006241,5.33e-38,52;UBERON:0007135,5.33e-38,52;UBERON:0001016,1.85e-37,75;UBERON:0002346,2.73e-34,64;UBERON:0003075,2.73e-34,64;UBERON:0007284,2.73e-34,64;UBERON:0010371,2.55e-32,73;UBERON:0004121,1.14e-31,95;UBERON:0000924,1.14e-31,95;UBERON:0006601,1.14e-31,95;UBERON:0002020,2.18e-31,34;UBERON:0000955,2.62e-30,47;UBERON:0006238,2.62e-30,47;UBERON:0002616,5.81e-29,46;UBERON:0010314,4.65e-26,92;UBERON:0003080,6.28e-25,40;UBERON:0003528,6.71e-24,29;UBERON:0002791,6.71e-24,29;UBERON:0001893,6.71e-24,29;UBERON:0002780,1.37e-23,39;UBERON:0001890,1.37e-23,39;UBERON:0006240,1.37e-23,39;UBERON:0003056,4.35e-22,49;UBERON:0000956,3.09e-15,21;UBERON:0001869,3.09e-15,21;UBERON:0000203,3.09e-15,21;UBERON:0004111,4.92e-15,122;UBERON:0000025,1.06e-14,114;UBERON:0002619,1.40e-14,17;UBERON:0002021,1.42e-13,10;UBERON:0000411,1.42e-13,10;UBERON:0001950,1.42e-13,10;UBERON:0003076,1.93e-13,12;UBERON:0003057,1.93e-13,12;UBERON:0002240,1.21e-10,6;UBERON:0005174,1.21e-10,6;UBERON:0001137,1.21e-10,6;UBERON:0002420,5.06e-10,8;UBERON:0007245,5.06e-10,8;UBERON:0010009,5.06e-10,8;UBERON:0010011,5.06e-10,8;UBERON:0000454,5.06e-10,8;UBERON:0000483,2.63e-09,174;UBERON:0000119,4.47e-09,176;UBERON:0001948,5.28e-09,5;UBERON:0002315,5.28e-09,5;UBERON:0011216,3.30e-08,194;UBERON:0002950,3.92e-08,4;UBERON:0001891,3.92e-08,4;UBERON:0009616,3.92e-08,4;UBERON:0010286,3.92e-08,4;UBERON:0002038,9.78e-07,3;UBERON:0009663,9.78e-07,3;UBERON:0009661,9.78e-07,3;UBERON:0000125,9.78e-07,3;UBERON:0002308,9.78e-07,3|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,0.218025156380447,0,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,1.14613375975503,1.03134418455488,1.01158230429799,1.05798195854407,0,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,1.8664130215526,0.810035629990144,0.420649922702764,4.57041575046086,2.42955395046775,1.22490799214954,1.72521847832825,0,2.20231761998777,13.2794831608595,11.5204899942183,1.71452174049252,3.56801810049398,1.56274011167028,5.58365998002762,5.6276261003168,5.04234217663473,2.65165726926301,9.25415925194169,1.86399445825301,0.454357159999104,0.68014404096107,0,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,1.75668478206928,6.91174132484402,0,0,0,0,2.99581278809645,0.915001205637253,1.50785222535437,3.47648640384553,3.3243009452943,3.1168206683934,3.73154905055843,2.03678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0.919608417733892,1.44049703844279,0.90422890701429,0.544291993210623,0.2562274405697,1.03071897015702,0,0,0.378212160335639,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0,0.324275238183423,0.146199987425332,0,0.134206418760372,4.20579897128254,1.02904612379284,0,0,0,0.232236671860439,0.644337306610467,0,0.444756087689741,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,2.24770825982909,4.57125577709592,0,0,1.26203287766503,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.292255857911312,0,2.24924921495265,0,0.178065603667255,0.977321756121456,0.164970122972535,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,0.540183282093931,0.258717367565509,0.214337035031592,1.06404140185364,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0,4.45020724825223,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.774958940866387,0.675824501963113,0.469428954583016,0.39061315453185,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,2.25900737046827,3.68260189205742,0.572895513439397,4.1244763762485,6.16574267793578,3.0215755895588,3.37511250115903,3.15224842256954,3.17199686288943,4.14208249401456,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0,1.31098110457835,0.640251524048693,1.32101578597911,0,0.347652977834566,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0.949080144993393,0.788035859004508,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.467863216890817,0.644613162144895,0,0,0|short_description=p1@Pcdh9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211712 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B2RXR7 | |||
|association_with_transcript=-5bp_to_uc007uun.1,uc007uuo.1_5end | |||
|cluster_id=chr14:94289893..94289908,- | |||
|description=CAGE_peak_1_at_Pcdh9_5end | |||
|id=chr14:94289893..94289908,- | |||
|ontology_enrichment_celltype=CL:0000393!5.20e-13!39;CL:0000211!5.20e-13!39;CL:0000540!3.77e-12!33;CL:0000047!3.77e-12!33;CL:0000031!3.77e-12!33;CL:0000404!3.77e-12!33;CL:0000117!4.47e-12!23;CL:0000337!4.47e-12!23;CL:0000221!2.85e-11!44;CL:0000133!2.85e-11!44;CL:0000055!3.28e-11!50;CL:0002319!9.47e-11!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-22,23;CL:0000337,1.17e-22,23;CL:0000540,1.30e-17,33;CL:0000047,1.30e-17,33;CL:0000031,1.30e-17,33;CL:0000404,1.30e-17,33;CL:0000393,6.06e-17,39;CL:0000211,6.06e-17,39;CL:0000221,4.01e-13,44;CL:0000133,4.01e-13,44;CL:0002319,3.42e-12,43;CL:0002321,1.21e-07,70;CL:0002614,9.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.77e-29!75;UBERON:0001016!1.77e-29!75;UBERON:0001017!1.25e-28!73;UBERON:0005743!1.25e-28!73;UBERON:0001049!2.40e-26!52;UBERON:0005068!2.40e-26!52;UBERON:0006241!2.40e-26!52;UBERON:0007135!2.40e-26!52;UBERON:0004121!2.81e-25!102;UBERON:0000924!2.81e-25!102;UBERON:0006601!2.81e-25!102;UBERON:0000033!2.94e-25!63;UBERON:0000955!7.07e-25!50;UBERON:0006238!7.07e-25!50;UBERON:0002346!1.54e-24!71;UBERON:0003075!1.54e-24!71;UBERON:0007284!1.54e-24!71;UBERON:0002616!3.55e-24!49;UBERON:0003056!1.96e-20!49;UBERON:0003080!8.39e-20!40;UBERON:0002780!4.14e-19!39;UBERON:0001890!4.14e-19!39;UBERON:0006240!4.14e-19!39;UBERON:0002020!5.44e-19!34;UBERON:0002791!2.00e-15!29;UBERON:0003528!2.00e-15!29;UBERON:0001893!2.00e-15!29;UBERON:0007811!2.50e-13!86;UBERON:0000153!1.75e-12!94;UBERON:0000956!2.49e-10!21;UBERON:0001869!2.49e-10!21;UBERON:0000203!2.49e-10!21;UBERON:0000025!5.18e-09!114;UBERON:0004111!1.49e-08!122;UBERON:0002619!1.83e-08!17;UBERON:0002021!5.12e-08!10;UBERON:0000411!5.12e-08!10;UBERON:0001950!5.12e-08!10;UBERON:0003076!4.65e-07!12;UBERON:0003057!4.65e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-41,54;UBERON:0001017,8.47e-39,73;UBERON:0001049,5.33e-38,52;UBERON:0005068,5.33e-38,52;UBERON:0006241,5.33e-38,52;UBERON:0007135,5.33e-38,52;UBERON:0001016,1.85e-37,75;UBERON:0002346,2.73e-34,64;UBERON:0003075,2.73e-34,64;UBERON:0007284,2.73e-34,64;UBERON:0010371,2.55e-32,73;UBERON:0004121,1.14e-31,95;UBERON:0000924,1.14e-31,95;UBERON:0006601,1.14e-31,95;UBERON:0002020,2.18e-31,34;UBERON:0000955,2.62e-30,47;UBERON:0006238,2.62e-30,47;UBERON:0002616,5.81e-29,46;UBERON:0010314,4.65e-26,92;UBERON:0003080,6.28e-25,40;UBERON:0003528,6.71e-24,29;UBERON:0002791,6.71e-24,29;UBERON:0001893,6.71e-24,29;UBERON:0002780,1.37e-23,39;UBERON:0001890,1.37e-23,39;UBERON:0006240,1.37e-23,39;UBERON:0003056,4.35e-22,49;UBERON:0000956,3.09e-15,21;UBERON:0001869,3.09e-15,21;UBERON:0000203,3.09e-15,21;UBERON:0004111,4.92e-15,122;UBERON:0000025,1.06e-14,114;UBERON:0002619,1.40e-14,17;UBERON:0002021,1.42e-13,10;UBERON:0000411,1.42e-13,10;UBERON:0001950,1.42e-13,10;UBERON:0003076,1.93e-13,12;UBERON:0003057,1.93e-13,12;UBERON:0002240,1.21e-10,6;UBERON:0005174,1.21e-10,6;UBERON:0001137,1.21e-10,6;UBERON:0002420,5.06e-10,8;UBERON:0007245,5.06e-10,8;UBERON:0010009,5.06e-10,8;UBERON:0010011,5.06e-10,8;UBERON:0000454,5.06e-10,8;UBERON:0000483,2.63e-09,174;UBERON:0000119,4.47e-09,176;UBERON:0001948,5.28e-09,5;UBERON:0002315,5.28e-09,5;UBERON:0011216,3.30e-08,194;UBERON:0002950,3.92e-08,4;UBERON:0001891,3.92e-08,4;UBERON:0009616,3.92e-08,4;UBERON:0010286,3.92e-08,4;UBERON:0002038,9.78e-07,3;UBERON:0009663,9.78e-07,3;UBERON:0009661,9.78e-07,3;UBERON:0000125,9.78e-07,3;UBERON:0002308,9.78e-07,3 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.550640256485045,0,0.218025156380447,0,0.777719596297134,0.139986421625363,0,0,0,0,0.514518872071894,1.14613375975503,1.03134418455488,1.01158230429799,1.05798195854407,0,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,1.8664130215526,0.810035629990144,0.420649922702764,4.57041575046086,2.42955395046775,1.22490799214954,1.72521847832825,0,2.20231761998777,13.2794831608595,11.5204899942183,1.71452174049252,3.56801810049398,1.56274011167028,5.58365998002762,5.6276261003168,5.04234217663473,2.65165726926301,9.25415925194169,1.86399445825301,0.454357159999104,0.68014404096107,0,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0,0,1.75668478206928,6.91174132484402,0,0,0,0,2.99581278809645,0.915001205637253,1.50785222535437,3.47648640384553,3.3243009452943,3.1168206683934,3.73154905055843,2.03678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0.919608417733892,1.44049703844279,0.90422890701429,0.544291993210623,0.2562274405697,1.03071897015702,0,0,0.378212160335639,0.527853372491847,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0,0.324275238183423,0.146199987425332,0,0.134206418760372,4.20579897128254,1.02904612379284,0,0,0,0.232236671860439,0.644337306610467,0,0.444756087689741,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,2.24770825982909,4.57125577709592,0,0,1.26203287766503,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0.292255857911312,0,2.24924921495265,0,0.178065603667255,0.977321756121456,0.164970122972535,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,0.540183282093931,0.258717367565509,0.214337035031592,1.06404140185364,0.535106452806212,0.822745103010605,0.304464949114599,0,0,0,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0,4.45020724825223,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.774958940866387,0.675824501963113,0.469428954583016,0.39061315453185,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,2.25900737046827,3.68260189205742,0.572895513439397,4.1244763762485,6.16574267793578,3.0215755895588,3.37511250115903,3.15224842256954,3.17199686288943,4.14208249401456,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0,1.31098110457835,0.640251524048693,1.32101578597911,0,0.347652977834566,0.578727661391115,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0.949080144993393,0.788035859004508,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0.467863216890817,0.644613162144895,0,0,0 | |||
|short_description=p1@Pcdh9 | |||
}} |
Latest revision as of 11:43, 26 September 2015
Short description: | p1@Pcdh9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdh9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -5bp_to_uc007uun.1, uc007uuo.1_5end |
EntrezGene: | Pcdh9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.17e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-22 | 23 |
neuron | 1.30e-17 | 33 |
neuronal stem cell | 1.30e-17 | 33 |
neuroblast | 1.30e-17 | 33 |
electrically signaling cell | 1.30e-17 | 33 |
electrically responsive cell | 6.06e-17 | 39 |
electrically active cell | 6.06e-17 | 39 |
ectodermal cell | 4.01e-13 | 44 |
neurectodermal cell | 4.01e-13 | 44 |
neural cell | 3.42e-12 | 43 |
embryonic cell | 1.21e-07 | 70 |
neuron of the substantia nigra | 9.78e-07 | 3 |