FFCP PHASE1:Hg19::chr4:159443024..159443056,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59350 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19718 | |||
|TSSclassifier=strong | |||
|UniProt=B4DHD1 | |||
|association_with_transcript=0bp_to_ENST00000448688,uc003ipz.2,uc010iqj.1,uc010iqk.2,uc010iql.2,uc010iqm.2,uc010iqn.2,uc010iqo.2,uc011cja.1,uc011cjb.1,uc011cjc.1,uc011cjd.1,uc011cje.1,uc011cjf.1_5end | |||
|cluster_id=chr4:159443024..159443056,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_1_at_RXFP1_5end | |||
|id=chr4:159443024..159443056,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.58e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.03e-13;14!DOID:120;7.96e-09;27!DOID:193;5.29e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.27e-13,14;DOID:120,8.85e-09,27;DOID:193,5.83e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.67e-28!115;UBERON:0002780!2.99e-26!41;UBERON:0001890!2.99e-26!41;UBERON:0006240!2.99e-26!41;UBERON:0001869!2.04e-25!32;UBERON:0003080!2.54e-25!42;UBERON:0001893!7.88e-25!34;UBERON:0002791!9.66e-24!33;UBERON:0002619!8.41e-23!22;UBERON:0002020!1.37e-22!34;UBERON:0003528!1.37e-22!34;UBERON:0001950!5.29e-21!20;UBERON:0000956!3.79e-19!25;UBERON:0000203!3.79e-19!25;UBERON:0001049!3.08e-18!57;UBERON:0005068!3.08e-18!57;UBERON:0006241!3.08e-18!57;UBERON:0007135!3.08e-18!57;UBERON:0002616!2.81e-16!59;UBERON:0000955!6.20e-15!69;UBERON:0006238!6.20e-15!69;UBERON:0003056!1.18e-14!61;UBERON:0003075!4.69e-13!86;UBERON:0007284!4.69e-13!86;UBERON:0001017!7.72e-13!82;UBERON:0005743!1.99e-12!86;UBERON:0002346!7.17e-12!90;UBERON:0000073!4.91e-10!94;UBERON:0001016!4.91e-10!94;UBERON:0000025!8.82e-10!194;UBERON:0004111!1.37e-09!241;UBERON:0000062!1.21e-08!511;UBERON:0000200!1.86e-08!6;UBERON:0000153!1.94e-08!129;UBERON:0007811!1.94e-08!129;UBERON:0003133!2.94e-08!48;UBERON:0000033!5.18e-08!123;UBERON:0005156!9.00e-08!59;UBERON:0000990!9.00e-08!59;UBERON:0000477!3.32e-07!286;UBERON:0002420!3.77e-07!9;UBERON:0007245!3.77e-07!9;UBERON:0010009!3.77e-07!9;UBERON:0010011!3.77e-07!9;UBERON:0000454!3.77e-07!9;UBERON:0001871!4.22e-07!7;UBERON:0002021!6.09e-07!5;UBERON:0001872!7.53e-07!5;UBERON:0003134!7.58e-07!37;UBERON:0000474!7.58e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.14e-37;22!UBERON:0001869;1.29e-35;32!UBERON:0001950;4.95e-34;20!UBERON:0002791;5.38e-33;32!UBERON:0001893;4.94e-32;34!UBERON:0000956;6.47e-32;25!UBERON:0000203;6.47e-32;25!UBERON:0003528;2.17e-30;34!UBERON:0002020;2.17e-30;34!UBERON:0002780;6.91e-24;41!UBERON:0001890;6.91e-24;41!UBERON:0000073;1.76e-13;53!UBERON:0002616;1.76e-13;53!UBERON:0000200;5.42e-13;6!UBERON:0000955;2.36e-11;68!UBERON:0002021;1.62e-10;5!UBERON:0001872;2.73e-10;5!UBERON:0001017;7.57e-10;75!UBERON:0000992;9.16e-10;13!UBERON:0001871;3.83e-09;6!UBERON:0002420;6.60e-09;9!UBERON:0007245;6.60e-09;9!UBERON:0010009;6.60e-09;9!UBERON:0010011;6.60e-09;9!UBERON:0000454;6.60e-09;9!UBERON:0000349;7.38e-09;5!UBERON:0000369;4.37e-08;4!UBERON:0002435;4.37e-08;4!UBERON:0000204;4.37e-08;4!UBERON:0000991;6.20e-08;21!UBERON:0001870;1.74e-07;3!UBERON:0003134;4.65e-07;33!UBERON:0005904;8.67e-07;4!UBERON:0001016;8.87e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.80e-40,32;UBERON:0001893,2.52e-37,34;UBERON:0002619,3.01e-37,22;UBERON:0002791,6.92e-37,32;UBERON:0002780,2.75e-34,41;UBERON:0001890,2.75e-34,41;UBERON:0003080,2.75e-34,41;UBERON:0006240,2.75e-34,41;UBERON:0003528,2.84e-34,34;UBERON:0002020,2.84e-34,34;UBERON:0001950,3.00e-34,20;UBERON:0000956,4.06e-32,25;UBERON:0000203,4.06e-32,25;UBERON:0000073,1.53e-24,53;UBERON:0002616,1.53e-24,53;UBERON:0001049,9.30e-23,56;UBERON:0005068,9.30e-23,56;UBERON:0006241,9.30e-23,56;UBERON:0007135,9.30e-23,56;UBERON:0003056,1.30e-21,61;UBERON:0000955,2.99e-21,68;UBERON:0006238,2.99e-21,68;UBERON:0007023,5.66e-18,114;UBERON:0001017,1.14e-17,81;UBERON:0003075,5.78e-16,82;UBERON:0007284,5.78e-16,82;UBERON:0001016,5.65e-15,89;UBERON:0002346,8.50e-15,86;UBERON:0000200,5.34e-13,6;UBERON:0010371,1.47e-12,104;UBERON:0002021,1.70e-10,5;UBERON:0001872,2.42e-10,5;UBERON:0000992,9.13e-10,13;UBERON:0001871,2.72e-09,6;UBERON:0000349,5.00e-09,5;UBERON:0002420,5.45e-09,9;UBERON:0007245,5.45e-09,9;UBERON:0010009,5.45e-09,9;UBERON:0010011,5.45e-09,9;UBERON:0000454,5.45e-09,9;UBERON:0003133,9.63e-09,48;UBERON:0010314,1.15e-08,132;UBERON:0000025,2.21e-08,192;UBERON:0000369,4.07e-08,4;UBERON:0002435,4.07e-08,4;UBERON:0000204,4.07e-08,4;UBERON:0010082,4.07e-08,4;UBERON:0000991,5.47e-08,21;UBERON:0009196,5.47e-08,21;UBERON:0009117,5.47e-08,21;UBERON:0005564,5.47e-08,21;UBERON:0003134,1.07e-07,37;UBERON:0000474,1.07e-07,37;UBERON:0004176,1.61e-07,22;UBERON:0001870,1.69e-07,3;UBERON:0005156,4.86e-07,59;UBERON:0000990,4.86e-07,59;UBERON:0005904,7.09e-07,4;UBERON:0004111,9.86e-07,240 | |||
|phase1_expression=0,0.428201047781966,0,0,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863077176966451,2.0492856522328,3.07426898855161,0,0,0,0,0,0,0,0,0,1.31940520074686,1.59570926097305,1.27867425159808,0,0,0.622822248995575,1.00499466102697,2.08593167368081,1.73751075764093,0.605399502633369,0.368277635987565,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,3.86388272718252,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,2.58152958673932,0.354668382198357,2.80338800071154,0,0,0,0.404132016209064,0.653847612453835,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.516628905878827,0,0,0,0,0,0,0.277064115484183,0,0,0,1.70148274740032,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,2.18196896472668,0,0,0,0,0,0,0,0,0,0,8.35862270457562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.234282829985426,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,13.2454439475718,0,0,0,3.43499728180779,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,4.14312932373184,0,1.09199929126389,0,1.13008116620243,0.551365343546124,4.64407282668854,4.38450885253763,0,0,0.202910376962704,0,0,0,0,0,2.83808851256478,0,0,0,0,0,0,0,4.5189024372854,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,3.25559129225023,0,0,0,17.3458356065226,0,7.51903431270201,4.06300266723848,8.18999183028868,2.82519590067467,0,6.87010689511529,18.127205094199,16.9993841998236,19.5213495802933,0,0,0,0,0,0,1.30998378285754,0,0.36408156524854,0,0,0.23874448473769,0,0,1.9882952955326,1.54736358051564,0,0,0,0.597743964753209,0.276283915531148,0,0,0,13.6857418571195,0,0,4.09257896181497,0.295930216910801,0,0,2.90799823828566,9.09127361986142,3.99227596002388,0,0,0,0,0,0,0,0,0,3.54296554325536,3.97968247463846,0,0,0,4.8264787373874,0,0,3.15496059865568,0,0,0,0,7.33702667383415,6.59502672493409,4.79731298416771,0,0.31396051279005,0,0,0,0,0,0.476809736941136,0,93.5323990751916,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,1.40558667435203,0,0,0,2.36750641709634,0,1.53036380815245,0.31593289814244,0,0,0,0,0,0,9.96133411104275,0,0.347119476670262,0,0,1.39781334593624,0,0,0,0,0.290967049465258,0,0,0,0,17.220536499999,0,0,0.640358984218058,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,3.97614844904652,2.45166131000836,0,0,0,0,0,15.0658900511901,0,2.83700546277113,0.472091293214983,0,0,0,0,0,0,3.25799761052228,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0,1.90517903781507,0,0.129282956361551,0,0,0,8.43620559284788,29.0827964434382,7.87054205159671,0,0,0,0,0,0,0,0,0,22.1517044991746,19.89028117902,13.771002377715,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0.147855149989634,1.43367090447332,0,2.32894435314389,8.29412415681711,0,2.60872530905867,1.05180326298053,11.0433511528951,2.03435366602331,0,1.71856891267982,2.32016879939247,5.97143833047924,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,10.0928658390763,0,0,0,0,0,0,0,0.960225567247268,0,11.3503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6620513660123,19.8375206855819,7.82205909380041,10.2558182120378,7.31007919042983,6.15499546931539,11.3032951942296,0,0,0,0,0,0,0,0,1.50420656698514,0,0,0,0,0,12.494453154403,17.1837181695046,14.2613889585817,9.95628220044337,1.64092442705466,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,13.748867375209,0,0,0.339848664884159,9.80014326086451,0,0.111231401892069,0.39246546425257,4.24212092773205,0,0,0,0,1.1436247068265,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0.22910686854405,0,0,138.029602838476,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,7.61504690138245,1.30905207102113,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0,6.63335551567024,0.413731983447581,0.426467963801962,0.952257725854961,0,0.186224142887574,0,0.572824424503484,1.41482032270754,0.435433495793923,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,7.70121098352059,8.95171592294625,0.6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| |||
|short_description=p1@RXFP1 | |||
}} |
Latest revision as of 10:53, 16 September 2015
Short description: | p1@RXFP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RXFP1_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 0bp_to_ENST00000448688, uc003ipz.2, uc010iqj.1, uc010iqk.2, uc010iql.2, uc010iqm.2, uc010iqn.2, uc010iqo.2, uc011cja.1, uc011cjb.1, uc011cjc.1, uc011cjd.1, uc011cje.1, uc011cjf.1_5end |
EntrezGene: | RXFP1 |
HGNC: | 19718 |
UniProt: | B4DHD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.27e-13 | 14 |
female reproductive organ cancer | 8.85e-09 | 27 |
reproductive organ cancer | 5.83e-08 | 29 |