FFCP PHASE1:Mm9::chr14:59820111..59820150,+: Difference between revisions
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{{FFCP|EntrezGene=71330|HGNC=|MCL_coexpression_id=24|UniProt=Q6NXM2|association_with_transcript=32bp_to_ENSMUST00000022551_5end|description=CAGE_peak_3_at_Rcbtb1_5end|id=chr14:59820111..59820150,+|ontology_enrichment_celltype=CL:0000066!3.69e-07!25;CL:0002563!5.25e-07!9;CL:0002251!5.25e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,3.32e-07,25;CL:0002563,5.19e-07,9;CL:0002251,5.19e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.59e-15!43;UBERON:0001007!1.62e-11!128;UBERON:0001555!1.62e-11!128;UBERON:0007026!1.62e-11!128;UBERON:0004119!6.36e-11!130;UBERON:0000925!6.36e-11!130;UBERON:0006595!6.36e-11!130;UBERON:0004921!1.25e-10!126;UBERON:0004185!1.25e-10!126;UBERON:0005409!1.89e-10!59;UBERON:0000344!2.90e-10!15;UBERON:0001242!4.09e-09!13;UBERON:0000060!4.09e-09!13;UBERON:0001262!4.09e-09!13;UBERON:0004786!4.09e-09!13;UBERON:0002107!1.07e-07!22;UBERON:0007499!1.07e-07!22;UBERON:0006925!1.07e-07!22;UBERON:0009497!1.07e-07!22;UBERON:0000015!1.07e-07!22;UBERON:0002423!1.07e-07!22;UBERON:0006235!1.07e-07!22;UBERON:0008835!1.07e-07!22;UBERON:0003894!1.07e-07!22;UBERON:0004161!1.07e-07!22;UBERON:0008836!1.07e-07!22;UBERON:0009854!1.70e-07!23;UBERON:0009856!1.70e-07!23;UBERON:0002365!3.08e-07!25;UBERON:0002330!3.08e-07!25;UBERON:0003350!5.25e-07!9;UBERON:0004808!5.25e-07!9;UBERON:0001277!5.25e-07!9;UBERON:0003929!6.84e-07!55;UBERON:0000485!8.95e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.46e-13,31;UBERON:0000344,2.85e-10,15;UBERON:0001242,4.03e-09,13;UBERON:0001262,4.03e-09,13;UBERON:0004786,4.03e-09,13;UBERON:0001007,7.64e-09,116;UBERON:0001555,7.64e-09,116;UBERON:0007026,7.64e-09,116;UBERON:0004119,2.76e-08,118;UBERON:0000925,2.76e-08,118;UBERON:0006595,2.76e-08,118;UBERON:0004921,4.60e-08,114;UBERON:0005409,7.44e-08,47;UBERON:0002107,1.06e-07,22;UBERON:0007499,1.06e-07,22;UBERON:0006925,1.06e-07,22;UBERON:0009497,1.06e-07,22;UBERON:0000015,1.06e-07,22;UBERON:0002423,1.06e-07,22;UBERON:0006235,1.06e-07,22;UBERON:0008835,1.06e-07,22;UBERON:0003894,1.06e-07,22;UBERON:0004161,1.06e-07,22;UBERON:0008836,1.06e-07,22;UBERON:0009854,1.68e-07,23;UBERON:0009856,1.68e-07,23;UBERON:0002365,3.04e-07,25;UBERON:0002330,3.04e-07,25;UBERON:0003350,5.19e-07,9;UBERON:0004808,5.19e-07,9;UBERON:0001277,5.19e-07,9;UBERON:0011216,6.10e-07,194;UBERON:0003929,6.34e-07,55;UBERON:0000485,8.86e-07,11|phase1_expression=5.44506080156299,77.4725404959382,93.7298433142444,49.3016664430133,46.0824071550639,34.2473714700255,32.4721570427781,11.7502224331834,6.75785866328,8.42632294759177,2.05461561870606,1.91453181588807,14.8944635040149,12.5885379483356,2.99798785634096,2.22722794128809,0,2.5236973228659,2.4680598049033,2.97072756258621,2.63634199468316,0.595745707205312,0,14.5593104742,19.0409703285751,63.1655160526522,44.3684856043847,45.6799013294085,9.31114755336232,17.8941392129551,14.8559442139054,1.27006134691926,0.61506478758457,0,13.5760261283099,11.137721239019,13.8835162258411,0.418531630736908,0,0,0,0,0,2.7697299954627,3.14268486780495,3.12029478674859,0.782391344348039,0.872100625521786,0.659058548203415,0.388859798148567,1.53985063787899,0,5.03347818173209,7.25362142011344,6.04968838456435,1.54355661621568,0.286533439938757,2.57836046138721,3.43937983461316,5.28990979272033,5.70448263155561,2.03306719241479,3.55717918444456,0,0,0,0,0,5.39185984004084,3.91517221161903,5.04779907243317,1.99955689082663,1.54607978666129,3.55223317723367,2.58782771749238,5.51531271966013,4.40463523997555,7.91661496128164,8.90917892886212,3.82470234417562,2.8361169516747,2.08365348222704,8.65467296904281,5.06486349028512,8.55670187550137,2.35702868378934,1.28134512719193,2.23679334990361,2.19605960666234,2.34271836331035,5.50742528533188,16.3480536626463,6.11974200336975,20.5087212822371,16.2444104361917,20.6092368064774,8.42666520790511,1.53387290320252,1.29893002301434,1.7666978725517,4.22530259330042,1.28326477414318,2.54805239706646,0,4.32982082022428,3.54703811665138,3.53867111510348,10.7332846935916,4.14300613835475,1.92974780784272,2.94925055502431,0.608930956624282,1.38369298353635,1.80867168663147,3.41007250693544,2.38766523526383,3.70792451601561,1.59059292611903,2.65383165584962,1.94120219936891,1.76673214768315,3.39412677194655,3.72783522436244,5.85561594023094,7.95897485891129,9.70736809792647,1.31796636956512,0,0.635351135365324,5.54225365797844,3.66000482254901,2.76439574648302,2.9550134432687,2.81287003063364,7.48036960414416,7.46309810111685,4.3790926455636,2.86136032403214,5.05445516867349,72.6024402808335,6.50602214813519,5.74755261083682,3.60124259610698,3.91832526372859,3.94611695077702,3.58718416797579,3.18585863503078,30.2682943764648,10.7783996466421,8.88798576788751,9.32540958068929,6.1374805079721,4.17070873838397,4.179025998266,2.05782136407943,5.57295947091781,0,0.51469581422943,0.284163499395593,2.89976081549703,2.81431271977315,1.2604344302271,2.13070262026689,1.18058539048442,1.07986979021165,1.39520366850245,1.3413670069981,2.1017761626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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71330 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NXM2 | |||
|association_with_transcript=32bp_to_ENSMUST00000022551_5end | |||
|cluster_id=chr14:59820111..59820150,+ | |||
|description=CAGE_peak_3_at_Rcbtb1_5end | |||
|id=chr14:59820111..59820150,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.69e-07!25;CL:0002563!5.25e-07!9;CL:0002251!5.25e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.32e-07,25;CL:0002563,5.19e-07,9;CL:0002251,5.19e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.59e-15!43;UBERON:0001007!1.62e-11!128;UBERON:0001555!1.62e-11!128;UBERON:0007026!1.62e-11!128;UBERON:0004119!6.36e-11!130;UBERON:0000925!6.36e-11!130;UBERON:0006595!6.36e-11!130;UBERON:0004921!1.25e-10!126;UBERON:0004185!1.25e-10!126;UBERON:0005409!1.89e-10!59;UBERON:0000344!2.90e-10!15;UBERON:0001242!4.09e-09!13;UBERON:0000060!4.09e-09!13;UBERON:0001262!4.09e-09!13;UBERON:0004786!4.09e-09!13;UBERON:0002107!1.07e-07!22;UBERON:0007499!1.07e-07!22;UBERON:0006925!1.07e-07!22;UBERON:0009497!1.07e-07!22;UBERON:0000015!1.07e-07!22;UBERON:0002423!1.07e-07!22;UBERON:0006235!1.07e-07!22;UBERON:0008835!1.07e-07!22;UBERON:0003894!1.07e-07!22;UBERON:0004161!1.07e-07!22;UBERON:0008836!1.07e-07!22;UBERON:0009854!1.70e-07!23;UBERON:0009856!1.70e-07!23;UBERON:0002365!3.08e-07!25;UBERON:0002330!3.08e-07!25;UBERON:0003350!5.25e-07!9;UBERON:0004808!5.25e-07!9;UBERON:0001277!5.25e-07!9;UBERON:0003929!6.84e-07!55;UBERON:0000485!8.95e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.46e-13,31;UBERON:0000344,2.85e-10,15;UBERON:0001242,4.03e-09,13;UBERON:0001262,4.03e-09,13;UBERON:0004786,4.03e-09,13;UBERON:0001007,7.64e-09,116;UBERON:0001555,7.64e-09,116;UBERON:0007026,7.64e-09,116;UBERON:0004119,2.76e-08,118;UBERON:0000925,2.76e-08,118;UBERON:0006595,2.76e-08,118;UBERON:0004921,4.60e-08,114;UBERON:0005409,7.44e-08,47;UBERON:0002107,1.06e-07,22;UBERON:0007499,1.06e-07,22;UBERON:0006925,1.06e-07,22;UBERON:0009497,1.06e-07,22;UBERON:0000015,1.06e-07,22;UBERON:0002423,1.06e-07,22;UBERON:0006235,1.06e-07,22;UBERON:0008835,1.06e-07,22;UBERON:0003894,1.06e-07,22;UBERON:0004161,1.06e-07,22;UBERON:0008836,1.06e-07,22;UBERON:0009854,1.68e-07,23;UBERON:0009856,1.68e-07,23;UBERON:0002365,3.04e-07,25;UBERON:0002330,3.04e-07,25;UBERON:0003350,5.19e-07,9;UBERON:0004808,5.19e-07,9;UBERON:0001277,5.19e-07,9;UBERON:0011216,6.10e-07,194;UBERON:0003929,6.34e-07,55;UBERON:0000485,8.86e-07,11 | |||
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| |||
|short_description=p3@Rcbtb1 | |||
}} |
Latest revision as of 04:40, 26 September 2015
Short description: | p3@Rcbtb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rcbtb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 32bp_to_ENSMUST00000022551_5end |
EntrezGene: | Rcbtb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.32e-07 | 25 |
intestinal epithelial cell | 5.19e-07 | 9 |
epithelial cell of alimentary canal | 5.19e-07 | 9 |