FFCP PHASE1:Mm9::chr14:35413322..35413333,-: Difference between revisions
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{{FFCP|EntrezGene=30044|HGNC=|MCL_coexpression_id=57|UniProt=Q9QXZ9,B2C712,A4QPG3|association_with_transcript=0bp_to_ENSMUST00000022331,ENSMUST00000168444,NM_001128599,NM_013887,uc007tbh.2,uc011ziw.1_5end|description=CAGE_peak_1_at_Opn4_5end|id=chr14:35413322..35413333,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!8.78e-22!9;UBERON:0000019!8.78e-22!9;UBERON:0000047!8.78e-22!9;UBERON:0004088!8.78e-22!9;UBERON:0002104!8.78e-22!9;UBERON:0001456!8.78e-22!9;UBERON:0003072!8.78e-22!9;UBERON:0003071!8.78e-22!9;UBERON:0004128!8.78e-22!9;UBERON:0001444!1.87e-17!11;UBERON:0000020!7.87e-16!12;UBERON:0001032!7.87e-16!12;UBERON:0004456!7.87e-16!12;UBERON:0005085!1.86e-14!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.97e-77,9;UBERON:0000019,4.97e-77,9;UBERON:0000047,4.97e-77,9;UBERON:0010312,4.97e-77,9;UBERON:0004088,4.97e-77,9;UBERON:0002104,4.97e-77,9;UBERON:0001456,4.97e-77,9;UBERON:0003072,4.97e-77,9;UBERON:0004128,4.97e-77,9;UBERON:0003071,4.97e-77,9;UBERON:0001444,4.29e-63,11;UBERON:0000020,7.26e-58,12;UBERON:0001032,7.26e-58,12;UBERON:0004456,7.26e-58,12;UBERON:0000033,1.94e-53,13;UBERON:0005085,1.94e-53,13;UBERON:0007811,2.05e-19,36;UBERON:0000153,2.91e-16,43;UBERON:0003056,2.84e-14,49;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,1.43132487258974,1.14951052216736,2.52086981727489,4.21973489940002,4.08218994907967,5.38077625196369,4.49768277886698,6.20888089773638,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0,0,0,0,0|short_description=p1@Opn4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30044 | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QXZ9,B2C712,A4QPG3 | |||
|association_with_transcript=0bp_to_ENSMUST00000022331,ENSMUST00000168444,NM_001128599,NM_013887,uc007tbh.2,uc011ziw.1_5end | |||
|cluster_id=chr14:35413322..35413333,- | |||
|description=CAGE_peak_1_at_Opn4_5end | |||
|id=chr14:35413322..35413333,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!8.78e-22!9;UBERON:0000019!8.78e-22!9;UBERON:0000047!8.78e-22!9;UBERON:0004088!8.78e-22!9;UBERON:0002104!8.78e-22!9;UBERON:0001456!8.78e-22!9;UBERON:0003072!8.78e-22!9;UBERON:0003071!8.78e-22!9;UBERON:0004128!8.78e-22!9;UBERON:0001444!1.87e-17!11;UBERON:0000020!7.87e-16!12;UBERON:0001032!7.87e-16!12;UBERON:0004456!7.87e-16!12;UBERON:0005085!1.86e-14!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.97e-77,9;UBERON:0000019,4.97e-77,9;UBERON:0000047,4.97e-77,9;UBERON:0010312,4.97e-77,9;UBERON:0004088,4.97e-77,9;UBERON:0002104,4.97e-77,9;UBERON:0001456,4.97e-77,9;UBERON:0003072,4.97e-77,9;UBERON:0004128,4.97e-77,9;UBERON:0003071,4.97e-77,9;UBERON:0001444,4.29e-63,11;UBERON:0000020,7.26e-58,12;UBERON:0001032,7.26e-58,12;UBERON:0004456,7.26e-58,12;UBERON:0000033,1.94e-53,13;UBERON:0005085,1.94e-53,13;UBERON:0007811,2.05e-19,36;UBERON:0000153,2.91e-16,43;UBERON:0003056,2.84e-14,49;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,1.43132487258974,1.14951052216736,2.52086981727489,4.21973489940002,4.08218994907967,5.38077625196369,4.49768277886698,6.20888089773638,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0,0,0,0,0 | |||
|short_description=p1@Opn4 | |||
}} |
Latest revision as of 22:26, 25 September 2015
Short description: | p1@Opn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Opn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 0bp_to_ENSMUST00000022331, ENSMUST00000168444, NM_001128599, NM_013887, uc007tbh.2, uc011ziw.1_5end |
EntrezGene: | Opn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.97e-77 | 9 |
camera-type eye | 4.97e-77 | 9 |
simple eye | 4.97e-77 | 9 |
immature eye | 4.97e-77 | 9 |
ocular region | 4.97e-77 | 9 |
visual system | 4.97e-77 | 9 |
face | 4.97e-77 | 9 |
optic cup | 4.97e-77 | 9 |
optic vesicle | 4.97e-77 | 9 |
eye primordium | 4.97e-77 | 9 |
subdivision of head | 4.29e-63 | 11 |
sense organ | 7.26e-58 | 12 |
sensory system | 7.26e-58 | 12 |
entire sense organ system | 7.26e-58 | 12 |
head | 1.94e-53 | 13 |
ectodermal placode | 1.94e-53 | 13 |
craniocervical region | 2.05e-19 | 36 |
anterior region of body | 2.91e-16 | 43 |
pre-chordal neural plate | 2.84e-14 | 49 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |