FFCP PHASE1:Hg19::chr4:103446513..103446530,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7794 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-145bp_to_AB489154,CU690836,EU446640_5end | |||
|cluster_id=chr4:103446513..103446530,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_19_at_NFKB1_5end | |||
|id=chr4:103446513..103446530,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.06e-74!42;CL:0000860!1.63e-68!45;CL:0000766!9.90e-67!76;CL:0002009!1.06e-64!65;CL:0002194!9.25e-64!63;CL:0000576!9.25e-64!63;CL:0000040!9.25e-64!63;CL:0000559!9.25e-64!63;CL:0000557!2.34e-58!71;CL:0000839!2.29e-56!70;CL:0000738!9.58e-54!140;CL:0002087!1.72e-50!119;CL:0002031!1.11e-45!124;CL:0000763!1.22e-43!112;CL:0000049!1.22e-43!112;CL:0000037!5.02e-43!172;CL:0000566!5.02e-43!172;CL:0000988!6.74e-40!182;CL:0002032!6.99e-40!165;CL:0000837!6.99e-40!165;CL:0000134!1.52e-17!358;CL:0002320!6.31e-17!365;CL:0000219!1.46e-15!390;CL:0000048!1.25e-13!430;CL:0000034!1.68e-13!444;CL:0000723!3.08e-13!436;CL:0002393!3.59e-11!9;CL:0002397!3.59e-11!9;CL:0000094!3.71e-09!8;CL:0000623!2.18e-08!3;CL:0000825!2.18e-08!3;CL:0002371!8.32e-07!591;CL:0000063!8.33e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.72e-71;33!CL:0002057;9.72e-71;33!CL:0000473;3.75e-53;39!CL:0000234;3.75e-53;39!CL:0000576;7.75e-37;48!CL:0000766;2.97e-28;69!CL:0000763;3.70e-14;100!CL:0002087;3.40e-13;104!CL:0002393;3.06e-12;6!CL:0002397;3.06e-12;6!CL:0000094;2.95e-09;8!CL:0000738;1.51e-07;136!CL:0000081;7.29e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.33e-81,42;CL:0002057,7.33e-81,42;CL:0000473,2.65e-77,48;CL:0000234,2.65e-77,48;CL:0000766,1.06e-64,72;CL:0002194,3.59e-61,59;CL:0000576,3.59e-61,59;CL:0000040,3.59e-61,59;CL:0000559,3.59e-61,59;CL:0002009,4.34e-59,61;CL:0000839,2.00e-54,66;CL:0000557,1.42e-53,67;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0000738,8.11e-33,136;CL:0002087,5.79e-30,115;CL:0002031,1.40e-28,120;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0000988,2.06e-24,177;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000094,2.70e-09,8;CL:0000219,4.58e-09,386;CL:0002393,2.56e-08,9;CL:0002397,2.56e-08,9;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441;CL:0000081,6.85e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-56;42!CL:0000049;1.98e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.06e-53!80;UBERON:0001474!6.26e-49!86;UBERON:0002390!4.03e-46!102;UBERON:0003061!4.03e-46!102;UBERON:0002193!4.79e-43!112;UBERON:0004765!4.90e-40!101;UBERON:0001434!4.90e-40!101;UBERON:0002405!1.64e-37!115;UBERON:0002204!4.28e-21!167;UBERON:0003081!1.27e-17!216;UBERON:0002384!4.39e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.52e-47,76;UBERON:0001474,2.85e-43,82;UBERON:0004765,3.67e-39,90;UBERON:0002405,8.42e-38,93;UBERON:0002390,1.03e-35,98;UBERON:0003061,1.03e-35,98;UBERON:0001434,6.14e-35,100;UBERON:0002193,4.08e-32,108;UBERON:0002204,1.42e-19,167;UBERON:0003081,1.81e-15,203;UBERON:0002384,1.15e-09,371;UBERON:0000926,1.22e-08,315;UBERON:0004120,1.22e-08,315;UBERON:0006603,1.22e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.08371286321253,0,0,0,0,0,0.587200878669695,4.9859586767869,1.00272223735071,0.868043482863407,0,0,0,0,0,0.242584061187816,3.48643555358527,4.93401465626191,6.50383378879718,0.863077176966451,0.256160706529101,5.67557351732605,8.27389633767885,21.9464792418501,17.6054432572644,0.564727018627814,0.818718450173537,3.37085226667627,10.4068523406107,8.34415470397843,6.39337125799041,0.659702600373432,0,0.426224750532694,11.8985787837719,23.8301794370279,23.0444232128363,0.502497330513487,0.521482918420201,2.6062661364614,10.2917915447673,26.5159897911047,27.8486900947978,0.211255286311942,1.06302149982522,0.838634582033504,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@NFKB1 | |||
}} |
Latest revision as of 04:14, 20 September 2015
Short description: | p19@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_NFKB1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -145bp_to_AB489154, CU690836, EU446640_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.52e-47 | 76 |
bone element | 2.85e-43 | 82 |
skeletal element | 3.67e-39 | 90 |
immune system | 8.42e-38 | 93 |
hematopoietic system | 1.03e-35 | 98 |
blood island | 1.03e-35 | 98 |
skeletal system | 6.14e-35 | 100 |
hemolymphoid system | 4.08e-32 | 108 |
musculoskeletal system | 1.42e-19 | 167 |
lateral plate mesoderm | 1.81e-15 | 203 |
connective tissue | 1.15e-09 | 371 |
mesoderm | 1.22e-08 | 315 |
mesoderm-derived structure | 1.22e-08 | 315 |
presumptive mesoderm | 1.22e-08 | 315 |