FFCP PHASE1:Hg19::chr4:103266626..103266647,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64116 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20862 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C0K1 | |||
|association_with_transcript=0bp_to_ENST00000356736,ENST00000512657_5end | |||
|cluster_id=chr4:103266626..103266647,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_SLC39A8_5end | |||
|id=chr4:103266626..103266647,- | |||
|ontology_enrichment_celltype=CL:0000766!5.15e-22!76;CL:0000839!2.23e-19!70;CL:0000557!3.05e-19!71;CL:0002009!9.04e-19!65;CL:0000860!1.36e-18!45;CL:0000763!3.39e-18!112;CL:0000049!3.39e-18!112;CL:0002194!4.25e-18!63;CL:0000576!4.25e-18!63;CL:0000040!4.25e-18!63;CL:0000559!4.25e-18!63;CL:0002057!9.35e-17!42;CL:0000738!1.41e-15!140;CL:0000037!2.88e-15!172;CL:0000566!2.88e-15!172;CL:0002032!1.41e-14!165;CL:0000837!1.41e-14!165;CL:0002031!6.89e-14!124;CL:0002087!3.98e-13!119;CL:0000988!1.57e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-17;33!CL:0002057;1.77e-17;33!CL:0000473;5.91e-17;39!CL:0000234;5.91e-17;39!CL:0000576;6.59e-11;48!CL:0000766;2.51e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.31e-21,72;CL:0000473,8.45e-20,48;CL:0000234,8.45e-20,48;CL:0000839,1.88e-18,66;CL:0000557,2.58e-18,67;CL:0002009,7.53e-18,61;CL:0002194,3.54e-17,59;CL:0000576,3.54e-17,59;CL:0000040,3.54e-17,59;CL:0000559,3.54e-17,59;CL:0000763,3.67e-17,108;CL:0000049,3.67e-17,108;CL:0000860,4.72e-17,42;CL:0002057,4.72e-17,42;CL:0000738,1.05e-14,136;CL:0000037,2.16e-14,168;CL:0002032,1.04e-13,161;CL:0000837,1.04e-13,161;CL:0002031,4.40e-13,120;CL:0002087,2.50e-12,115;CL:0000988,3.97e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.51e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.27e-14!80;UBERON:0001474!2.69e-13!86;UBERON:0002390!3.45e-11!102;UBERON:0003061!3.45e-11!102;UBERON:0004765!3.11e-10!101;UBERON:0001434!3.11e-10!101;UBERON:0002405!6.08e-09!115;UBERON:0007023!9.31e-09!115;UBERON:0002193!2.63e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.34e-13,76;UBERON:0001474,1.90e-12,82;UBERON:0004765,6.92e-11,90;UBERON:0002390,2.43e-10,98;UBERON:0003061,2.43e-10,98;UBERON:0001434,3.24e-09,100;UBERON:0002405,4.04e-09,93;UBERON:0007023,1.24e-08,114;UBERON:0002193,1.89e-07,108 | |||
|phase1_expression=4.72363786103447,5.78071414505655,3.94672331468719,5.00366491765652,3.5756887554183,12.2127393374052,5.06599756336621,1.89515962028049,6.26845507679612,0.982935746006035,3.48900583986214,3.27662058195258,3.4289707169699,0.74259811776028,2.65117900582333,16.1358035148426,1.80808358407193,2.19093027116212,3.41552959153355,1.23121058076788,2.04000691244253,1.25381888591235,1.43117993565528,3.55873505189499,1.63205431473244,3.97349709889347,4.35133124084712,4.171671409625,9.8341069212226,10.747223146722,7.7408061658038,3.67768489791571,2.409647350226,1.47901604066715,2.24654881682875,1.70603078984906,5.87200878669694,133.512893456182,118.922857349794,59.8950003175751,6.26963327871788,5.83008598834163,5.6666624879521,16.8661956984295,10.9584023669755,11.4014508758274,307.736044863126,164.878323096752,181.487933344531,97.527720997209,61.7347302735133,90.3362118174396,267.177902570879,171.698925833298,119.175308203021,93.5564427526745,83.7821880677587,166.070655004918,306.389976263273,210.850370788994,244.226782055234,12.2044981069085,11.1699648268114,10.6556187633174,822.743191512036,599.726182498535,815.274323935208,28.6423478392687,26.5956288394303,37.1392924445749,652.015264336138,474.709872787971,583.556642440991,2.5350634357433,11.2680278981473,6.49941801075965,7.30136102452218,7.0583139635508,10.6078887220073,0,1.19350006319454,0.182664153764634,3.51992488922645,2.18455444504853,3.55803701545422,1.70692089026603,1.20118796110804,1.14950487990897,0,0,6.83055562931338,5.28513470433845,6.49864487812889,10.5737062863221,57.1718734241167,4.74091352595139,8.45852011489482,9.82526906872912,8.42966145897988,2.50779743086017,2.60737813306872,1.89379122293893,3.89653456815823,4.45641827540694,2.65145316727353,3.98761010250518,4.33286182024025,2.68991771423918,1.43065282315866,1.31550323682941,1.65810010671509,1.73881851441031,3.41059095272739,2.94294910898684,4.18142095219907,1.81294948316106,3.44898444241729,3.77990190030893,5.56643322442906,3.18565414324097,3.25541726928209,0.950452044448374,2.71035214339991,3.07167866770604,1.24930726552346,3.07810427657222,2.46338399076314,13.9108652825065,15.5115313554434,7.67569340578835,9.75227465255847,0.670700859703636,1.91793842765295,1.0843174571537,1.00267582127178,3.33146993609895,0.795285947051099,5.35298357332899,1.60709189178915,1.99556457716308,2.10803485663503,40.2105761777978,0.364295288292542,1.48313777113772,2.92092654289215,5.92041106817509,6.38198210490553,9.53962497221368,1.14398982156026,1.85728750664782,0.596287222100115,0,0.694281003215189,0,0.419499436209906,0.275118041940067,1.04497483268405,0.516833518338658,1.06729878806013,0.33472061276467,0.402829317109147,0,0,1.10298924103761,0.81014194788176,1.16089646769304,1.12264686313085,0.900891843866578,0,0.949265659568129,0.183201743930407,27.6738876615733,42.6558290563158,0.872188104285069,0,0.379891534993739,14.0353731662012,2.58152958673932,12.4133933769425,9.53151920241922,2.1349799145941,1.2333377420858,0.622422070799533,1.75123873690594,2.94231425604226,0.151357427644931,0,0.468642863667593,0,1.1409436430889,1.04614076386261,0.939475989150119,1.13311061057692,1.26405726032024,0.408308342509787,1.35117749042945,2.58314452939414,26.1360628602052,15.8250834738276,0.910161361938026,0,1.34668891163253,0.625592599359821,0.554128230968366,0,0.30648779579902,25.6907080730281,3.40296549480063,0.538168907066586,2.77624605464138,2.33125091275518,0,0.515262646192195,0.515281080091258,0.744467425326359,0.168776332241266,0.0974370051611986,0,0.552299391853796,1.77810662500693,0,0,0.169560592310488,4.63826047591912,3.00020732649918,3.44165514466805,5.12289565744301,5.30119073285941,4.53156377191122,10.4697665565524,3.78481276313443,0.72995471815166,31.2899064659632,7.07565032012174,2.76269842704961,38.5425380266543,12.9938306700525,8.51808960286876,8.26064981382698,9.3994301654558,8.60292987312673,6.972142210957,6.64357733511071,10.2471794201725,8.82996593064057,7.69494313892781,0,2.80483547606892,14.405090396599,4.41026134156626,7.60530208930985,12.7767538168091,13.5881678536723,4.41463099414651,4.79654910318143,2.74508496477641,3.07300799144152,0,1.91005047582099,1.94435734832912,0.651616610620649,0,4.3299402607582,7.41954591840492,1.29149563659404,0.288732895522148,0.925971025153221,1.52203321787679,3.1608175918371,6.00940313466411,48.0123161870425,107.641961964049,195.1527160851,2.81201501960331,2.18376766658517,1.98485136139341,5.46306988487375,3.77824120068151,1.15014803749563,2.46331618947972,3.87413109658195,21.3547959006995,11.9619561336078,14.7703647108865,1.77794104018073,0.763976851116555,0,1.71072446022705,1.64523988325318,1.20137223137567,1.14330573052231,1.00917975910825,0.87192013766656,2.0534720029866,4.00742318849111,7.15312891703765,2.535908257668,1.32969058292435,0,0.514414748524284,0,0.266422179016099,3.28849385413739,0.542621605391443,0,2.28015329005615,2.84313558994037,0,368.961797520933,36.6044052612123,277.52502352139,4.86495122564762,16.072226925828,46.383466686267,1.437749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| |||
|short_description=p1@SLC39A8 | |||
}} |
Latest revision as of 03:45, 20 September 2015
Short description: | p1@SLC39A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC39A8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000356736, ENST00000512657_5end |
EntrezGene: | SLC39A8 |
HGNC: | 20862 |
UniProt: | Q9C0K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.31e-21 | 72 |
defensive cell | 8.45e-20 | 48 |
phagocyte | 8.45e-20 | 48 |
myeloid lineage restricted progenitor cell | 1.88e-18 | 66 |
granulocyte monocyte progenitor cell | 2.58e-18 | 67 |
macrophage dendritic cell progenitor | 7.53e-18 | 61 |
monopoietic cell | 3.54e-17 | 59 |
monocyte | 3.54e-17 | 59 |
monoblast | 3.54e-17 | 59 |
promonocyte | 3.54e-17 | 59 |
myeloid cell | 3.67e-17 | 108 |
common myeloid progenitor | 3.67e-17 | 108 |
classical monocyte | 4.72e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.72e-17 | 42 |
leukocyte | 1.05e-14 | 136 |
hematopoietic stem cell | 2.16e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 4.40e-13 | 120 |
nongranular leukocyte | 2.50e-12 | 115 |
hematopoietic cell | 3.97e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.34e-13 | 76 |
bone element | 1.90e-12 | 82 |
skeletal element | 6.92e-11 | 90 |
hematopoietic system | 2.43e-10 | 98 |
blood island | 2.43e-10 | 98 |
skeletal system | 3.24e-09 | 100 |
immune system | 4.04e-09 | 93 |
adult organism | 1.24e-08 | 114 |
hemolymphoid system | 1.89e-07 | 108 |