FFCP PHASE1:Hg19::chr9:97563106..97563117,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:97563106..97563117,+
|short_description=p@chr9:97563106..97563117,+
|description=CAGE_peak_at_chr9:97563106..97563117,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:97563106..97563117,+ | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_at_chr9:97563106..97563117,+ | |||
|id=chr9:97563106..97563117,+ | |||
|ontology_enrichment_celltype=CL:0000667!1.02e-07!6;CL:0000058!1.02e-07!6;CL:0000138!1.02e-07!6;CL:0000153!2.26e-07!9;CL:0000447!2.26e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.86e-30;6!CL:0000153;1.42e-20;9!CL:0000447;1.42e-20;9!CL:0000327;1.25e-12;15!CL:0002602;3.52e-11;2!CL:0000151;2.90e-09;36!CL:0002623;5.36e-08;3!CL:0002615;7.02e-08;3!CL:0000346;7.02e-08;3!CL:1000428;7.02e-08;3!CL:0002178;7.02e-08;3!CL:0000499;4.83e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.52e-30,6;CL:0000138,1.52e-30,6;CL:0000153,1.24e-20,9;CL:0000447,1.24e-20,9;CL:0000327,1.15e-12,15;CL:0002602,3.35e-11,2;CL:0000151,2.87e-09,36;CL:0002623,5.18e-08,3;CL:0000346,6.34e-08,3;CL:1000428,6.34e-08,3;CL:0002178,7.26e-08,3;CL:0002615,8.29e-08,3;CL:0000499,4.63e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.52e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.53e-21;1!DOID:3149;1.53e-21;1!DOID:3451;1.82e-11;2!DOID:4159;1.82e-11;2!DOID:0060122;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.53e-21,1;DOID:3149,1.53e-21,1;DOID:3451,1.82e-11,2;DOID:4159,1.82e-11,2;DOID:0060122,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.77e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;3.52e-11;2!UBERON:0001995;3.52e-11;2!UBERON:0004715;3.52e-11;2!UBERON:0002418;7.02e-08;3!UBERON:0004755;7.02e-08;3!UBERON:0000412;7.02e-08;3!UBERON:0001992;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,3.35e-11,2;UBERON:0001995,3.35e-11,2;UBERON:0004715,3.35e-11,2;UBERON:0000412,6.34e-08,3;UBERON:0001992,6.34e-08,3;UBERON:0002418,6.78e-08,3;UBERON:0004755,6.78e-08,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.37129905888014,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.59331170856906,2.3858578411533,15.5723158496843,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,1.19548792950642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0.126621591911757,0,0,0,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,22.1386893815516,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.672567444437648,0,0.227662191351298,0.443511850813194,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,2.3900586793153,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0.653150243690884,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0.988077223172456,0,0.488965776731466,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.37129905888014,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.59331170856906,2.3858578411533,15.5723158496843,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,1.19548792950642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0.126621591911757,0,0,0,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,22.1386893815516,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.672567444437648,0,0.227662191351298,0.443511850813194,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,2.3900586793153,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0.653150243690884,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0.988077223172456,0,0.488965776731466,0,0,0,0 | ||
|short_description=p@chr9:97563106..97563117,+ | |||
}} | }} |
Latest revision as of 03:43, 1 August 2015
Short description: | p@chr9:97563106..97563117, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:97563106..97563117, + |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.52e-30 | 6 |
chondrocyte | 1.52e-30 | 6 |
GAG secreting cell | 1.24e-20 | 9 |
carbohydrate secreting cell | 1.24e-20 | 9 |
extracellular matrix secreting cell | 1.15e-12 | 15 |
annulus pulposus cell | 3.35e-11 | 2 |
secretory cell | 2.87e-09 | 36 |
acinar cell of salivary gland | 5.18e-08 | 3 |
hair follicle dermal papilla cell | 6.34e-08 | 3 |
stem cell of epidermis | 6.34e-08 | 3 |
epithelial cell of stomach | 7.26e-08 | 3 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
stromal cell | 4.63e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 3.35e-11 | 2 |
fibrocartilage | 3.35e-11 | 2 |
annulus fibrosus disci intervertebralis | 3.35e-11 | 2 |
dermal papilla | 6.34e-08 | 3 |
papillary layer of dermis | 6.34e-08 | 3 |
cartilage tissue | 6.78e-08 | 3 |
skeletal tissue | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.53e-21 | 1 |
keratoacanthoma | 1.53e-21 | 1 |
skin carcinoma | 1.82e-11 | 2 |
skin cancer | 1.82e-11 | 2 |
integumentary system cancer | 1.82e-11 | 2 |