FFCP PHASE1:Mm9::chr13:73484788..73484813,-: Difference between revisions
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{{FFCP|EntrezGene=432777|HGNC=|MCL_coexpression_id=11|UniProt=|association_with_transcript=18bp_to_NR_045293,uc007rdj.1_5end|description=CAGE_peak_1_at_D630045M09Rik_5end|id=chr13:73484788..73484813,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,8.50e-08,1;CL:0002078,8.50e-08,1;CL:0000115,8.50e-08,1;CL:0002262,8.50e-08,1;CL:1000398,8.50e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!3.24e-13!14;UBERON:0003918!3.24e-13!14;UBERON:0005095!3.24e-13!14;UBERON:0007687!3.24e-13!14;UBERON:0003103!5.01e-12!43;UBERON:0006554!4.40e-11!16;UBERON:0001008!3.28e-10!17;UBERON:0005177!4.34e-09!85;UBERON:0002100!1.85e-08!98;UBERON:0009569!9.21e-08!66;UBERON:0004872!9.34e-08!33;UBERON:0000489!1.41e-07!21;UBERON:0004535!1.73e-07!23;UBERON:0001009!1.73e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.65e-44,14;UBERON:0003918,2.65e-44,14;UBERON:0011143,2.65e-44,14;UBERON:0005095,2.65e-44,14;UBERON:0007687,2.65e-44,14;UBERON:0006554,2.88e-34,18;UBERON:0001008,2.04e-32,19;UBERON:0000489,3.05e-29,21;UBERON:0003103,1.14e-16,43;UBERON:0005172,1.39e-14,49;UBERON:0005173,1.39e-14,49;UBERON:0002417,1.39e-14,49;UBERON:0000916,1.39e-14,49;UBERON:0003104,1.80e-11,61;UBERON:0009142,1.80e-11,61;UBERON:0009569,1.66e-10,66;UBERON:0005177,1.47e-08,79;UBERON:0002394,8.50e-08,1;UBERON:0001281,8.50e-08,1;UBERON:0000353,8.50e-08,1;UBERON:0003497,8.50e-08,1;UBERON:0003909,8.50e-08,1;UBERON:0003928,8.50e-08,1;UBERON:0003835,8.50e-08,1;UBERON:0003513,8.50e-08,1;UBERON:0001280,8.50e-08,1;UBERON:0004647,8.50e-08,1;UBERON:0002294,8.50e-08,1;UBERON:0001173,8.50e-08,1;UBERON:0004912,8.50e-08,1;UBERON:0005171,8.50e-08,1;UBERON:0002100,2.39e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0.253359865475099,0,1.1418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.124406970610093,0,0.210441855886474,0,0.689706313300419,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.703578179943289,0.180062061461015,0.473489471170421,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,0.817357396570186,0.658239399653922,0.492502392237286,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.758671603812327,1.02823661348756,4.50830942692322,3.05476991767971,4.07300223052014,5.19005067188357,14.9238227613247,13.2849133181642,14.2868842335651,9.37818445805684,0.889357881261447,0,0,0,0,0.241177159752417,0,0.863088412352432,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0.604647113929502,0.377210159511796,0.295301892880773,0.922305443831782,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0,0,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p1@D630045M09Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=432777 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=18bp_to_NR_045293,uc007rdj.1_5end | |||
|cluster_id=chr13:73484788..73484813,- | |||
|description=CAGE_peak_1_at_D630045M09Rik_5end | |||
|id=chr13:73484788..73484813,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.50e-08,1;CL:0002078,8.50e-08,1;CL:0000115,8.50e-08,1;CL:0002262,8.50e-08,1;CL:1000398,8.50e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.24e-13!14;UBERON:0003918!3.24e-13!14;UBERON:0005095!3.24e-13!14;UBERON:0007687!3.24e-13!14;UBERON:0003103!5.01e-12!43;UBERON:0006554!4.40e-11!16;UBERON:0001008!3.28e-10!17;UBERON:0005177!4.34e-09!85;UBERON:0002100!1.85e-08!98;UBERON:0009569!9.21e-08!66;UBERON:0004872!9.34e-08!33;UBERON:0000489!1.41e-07!21;UBERON:0004535!1.73e-07!23;UBERON:0001009!1.73e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.65e-44,14;UBERON:0003918,2.65e-44,14;UBERON:0011143,2.65e-44,14;UBERON:0005095,2.65e-44,14;UBERON:0007687,2.65e-44,14;UBERON:0006554,2.88e-34,18;UBERON:0001008,2.04e-32,19;UBERON:0000489,3.05e-29,21;UBERON:0003103,1.14e-16,43;UBERON:0005172,1.39e-14,49;UBERON:0005173,1.39e-14,49;UBERON:0002417,1.39e-14,49;UBERON:0000916,1.39e-14,49;UBERON:0003104,1.80e-11,61;UBERON:0009142,1.80e-11,61;UBERON:0009569,1.66e-10,66;UBERON:0005177,1.47e-08,79;UBERON:0002394,8.50e-08,1;UBERON:0001281,8.50e-08,1;UBERON:0000353,8.50e-08,1;UBERON:0003497,8.50e-08,1;UBERON:0003909,8.50e-08,1;UBERON:0003928,8.50e-08,1;UBERON:0003835,8.50e-08,1;UBERON:0003513,8.50e-08,1;UBERON:0001280,8.50e-08,1;UBERON:0004647,8.50e-08,1;UBERON:0002294,8.50e-08,1;UBERON:0001173,8.50e-08,1;UBERON:0004912,8.50e-08,1;UBERON:0005171,8.50e-08,1;UBERON:0002100,2.39e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0.253359865475099,0,1.1418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.124406970610093,0,0.210441855886474,0,0.689706313300419,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.703578179943289,0.180062061461015,0.473489471170421,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,0.817357396570186,0.658239399653922,0.492502392237286,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.758671603812327,1.02823661348756,4.50830942692322,3.05476991767971,4.07300223052014,5.19005067188357,14.9238227613247,13.2849133181642,14.2868842335651,9.37818445805684,0.889357881261447,0,0,0,0,0.241177159752417,0,0.863088412352432,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0.604647113929502,0.377210159511796,0.295301892880773,0.922305443831782,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0,0,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p1@D630045M09Rik | |||
}} |
Latest revision as of 22:11, 1 October 2015
Short description: | p1@D630045M09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D630045M09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 18bp_to_NR_045293, uc007rdj.1_5end |
EntrezGene: | D630045M09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.50e-08 | 1 |
meso-epithelial cell | 8.50e-08 | 1 |
endothelial cell | 8.50e-08 | 1 |
endothelial cell of sinusoid | 8.50e-08 | 1 |
endothelial cell of hepatic sinusoid | 8.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.65e-44 | 14 |
kidney mesenchyme | 2.65e-44 | 14 |
upper urinary tract | 2.65e-44 | 14 |
kidney rudiment | 2.65e-44 | 14 |
kidney field | 2.65e-44 | 14 |
urinary system structure | 2.88e-34 | 18 |
renal system | 2.04e-32 | 19 |
cavitated compound organ | 3.05e-29 | 21 |
compound organ | 1.14e-16 | 43 |
abdomen element | 1.39e-14 | 49 |
abdominal segment element | 1.39e-14 | 49 |
abdominal segment of trunk | 1.39e-14 | 49 |
abdomen | 1.39e-14 | 49 |
mesenchyme | 1.80e-11 | 61 |
entire embryonic mesenchyme | 1.80e-11 | 61 |
subdivision of trunk | 1.66e-10 | 66 |
trunk region element | 1.47e-08 | 79 |
bile duct | 8.50e-08 | 1 |
hepatic sinusoid | 8.50e-08 | 1 |
parenchyma | 8.50e-08 | 1 |
abdomen blood vessel | 8.50e-08 | 1 |
sinusoid | 8.50e-08 | 1 |
digestive system duct | 8.50e-08 | 1 |
abdominal segment blood vessel | 8.50e-08 | 1 |
trunk blood vessel | 8.50e-08 | 1 |
liver parenchyma | 8.50e-08 | 1 |
liver lobule | 8.50e-08 | 1 |
biliary system | 8.50e-08 | 1 |
biliary tree | 8.50e-08 | 1 |
biliary bud | 8.50e-08 | 1 |
hepatic duct | 8.50e-08 | 1 |
trunk | 2.39e-07 | 90 |