FFCP PHASE1:Mm9::chr13:24373161..24373194,-: Difference between revisions
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{{FFCP|EntrezGene=68732|HGNC=|MCL_coexpression_id=2832|UniProt=Q6EDY6|association_with_transcript=-497bp_to_ENSMUST00000072889_5end|description=CAGE_peak_4_at_Lrrc16a_5end|id=chr13:24373161..24373194,-|ontology_enrichment_celltype=CL:0000117!1.89e-14!23;CL:0000337!1.89e-14!23;CL:0000540!2.17e-10!33;CL:0000047!2.17e-10!33;CL:0000031!2.17e-10!33;CL:0000404!2.17e-10!33;CL:0000221!2.49e-08!44;CL:0000133!2.49e-08!44;CL:0002319!6.57e-08!43;CL:0000393!7.69e-08!39;CL:0000211!7.69e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-21,23;CL:0000337,1.14e-21,23;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000221,2.22e-10,44;CL:0000133,2.22e-10,44;CL:0000393,2.43e-10,39;CL:0000211,2.43e-10,39;CL:0002319,9.72e-10,43;CL:0002609,1.84e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.06e-19!73;UBERON:0005743!3.06e-19!73;UBERON:0001049!7.99e-19!52;UBERON:0005068!7.99e-19!52;UBERON:0006241!7.99e-19!52;UBERON:0007135!7.99e-19!52;UBERON:0000073!2.87e-18!75;UBERON:0001016!2.87e-18!75;UBERON:0000033!3.64e-18!63;UBERON:0002020!1.06e-17!34;UBERON:0003056!1.07e-17!49;UBERON:0002346!1.73e-17!71;UBERON:0003075!1.73e-17!71;UBERON:0007284!1.73e-17!71;UBERON:0000955!7.33e-17!50;UBERON:0006238!7.33e-17!50;UBERON:0002616!2.51e-16!49;UBERON:0004121!4.29e-15!102;UBERON:0000924!4.29e-15!102;UBERON:0006601!4.29e-15!102;UBERON:0003080!4.31e-15!40;UBERON:0002780!7.50e-15!39;UBERON:0001890!7.50e-15!39;UBERON:0006240!7.50e-15!39;UBERON:0002791!3.24e-14!29;UBERON:0003528!3.24e-14!29;UBERON:0001893!3.24e-14!29;UBERON:0000153!1.14e-13!94;UBERON:0007811!1.40e-11!86;UBERON:0000956!4.27e-10!21;UBERON:0001869!4.27e-10!21;UBERON:0000203!4.27e-10!21;UBERON:0002619!4.83e-08!17;UBERON:0000468!1.46e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.81e-27,34;UBERON:0002346,2.35e-26,64;UBERON:0003075,2.35e-26,64;UBERON:0007284,2.35e-26,64;UBERON:0000073,7.19e-25,54;UBERON:0001049,2.24e-24,52;UBERON:0005068,2.24e-24,52;UBERON:0006241,2.24e-24,52;UBERON:0007135,2.24e-24,52;UBERON:0001017,2.79e-23,73;UBERON:0010371,2.01e-22,73;UBERON:0001016,3.23e-22,75;UBERON:0004121,1.60e-21,95;UBERON:0000924,1.60e-21,95;UBERON:0006601,1.60e-21,95;UBERON:0003056,3.42e-21,49;UBERON:0003528,4.79e-21,29;UBERON:0002791,4.79e-21,29;UBERON:0001893,4.79e-21,29;UBERON:0000955,2.34e-19,47;UBERON:0006238,2.34e-19,47;UBERON:0003080,1.41e-18,40;UBERON:0002616,1.52e-18,46;UBERON:0002780,3.60e-18,39;UBERON:0001890,3.60e-18,39;UBERON:0006240,3.60e-18,39;UBERON:0010314,1.60e-14,92;UBERON:0000956,2.91e-14,21;UBERON:0001869,2.91e-14,21;UBERON:0000203,2.91e-14,21;UBERON:0002619,6.52e-11,17;UBERON:0002021,1.61e-08,10;UBERON:0000411,1.61e-08,10;UBERON:0001950,1.61e-08,10;UBERON:0002420,5.09e-08,8;UBERON:0007245,5.09e-08,8;UBERON:0010009,5.09e-08,8;UBERON:0010011,5.09e-08,8;UBERON:0000454,5.09e-08,8;UBERON:0002240,1.50e-07,6;UBERON:0005174,1.50e-07,6;UBERON:0001137,1.50e-07,6;UBERON:0001948,4.40e-07,5;UBERON:0002315,4.40e-07,5|phase1_expression=0.480446541314382,0,0,0.90739263392049,1.50268718983904,1.00727563147134,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.65407546914134,0.439372365468944,0.58328969722285,0.55994568650145,2.87505128729943,0.671130424230945,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,3.43937983461316,5.28990979272033,5.70448263155561,0,0,0,0,0,0,0.384218305321555,2.59224030771194,2.70011876663381,3.15487442027073,7.14127461009509,5.30084498283872,4.40966877173835,3.35459148563827,16.5459381589804,3.30347642998166,0.893811366596314,1.99688493233117,3.03338461779446,2.19570344645783,3.12548022334056,3.35019598801657,1.12552522006336,1.68078072554491,3.53554302568401,5.97961059356232,5.59198337475902,0,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0.70667914902068,1.83096445709685,0,7.64415719119937,0,0.432982082022428,0.253359865475099,1.01104889002957,0,0.776813650941515,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.940709657085638,0.376999773989026,0,0,0,0,0.441683036920787,0,0,1.46390398505774,0.41889341362691,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,5.78010019719176,1.39059456153821,1.79000820131231,1.24672826735736,0.973447578406546,1.01839363850316,0.622034853050465,0.252722758433675,1.05220927943237,1.04096354370163,0.689706313300419,0.900310649026746,1.50704817835715,1.36072998302656,1.2811372028485,1.3118241438362,1.29351685369508,1.94011193639558,0.945530400839096,1.23165786914764,1.09597866213787,1.94633074457919,0.696504333044333,0.823128545631774,0.796137067273973,0,0.257347907114715,0,0.414251545071004,0.703578179943289,0.180062061461015,0,0.196764231747404,0.771335564436891,0.465067889500816,0,0.467061369468678,0.16455984991348,0.1641674640790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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68732 | |||
|HGNC= | |||
|MCL_coexpression_id=2832 | |||
|TSSclassifier=NA | |||
|UniProt=Q6EDY6 | |||
|association_with_transcript=-497bp_to_ENSMUST00000072889_5end | |||
|cluster_id=chr13:24373161..24373194,- | |||
|description=CAGE_peak_4_at_Lrrc16a_5end | |||
|id=chr13:24373161..24373194,- | |||
|ontology_enrichment_celltype=CL:0000117!1.89e-14!23;CL:0000337!1.89e-14!23;CL:0000540!2.17e-10!33;CL:0000047!2.17e-10!33;CL:0000031!2.17e-10!33;CL:0000404!2.17e-10!33;CL:0000221!2.49e-08!44;CL:0000133!2.49e-08!44;CL:0002319!6.57e-08!43;CL:0000393!7.69e-08!39;CL:0000211!7.69e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-21,23;CL:0000337,1.14e-21,23;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000221,2.22e-10,44;CL:0000133,2.22e-10,44;CL:0000393,2.43e-10,39;CL:0000211,2.43e-10,39;CL:0002319,9.72e-10,43;CL:0002609,1.84e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.06e-19!73;UBERON:0005743!3.06e-19!73;UBERON:0001049!7.99e-19!52;UBERON:0005068!7.99e-19!52;UBERON:0006241!7.99e-19!52;UBERON:0007135!7.99e-19!52;UBERON:0000073!2.87e-18!75;UBERON:0001016!2.87e-18!75;UBERON:0000033!3.64e-18!63;UBERON:0002020!1.06e-17!34;UBERON:0003056!1.07e-17!49;UBERON:0002346!1.73e-17!71;UBERON:0003075!1.73e-17!71;UBERON:0007284!1.73e-17!71;UBERON:0000955!7.33e-17!50;UBERON:0006238!7.33e-17!50;UBERON:0002616!2.51e-16!49;UBERON:0004121!4.29e-15!102;UBERON:0000924!4.29e-15!102;UBERON:0006601!4.29e-15!102;UBERON:0003080!4.31e-15!40;UBERON:0002780!7.50e-15!39;UBERON:0001890!7.50e-15!39;UBERON:0006240!7.50e-15!39;UBERON:0002791!3.24e-14!29;UBERON:0003528!3.24e-14!29;UBERON:0001893!3.24e-14!29;UBERON:0000153!1.14e-13!94;UBERON:0007811!1.40e-11!86;UBERON:0000956!4.27e-10!21;UBERON:0001869!4.27e-10!21;UBERON:0000203!4.27e-10!21;UBERON:0002619!4.83e-08!17;UBERON:0000468!1.46e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.81e-27,34;UBERON:0002346,2.35e-26,64;UBERON:0003075,2.35e-26,64;UBERON:0007284,2.35e-26,64;UBERON:0000073,7.19e-25,54;UBERON:0001049,2.24e-24,52;UBERON:0005068,2.24e-24,52;UBERON:0006241,2.24e-24,52;UBERON:0007135,2.24e-24,52;UBERON:0001017,2.79e-23,73;UBERON:0010371,2.01e-22,73;UBERON:0001016,3.23e-22,75;UBERON:0004121,1.60e-21,95;UBERON:0000924,1.60e-21,95;UBERON:0006601,1.60e-21,95;UBERON:0003056,3.42e-21,49;UBERON:0003528,4.79e-21,29;UBERON:0002791,4.79e-21,29;UBERON:0001893,4.79e-21,29;UBERON:0000955,2.34e-19,47;UBERON:0006238,2.34e-19,47;UBERON:0003080,1.41e-18,40;UBERON:0002616,1.52e-18,46;UBERON:0002780,3.60e-18,39;UBERON:0001890,3.60e-18,39;UBERON:0006240,3.60e-18,39;UBERON:0010314,1.60e-14,92;UBERON:0000956,2.91e-14,21;UBERON:0001869,2.91e-14,21;UBERON:0000203,2.91e-14,21;UBERON:0002619,6.52e-11,17;UBERON:0002021,1.61e-08,10;UBERON:0000411,1.61e-08,10;UBERON:0001950,1.61e-08,10;UBERON:0002420,5.09e-08,8;UBERON:0007245,5.09e-08,8;UBERON:0010009,5.09e-08,8;UBERON:0010011,5.09e-08,8;UBERON:0000454,5.09e-08,8;UBERON:0002240,1.50e-07,6;UBERON:0005174,1.50e-07,6;UBERON:0001137,1.50e-07,6;UBERON:0001948,4.40e-07,5;UBERON:0002315,4.40e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0.90739263392049,1.50268718983904,1.00727563147134,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.65407546914134,0.439372365468944,0.58328969722285,0.55994568650145,2.87505128729943,0.671130424230945,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,3.43937983461316,5.28990979272033,5.70448263155561,0,0,0,0,0,0,0.384218305321555,2.59224030771194,2.70011876663381,3.15487442027073,7.14127461009509,5.30084498283872,4.40966877173835,3.35459148563827,16.5459381589804,3.30347642998166,0.893811366596314,1.99688493233117,3.03338461779446,2.19570344645783,3.12548022334056,3.35019598801657,1.12552522006336,1.68078072554491,3.53554302568401,5.97961059356232,5.59198337475902,0,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0,0.259786004602869,0.70667914902068,1.83096445709685,0,7.64415719119937,0,0.432982082022428,0.253359865475099,1.01104889002957,0,0.776813650941515,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.940709657085638,0.376999773989026,0,0,0,0,0.441683036920787,0,0,1.46390398505774,0.41889341362691,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,5.78010019719176,1.39059456153821,1.79000820131231,1.24672826735736,0.973447578406546,1.01839363850316,0.622034853050465,0.252722758433675,1.05220927943237,1.04096354370163,0.689706313300419,0.900310649026746,1.50704817835715,1.36072998302656,1.2811372028485,1.3118241438362,1.29351685369508,1.94011193639558,0.945530400839096,1.23165786914764,1.09597866213787,1.94633074457919,0.696504333044333,0.823128545631774,0.796137067273973,0,0.257347907114715,0,0.414251545071004,0.703578179943289,0.180062061461015,0,0.196764231747404,0.771335564436891,0.465067889500816,0,0.467061369468678,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0,0.402619256281115,1.26173969138476,1.9551876352064,0.330418782983798,0,0.639864751605702,0.928946687441754,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.799739588268102,3.38123207019241,0.814605311381257,0.581857461502877,0.98190147846446,0.569128834118316,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0.972811360650212,0,0,0,0.624075346229121,0,0,0,0,0.568474235311454,0.651859905768103,1.35796068620151,1.40814148973101,0,0.952174563544055,1.17080188714679,0.945810864637146,0.8858587585951,0.956728611944923,0.81931657357869,0.690739927463582,0.723245292907558,0,0.54390568381871,0,0,1.60550589987792,1.28932855251423,0,0,0.315508219416257,0,1.07711698866399,0.716906393857656,0.445597348164788,0.566153061577665,0,0.292255857911312,0.790575555893047,1.92792789853084,0.851640511249612,1.06839362200353,0.81443479676788,0.329940245945071,0,0.485561272309963,1.209294227859,0.754420319023592,0.590603785761546,0.922305443831782,0,0.727067458955011,0.356497378384721,0,0,0,1.36175842301515,0.540183282093931,0.776152102696527,0.643011105094777,0.177340233642274,1.42695054081656,1.15184314421485,0.913394847343798,0.469343416127421,0,0.220528398054962,0.16488625294148,0.484393280087717,0.361877549568935,0.238744688006273,0.656563598980245,0,1.29797711407357,0.170870880797853,1.23832120777933,0.370389054739423,0,0,0,0,0,0.276399947608848,0,0.632671987162271,0.406638934253697,0.324016022465404,0.627264888043406,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,1.36115831840833,0.774958940866387,1.01373675294467,1.99507305697782,1.69265700297135,1.36317147753424,0.483168241652012,0.288030006257865,0,0.405450430580328,0.410843828659309,0.389762468933385,0.895133478337407,0.39736270956253,0.480781798079875,0.590758108698309,0.302899349844443,1.06689529317,0.806609481094724,0.38983152295901,0.384847366561318,0.467507608726276,0,0.221985953374065,0.269141569828427,1.00730769818447,0,0,0.36630324853453,0.428736758158132,0.501572104035363,3.3885110557024,4.14292712856459,4.01026859407578,5.15559547031063,4.11049511862385,1.5107877947794,1.35004500046361,1.80128481289688,0.453142408984205,4.14208249401456,0.93408612825759,0.798049746802062,0.512200817262403,0.972426868273176,0.628839487883947,1.2869045591501,1.77797382241292,0.618105171716683,1.28367683836726,0.505394423527595,1.2673964994512,1.32038438970253,0.936415074698824,0.448176066834085,0.689225627467359,1.42888107384922,1.15884325944855,0.77163688185482,1.64834360321323,0.883193520806384,1.02860775715625,1.06485483695602,0.715308569841963,1.88950341622027,0.846984423737976,0.846146078916765,0.914639864363863,1.31534855718921,0.543216455383447,0.561142271657738,0.830445126869219,1.0835493061312,1.63692417267876,1.23949472948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| |||
|short_description=p4@Lrrc16a | |||
}} |
Latest revision as of 07:31, 27 September 2015
Short description: | p4@Lrrc16a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lrrc16a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2832 |
Association with transcript: | -497bp_to_ENSMUST00000072889_5end |
EntrezGene: | Lrrc16a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.14e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-21 | 23 |
neuron | 1.13e-13 | 33 |
neuronal stem cell | 1.13e-13 | 33 |
neuroblast | 1.13e-13 | 33 |
electrically signaling cell | 1.13e-13 | 33 |
ectodermal cell | 2.22e-10 | 44 |
neurectodermal cell | 2.22e-10 | 44 |
electrically responsive cell | 2.43e-10 | 39 |
electrically active cell | 2.43e-10 | 39 |
neural cell | 9.72e-10 | 43 |
neuron of cerebral cortex | 1.84e-07 | 6 |