FFCP PHASE1:Hg19::chr3:32147997..32148009,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28956 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N335 | |||
|association_with_transcript=0bp_to_ENST00000282541,NM_015141_5end | |||
|cluster_id=chr3:32147997..32148009,+ | |||
|description=CAGE_peak_2_at_GPD1L_5end | |||
|id=chr3:32147997..32148009,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.69e-10!18;CL:0000789!3.69e-10!18;CL:0002420!3.69e-10!18;CL:0002419!3.69e-10!18;CL:0000790!3.69e-10!18;CL:0000625!3.95e-07!11;CL:0000838!5.92e-07!52;CL:0000542!7.26e-07!53;CL:0000051!7.26e-07!53;CL:0000084!7.90e-07!25;CL:0000827!7.90e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.35e-18;18!CL:0000789;7.35e-18;18!CL:0002419;7.35e-18;18!CL:0000084;5.09e-14;25!CL:0000625;3.09e-12;11!CL:0000542;3.97e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.83e-18,18;CL:0000789,6.83e-18,18;CL:0002420,6.83e-18,18;CL:0002419,6.83e-18,18;CL:0000790,6.83e-18,18;CL:0000084,9.91e-14,25;CL:0000827,9.91e-14,25;CL:0000625,3.78e-12,11;CL:0000838,3.05e-11,52;CL:0000542,7.23e-11,53;CL:0000051,7.23e-11,53 | |||
|ontology_enrichment_development_v019=CL:0000790;7.35e-18;18!UBERON:0006601;6.41e-08;82!CL:0000051;3.97e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.13e-32!115;UBERON:0000073!3.35e-25!94;UBERON:0001016!3.35e-25!94;UBERON:0001049!3.56e-25!57;UBERON:0005068!3.56e-25!57;UBERON:0006241!3.56e-25!57;UBERON:0007135!3.56e-25!57;UBERON:0005743!7.60e-25!86;UBERON:0001017!7.98e-25!82;UBERON:0002616!4.59e-22!59;UBERON:0000955!4.44e-21!69;UBERON:0006238!4.44e-21!69;UBERON:0003080!5.09e-20!42;UBERON:0002780!6.02e-20!41;UBERON:0001890!6.02e-20!41;UBERON:0006240!6.02e-20!41;UBERON:0002346!3.17e-19!90;UBERON:0001893!3.17e-19!34;UBERON:0002020!4.98e-19!34;UBERON:0003528!4.98e-19!34;UBERON:0001869!7.47e-19!32;UBERON:0003075!9.09e-19!86;UBERON:0007284!9.09e-19!86;UBERON:0002791!1.47e-18!33;UBERON:0002619!6.08e-16!22;UBERON:0001950!1.21e-14!20;UBERON:0000956!1.51e-14!25;UBERON:0000203!1.51e-14!25;UBERON:0003056!4.88e-13!61;UBERON:0000924!1.34e-12!173;UBERON:0006601!1.34e-12!173;UBERON:0004121!4.21e-12!169;UBERON:0000153!6.13e-11!129;UBERON:0007811!6.13e-11!129;UBERON:0000033!9.38e-10!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.45e-29;32!UBERON:0002619;3.44e-29;22!UBERON:0001893;3.11e-28;34!UBERON:0003528;9.46e-28;34!UBERON:0002020;9.46e-28;34!UBERON:0002791;1.46e-27;32!UBERON:0001950;1.04e-26;20!UBERON:0000956;9.62e-25;25!UBERON:0000203;9.62e-25;25!UBERON:0002780;1.28e-23;41!UBERON:0001890;1.28e-23;41!UBERON:0000073;1.39e-20;53!UBERON:0002616;1.39e-20;53!UBERON:0001017;1.00e-15;75!UBERON:0000955;1.03e-14;68!UBERON:0001016;7.89e-14;83!UBERON:0007023;4.88e-10;114!UBERON:0001871;1.57e-09;6!UBERON:0002420;2.03e-09;9!UBERON:0007245;2.03e-09;9!UBERON:0010009;2.03e-09;9!UBERON:0010011;2.03e-09;9!UBERON:0000454;2.03e-09;9!UBERON:0000200;6.29e-09;6!UBERON:0000125;9.39e-09;9!UBERON:0002308;9.39e-09;9!UBERON:0002021;7.74e-08;5!UBERON:0001872;1.11e-07;5!UBERON:0000349;1.18e-07;5!UBERON:0009663;4.03e-07;7!UBERON:0004732;4.78e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.59e-41,56;UBERON:0005068,7.59e-41,56;UBERON:0006241,7.59e-41,56;UBERON:0007135,7.59e-41,56;UBERON:0000073,5.95e-38,53;UBERON:0002616,5.95e-38,53;UBERON:0001017,3.42e-35,81;UBERON:0001016,1.24e-33,89;UBERON:0007023,2.03e-33,114;UBERON:0001869,1.14e-32,32;UBERON:0002780,1.21e-32,41;UBERON:0001890,1.21e-32,41;UBERON:0003080,1.21e-32,41;UBERON:0006240,1.21e-32,41;UBERON:0001893,2.50e-32,34;UBERON:0003528,5.69e-32,34;UBERON:0002020,5.69e-32,34;UBERON:0000955,9.77e-32,68;UBERON:0006238,9.77e-32,68;UBERON:0002791,4.29e-30,32;UBERON:0002346,7.19e-30,86;UBERON:0003075,1.33e-29,82;UBERON:0007284,1.33e-29,82;UBERON:0002619,6.57e-29,22;UBERON:0001950,1.97e-26,20;UBERON:0000956,1.67e-24,25;UBERON:0000203,1.67e-24,25;UBERON:0003056,1.80e-22,61;UBERON:0010371,1.84e-21,104;UBERON:0010314,2.48e-15,132;UBERON:0004121,3.31e-15,171;UBERON:0000924,3.31e-15,171;UBERON:0006601,3.31e-15,171;UBERON:0001871,2.09e-09,6;UBERON:0003076,2.43e-09,15;UBERON:0003057,2.43e-09,15;UBERON:0002420,2.47e-09,9;UBERON:0007245,2.47e-09,9;UBERON:0010009,2.47e-09,9;UBERON:0010011,2.47e-09,9;UBERON:0000454,2.47e-09,9;UBERON:0000200,6.50e-09,6;UBERON:0000125,7.38e-09,9;UBERON:0002308,7.38e-09,9;UBERON:0011216,2.96e-08,223;UBERON:0002021,9.17e-08,5;UBERON:0001872,1.18e-07,5;UBERON:0000349,1.21e-07,5;UBERON:0004732,1.88e-07,13;UBERON:0002298,4.03e-07,6;UBERON:0009663,4.76e-07,7;UBERON:0004733,8.89e-07,12;UBERON:0002028,8.89e-07,12;UBERON:0007277,8.89e-07,12 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,1.78784437770915,0,0,0.631719873426831,1.30592814099919,0,0,0,0.527533956456907,0.618831764800233,0,0,0,1.46062018077475,0.487932798790507,0.246242116153576,0.408001382488506,0.626909442956176,0.85870796139317,0.136874425072884,0.376627918784408,0.382067028739756,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0.739508020333575,0.774672005803016,0.284338464974843,1.76160263600908,1.10799081706375,0.200544447470142,0.217010870715852,0.671746422719773,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,1.29096936716765,0,0,0,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0.425208599930087,0.628975936525128,0.44931452458598,0.600707571366025,0.48217676009124,0.285012743741249,0.79566670879636,0.182664153764634,1.75996244461323,3.27683166757279,2.66852776159066,0,0,1.14950487990897,2.64417949113945,1.90810750907073,1.1384259382189,0.587237189370939,1.14681968437569,0,1.12101712596307,0.526768169550154,2.9506465517075,3.93010762749165,1.02800749499755,1.83905144929746,2.60737813306872,1.89379122293893,0,1.00269411196656,1.17842362989935,1.10766947291811,0.270803863765016,1.28091319725675,1.56071217071854,2.13769275984779,1.38175008892924,1.44901542867526,1.33457906845854,2.67540828089713,0,2.15287751125376,1.91610246800961,1.03088233644789,1.77113784413652,3.50421955756506,1.30216690771284,6.65316431113862,2.40920190524436,2.55973222308837,7.49584359314075,3.78843603270427,4.92676798152628,1.41124720257313,1.33720097891754,2.17236605824198,0,0,0.511450247374121,0.722878304769133,0.50133791063589,0.289693037921647,0.795285947051099,0,0.378139268656271,1.33037638477538,0.351339142772504,1.76821751921912,0,0,0,0.348259474598534,0.132957960518865,3.33886874027479,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0.44905874525234,0.112611480483322,1.53316637465883,0,0.732806975721629,2.63560834872127,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0.454072282934794,1.15235184896,0.70296429550139,0,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.619954687054593,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0.612975591598039,0.45071417671979,0.453728732640084,0,0,0.423863802319124,0,0.309157587715317,0.257640540045629,0.558350568994769,0.168776332241266,0.194874010322397,0.504867548488229,0.276149695926898,0.646584227275248,0.710019185033229,0.302256294682921,0.508681776931463,0.193260853163297,0.545492241181669,0,0.121973706129595,0.132529768321485,0.348581828608555,0,0,0.36497735907583,1.56449532329816,0,0,0,1.44375896333917,0,0.168584690078102,0.723033089650446,0.882351781859152,0,0.237270619111097,0.404493924480493,0.392442930250692,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0.245976877086227,0.343135620597051,0.219500570817251,0,0.201057944823262,0,0,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0,0,0,0.246217006087397,0,0.445893486866185,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.088048434013226,0.207328115540772,0,0.50496973370552,0.317489471460845,0.381988425558278,1.17217447210047,0,0.102827492703324,0.901029173531752,0,0.448524337381443,0.43596006883328,0.36669142910475,0.258543431515556,0,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0.57191197463259,0,0,0.65147236858747,0.710783897485092,0.791951872933429,0.301439377059586,1.74306691720059,0.599837947092342,2.43247561282381,0,0,0,0,0,0.434343920002738,0,0.895304816199478,1.68127715990291,1.18218456121156,1.50939302401662,0.898401253958239,1.01637849688985,2.60279707715243,0.773288812777695,4.35542289869307,1.27587750330633,0.749007023947182,2.99161459204025,0.828831026872071,0.613457458595699,0.500170521059677,1.35632511849868,0.415941723061614,0,0.473107245101804,0.468565659970853,0.601892199455438,0,0,1.32845119707087,0.553107505625109,0,0,0,0.413536052245775,1.72571360654893,0.533637789017222,0,0,0,0.248107807818777,0.767309866440312,0.841980283299221,0.768834895534206,0,0.64341568457443,1.48418066444991,0.308419387605311,0.355123450626254,0.410635780069046,0,0.348631135379878,0,0.200506470303285,0.460404944679482,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0.769350375349168,0,0.976135183992909,0.412164046590889,0.183138929636687,0.247528499761764,0,0.650060246036521,0,0.386682873168488,0.616194468458578,0.460511024178389,0.551346289938122,0.537101224341368,0.725083469571143,0.511359764496605,0.62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| |||
|short_description=p2@GPD1L | |||
}} |
Latest revision as of 22:59, 17 September 2015
Short description: | p2@GPD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPD1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282541, NM_015141_5end |
EntrezGene: | GPD1L |
HGNC: | 28956 |
UniProt: | Q8N335 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.83e-18 | 18 |
alpha-beta T cell | 6.83e-18 | 18 |
immature T cell | 6.83e-18 | 18 |
mature T cell | 6.83e-18 | 18 |
immature alpha-beta T cell | 6.83e-18 | 18 |
T cell | 9.91e-14 | 25 |
pro-T cell | 9.91e-14 | 25 |
CD8-positive, alpha-beta T cell | 3.78e-12 | 11 |
lymphoid lineage restricted progenitor cell | 3.05e-11 | 52 |
lymphocyte | 7.23e-11 | 53 |
common lymphoid progenitor | 7.23e-11 | 53 |