FFCP PHASE1:Mm9::chr12:85489399..85489449,-: Difference between revisions
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{{FFCP|EntrezGene=70481|HGNC=|MCL_coexpression_id=0|UniProt=Q8C1C8|association_with_transcript=0bp_to_ENSMUST00000061425,NM_027438,uc007oel.1_5end|description=CAGE_peak_1_at_Pnma1_5end|id=chr12:85489399..85489449,-|ontology_enrichment_celltype=CL:0000117!6.61e-16!23;CL:0000337!6.61e-16!23;CL:0000540!3.55e-11!33;CL:0000047!3.55e-11!33;CL:0000031!3.55e-11!33;CL:0000404!3.55e-11!33;CL:0000221!2.52e-10!44;CL:0000133!2.52e-10!44;CL:0002319!2.82e-10!43;CL:0000393!1.64e-08!39;CL:0000211!1.64e-08!39;CL:0000055!8.93e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.23e-23,23;CL:0000337,7.23e-23,23;CL:0000540,1.20e-14,33;CL:0000047,1.20e-14,33;CL:0000031,1.20e-14,33;CL:0000404,1.20e-14,33;CL:0000393,9.40e-12,39;CL:0000211,9.40e-12,39;CL:0002319,1.19e-11,43;CL:0000221,2.75e-11,44;CL:0000133,2.75e-11,44;CL:0002613,6.72e-08,3;CL:0000120,1.43e-07,3;CL:0002608,7.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.33e-24!73;UBERON:0005743!2.33e-24!73;UBERON:0000073!5.17e-23!75;UBERON:0001016!5.17e-23!75;UBERON:0003056!4.26e-22!49;UBERON:0001049!1.58e-21!52;UBERON:0005068!1.58e-21!52;UBERON:0006241!1.58e-21!52;UBERON:0007135!1.58e-21!52;UBERON:0000033!4.20e-21!63;UBERON:0002020!5.98e-21!34;UBERON:0002346!1.02e-20!71;UBERON:0003075!1.02e-20!71;UBERON:0007284!1.02e-20!71;UBERON:0000955!4.44e-20!50;UBERON:0006238!4.44e-20!50;UBERON:0003080!5.68e-20!40;UBERON:0002780!1.67e-19!39;UBERON:0001890!1.67e-19!39;UBERON:0006240!1.67e-19!39;UBERON:0002616!1.70e-19!49;UBERON:0004121!3.10e-18!102;UBERON:0000924!3.10e-18!102;UBERON:0006601!3.10e-18!102;UBERON:0002791!1.22e-17!29;UBERON:0003528!1.22e-17!29;UBERON:0001893!1.22e-17!29;UBERON:0000956!3.37e-12!21;UBERON:0001869!3.37e-12!21;UBERON:0000203!3.37e-12!21;UBERON:0007811!5.79e-11!86;UBERON:0002619!7.40e-10!17;UBERON:0000153!7.15e-09!94;UBERON:0002021!8.12e-09!10;UBERON:0000411!8.12e-09!10;UBERON:0001950!8.12e-09!10;UBERON:0000025!2.25e-08!114;UBERON:0004111!3.50e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.54e-37,34;UBERON:0003528,1.29e-31,29;UBERON:0002791,1.29e-31,29;UBERON:0001893,1.29e-31,29;UBERON:0003056,1.15e-29,49;UBERON:0002780,1.19e-28,39;UBERON:0001890,1.19e-28,39;UBERON:0006240,1.19e-28,39;UBERON:0000073,2.16e-28,54;UBERON:0002346,2.26e-28,64;UBERON:0003075,2.26e-28,64;UBERON:0007284,2.26e-28,64;UBERON:0003080,8.96e-28,40;UBERON:0001049,1.00e-27,52;UBERON:0005068,1.00e-27,52;UBERON:0006241,1.00e-27,52;UBERON:0007135,1.00e-27,52;UBERON:0001017,3.23e-26,73;UBERON:0001016,2.64e-25,75;UBERON:0004121,5.46e-24,95;UBERON:0000924,5.46e-24,95;UBERON:0006601,5.46e-24,95;UBERON:0010371,6.56e-24,73;UBERON:0002616,2.55e-23,46;UBERON:0000956,7.31e-23,21;UBERON:0001869,7.31e-23,21;UBERON:0000203,7.31e-23,21;UBERON:0000955,1.09e-22,47;UBERON:0006238,1.09e-22,47;UBERON:0002619,3.97e-22,17;UBERON:0002021,2.91e-20,10;UBERON:0000411,2.91e-20,10;UBERON:0001950,2.91e-20,10;UBERON:0010314,2.32e-17,92;UBERON:0002420,1.14e-09,8;UBERON:0007245,1.14e-09,8;UBERON:0010009,1.14e-09,8;UBERON:0010011,1.14e-09,8;UBERON:0000454,1.14e-09,8;UBERON:0000025,7.83e-09,114;UBERON:0004111,8.21e-08,122;UBERON:0000369,1.07e-07,5;UBERON:0002435,1.07e-07,5;UBERON:0000204,1.07e-07,5;UBERON:0010082,1.07e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,3.23706337375356,4.23192783417626,3.80298842103708,0,0,0,0,0,0.898800331555214,0.384218305321555,0.725827286159344,1.62007125998029,0.841299845405528,1.14260393761521,1.98781686856452,1.5923803897944,1.53352753629178,3.67687514644008,1.10115880999389,0.255374676170375,0.768032666281217,5.67111037239834,4.48289453651807,5.73004707612436,0.558365998002762,2.25105044012672,2.29197371665215,1.47314292736834,1.85083185038834,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.599162557619291,0.457500602818626,2.26177833803156,2.9550134432687,0.767146371990992,1.0389402227978,1.1356888414743,0.101839363850316,0.124406970610093,0,0,0.520481771850815,1.37941262660084,1.80062129805349,0.60281927134286,1.2246569847239,1.2811372028485,0.374806898238915,0,0,0.189106080167819,0,0,0,0,0,0,0,0.51469581422943,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0,0,0.841159794256509,3.60166143327496,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.335012514883631,0.714130922658041,0.390267295715598,0.157635144106191,0,0.637819074629948,0.81931657357869,0.34536996373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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70481 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C1C8 | |||
|association_with_transcript=0bp_to_ENSMUST00000061425,NM_027438,uc007oel.1_5end | |||
|cluster_id=chr12:85489399..85489449,- | |||
|description=CAGE_peak_1_at_Pnma1_5end | |||
|id=chr12:85489399..85489449,- | |||
|ontology_enrichment_celltype=CL:0000117!6.61e-16!23;CL:0000337!6.61e-16!23;CL:0000540!3.55e-11!33;CL:0000047!3.55e-11!33;CL:0000031!3.55e-11!33;CL:0000404!3.55e-11!33;CL:0000221!2.52e-10!44;CL:0000133!2.52e-10!44;CL:0002319!2.82e-10!43;CL:0000393!1.64e-08!39;CL:0000211!1.64e-08!39;CL:0000055!8.93e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.23e-23,23;CL:0000337,7.23e-23,23;CL:0000540,1.20e-14,33;CL:0000047,1.20e-14,33;CL:0000031,1.20e-14,33;CL:0000404,1.20e-14,33;CL:0000393,9.40e-12,39;CL:0000211,9.40e-12,39;CL:0002319,1.19e-11,43;CL:0000221,2.75e-11,44;CL:0000133,2.75e-11,44;CL:0002613,6.72e-08,3;CL:0000120,1.43e-07,3;CL:0002608,7.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.33e-24!73;UBERON:0005743!2.33e-24!73;UBERON:0000073!5.17e-23!75;UBERON:0001016!5.17e-23!75;UBERON:0003056!4.26e-22!49;UBERON:0001049!1.58e-21!52;UBERON:0005068!1.58e-21!52;UBERON:0006241!1.58e-21!52;UBERON:0007135!1.58e-21!52;UBERON:0000033!4.20e-21!63;UBERON:0002020!5.98e-21!34;UBERON:0002346!1.02e-20!71;UBERON:0003075!1.02e-20!71;UBERON:0007284!1.02e-20!71;UBERON:0000955!4.44e-20!50;UBERON:0006238!4.44e-20!50;UBERON:0003080!5.68e-20!40;UBERON:0002780!1.67e-19!39;UBERON:0001890!1.67e-19!39;UBERON:0006240!1.67e-19!39;UBERON:0002616!1.70e-19!49;UBERON:0004121!3.10e-18!102;UBERON:0000924!3.10e-18!102;UBERON:0006601!3.10e-18!102;UBERON:0002791!1.22e-17!29;UBERON:0003528!1.22e-17!29;UBERON:0001893!1.22e-17!29;UBERON:0000956!3.37e-12!21;UBERON:0001869!3.37e-12!21;UBERON:0000203!3.37e-12!21;UBERON:0007811!5.79e-11!86;UBERON:0002619!7.40e-10!17;UBERON:0000153!7.15e-09!94;UBERON:0002021!8.12e-09!10;UBERON:0000411!8.12e-09!10;UBERON:0001950!8.12e-09!10;UBERON:0000025!2.25e-08!114;UBERON:0004111!3.50e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.54e-37,34;UBERON:0003528,1.29e-31,29;UBERON:0002791,1.29e-31,29;UBERON:0001893,1.29e-31,29;UBERON:0003056,1.15e-29,49;UBERON:0002780,1.19e-28,39;UBERON:0001890,1.19e-28,39;UBERON:0006240,1.19e-28,39;UBERON:0000073,2.16e-28,54;UBERON:0002346,2.26e-28,64;UBERON:0003075,2.26e-28,64;UBERON:0007284,2.26e-28,64;UBERON:0003080,8.96e-28,40;UBERON:0001049,1.00e-27,52;UBERON:0005068,1.00e-27,52;UBERON:0006241,1.00e-27,52;UBERON:0007135,1.00e-27,52;UBERON:0001017,3.23e-26,73;UBERON:0001016,2.64e-25,75;UBERON:0004121,5.46e-24,95;UBERON:0000924,5.46e-24,95;UBERON:0006601,5.46e-24,95;UBERON:0010371,6.56e-24,73;UBERON:0002616,2.55e-23,46;UBERON:0000956,7.31e-23,21;UBERON:0001869,7.31e-23,21;UBERON:0000203,7.31e-23,21;UBERON:0000955,1.09e-22,47;UBERON:0006238,1.09e-22,47;UBERON:0002619,3.97e-22,17;UBERON:0002021,2.91e-20,10;UBERON:0000411,2.91e-20,10;UBERON:0001950,2.91e-20,10;UBERON:0010314,2.32e-17,92;UBERON:0002420,1.14e-09,8;UBERON:0007245,1.14e-09,8;UBERON:0010009,1.14e-09,8;UBERON:0010011,1.14e-09,8;UBERON:0000454,1.14e-09,8;UBERON:0000025,7.83e-09,114;UBERON:0004111,8.21e-08,122;UBERON:0000369,1.07e-07,5;UBERON:0002435,1.07e-07,5;UBERON:0000204,1.07e-07,5;UBERON:0010082,1.07e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0.42438965179803,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,3.23706337375356,4.23192783417626,3.80298842103708,0,0,0,0,0,0.898800331555214,0.384218305321555,0.725827286159344,1.62007125998029,0.841299845405528,1.14260393761521,1.98781686856452,1.5923803897944,1.53352753629178,3.67687514644008,1.10115880999389,0.255374676170375,0.768032666281217,5.67111037239834,4.48289453651807,5.73004707612436,0.558365998002762,2.25105044012672,2.29197371665215,1.47314292736834,1.85083185038834,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.599162557619291,0.457500602818626,2.26177833803156,2.9550134432687,0.767146371990992,1.0389402227978,1.1356888414743,0.101839363850316,0.124406970610093,0,0,0.520481771850815,1.37941262660084,1.80062129805349,0.60281927134286,1.2246569847239,1.2811372028485,0.374806898238915,0,0,0.189106080167819,0,0,0,0,0,0,0,0.51469581422943,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0,0,0.841159794256509,3.60166143327496,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0.335012514883631,0.714130922658041,0.390267295715598,0.157635144106191,0,0.637819074629948,0.81931657357869,0.345369963731791,0.867894351489069,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,1.03135543248187,0,0.900305470156551,0.388076051348264,0.214337035031592,0,0.535106452806212,0.987294123612726,1.522324745573,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0.129614973291793,0,54.1145221136823,0,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,20.5346502702105,27.938910607013,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.194915761479505,0,0,0,0.221985953374065,0.269141569828427,0,0,0,0,0,0,5.64751842617067,1.38097570952153,6.30185064783336,2.92150409984269,4.11049511862385,1.5107877947794,2.70009000092722,2.70192721934532,3.17199686288943,3.10656187051092,0.31136204275253,0,0.170733605754134,0.729320151204882,0.209613162627982,1.2869045591501,0.44449345560323,0.412070114477788,0,0,0,0.188626341386076,0.37456602987953,0.384150914429216,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,0,0.711810108745045,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |||
|short_description=p1@Pnma1 | |||
}} |
Latest revision as of 22:08, 26 September 2015
Short description: | p1@Pnma1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pnma1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000061425, NM_027438, uc007oel.1_5end |
EntrezGene: | Pnma1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.23e-23 | 23 |
neuroblast (sensu Vertebrata) | 7.23e-23 | 23 |
neuron | 1.20e-14 | 33 |
neuronal stem cell | 1.20e-14 | 33 |
neuroblast | 1.20e-14 | 33 |
electrically signaling cell | 1.20e-14 | 33 |
electrically responsive cell | 9.40e-12 | 39 |
electrically active cell | 9.40e-12 | 39 |
neural cell | 1.19e-11 | 43 |
ectodermal cell | 2.75e-11 | 44 |
neurectodermal cell | 2.75e-11 | 44 |
striatum neuron | 6.72e-08 | 3 |
granule cell | 1.43e-07 | 3 |
hippocampal neuron | 7.77e-07 | 3 |