FFCP PHASE1:Hg19::chr3:186435171..186435182,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6383 | |||
|TSSclassifier=strong | |||
|UniProt=B4DPP8 | |||
|association_with_transcript=23bp_to_ENST00000432028_5end | |||
|cluster_id=chr3:186435171..186435182,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_KNG1_5end | |||
|id=chr3:186435171..186435182,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.07e-23!12;CL:0000417!1.07e-23!12;CL:0000668!1.07e-23!12;CL:0000414!1.07e-23!12;CL:0000412!1.07e-23!12;CL:0000182!1.07e-23!12;CL:0002563!1.62e-18!4;CL:0002253!9.68e-17!2;CL:0000223!5.59e-12!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.97e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.97e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.77e-08;31!UBERON:0003918;5.11e-07;10!UBERON:0007687;5.11e-07;10 | |||
|ontology_enrichment_disease=DOID:178!4.15e-09!1;DOID:326!4.15e-09!1;DOID:3978!4.15e-09!1;DOID:3394!4.15e-09!1;DOID:5844!4.15e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.04e-26!19;UBERON:0006925!3.04e-26!19;UBERON:0008836!3.04e-26!19;UBERON:0005057!7.29e-24!26;UBERON:0008835!1.57e-22!22;UBERON:0003894!1.57e-22!22;UBERON:0009854!1.66e-21!23;UBERON:0007499!1.05e-19!25;UBERON:0009497!1.05e-19!25;UBERON:0000015!1.05e-19!25;UBERON:0002423!1.05e-19!25;UBERON:0006235!1.05e-19!25;UBERON:0004161!1.05e-19!25;UBERON:0003929!2.21e-19!54;UBERON:0009856!6.61e-19!26;UBERON:0001242!1.62e-18!4;UBERON:0001262!1.62e-18!4;UBERON:0004786!1.62e-18!4;UBERON:0004808!1.62e-18!4;UBERON:0001277!1.62e-18!4;UBERON:0001052!2.47e-18!4;UBERON:0005172!5.69e-16!55;UBERON:0005173!5.69e-16!55;UBERON:0002365!1.09e-15!31;UBERON:0002330!1.09e-15!31;UBERON:0003350!6.20e-15!5;UBERON:0004907!8.66e-15!5;UBERON:0002417!3.22e-14!61;UBERON:0000916!3.22e-14!61;UBERON:0002368!8.92e-14!35;UBERON:0005911!4.67e-12!82;UBERON:0004921!3.64e-11!129;UBERON:0004185!3.64e-11!129;UBERON:0000949!1.77e-10!45;UBERON:0002530!8.83e-10!59;UBERON:0002146!3.25e-09!1;UBERON:0005623!3.25e-09!1;UBERON:0001007!7.49e-09!155;UBERON:0001555!7.49e-09!155;UBERON:0007026!7.49e-09!155;UBERON:0000485!1.57e-08!9;UBERON:0000077!3.91e-08!130;UBERON:0004119!6.70e-08!169;UBERON:0000925!6.70e-08!169;UBERON:0006595!6.70e-08!169;UBERON:0005409!1.80e-07!35;UBERON:0005177!2.58e-07!107;UBERON:0000059!5.34e-07!11;UBERON:0000160!6.28e-07!27;UBERON:0001046!7.34e-07!19;UBERON:0009569!7.88e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.24e-20;19!UBERON:0006925;2.24e-20;19!UBERON:0002423;1.65e-15;25!UBERON:0002365;1.69e-12;31!UBERON:0002330;1.69e-12;31!UBERON:0002368;7.68e-11;33!UBERON:0005172;1.84e-10;52!UBERON:0005173;1.84e-10;52!UBERON:0000949;5.86e-08;43!UBERON:0002417;3.24e-07;58!UBERON:0000916;3.24e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.24e-20,19;UBERON:0006925,2.24e-20,19;UBERON:0008836,2.24e-20,19;UBERON:0008835,1.30e-17,22;UBERON:0003894,1.30e-17,22;UBERON:0009854,7.50e-17,23;UBERON:0007499,1.65e-15,25;UBERON:0009497,1.65e-15,25;UBERON:0000015,1.65e-15,25;UBERON:0002423,1.65e-15,25;UBERON:0006235,1.65e-15,25;UBERON:0004161,1.65e-15,25;UBERON:0009856,6.48e-15,26;UBERON:0005172,1.58e-13,54;UBERON:0005173,1.58e-13,54;UBERON:0003929,1.77e-13,54;UBERON:0002365,1.62e-12,31;UBERON:0002330,1.62e-12,31;UBERON:0002417,3.93e-12,60;UBERON:0000916,3.93e-12,60;UBERON:0002368,4.35e-11,35;UBERON:0002530,3.70e-09,59;UBERON:0005911,1.03e-08,82;UBERON:0000949,1.28e-08,45;UBERON:0005177,5.29e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,268.720673822281,140.544291984901,114.613241896192,0,6.64137568132813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02148623979056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,238.333859941182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,240.819842387001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0.404421263125109,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,10.8751876072893,8.70746163040969,0,0,0,0,0,0,0,0,0,0,0,0,0,263.64746838687,62.278237788744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.966868319603658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@KNG1 | |||
}} |
Latest revision as of 05:20, 17 September 2015
Short description: | p4@KNG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KNG1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 23bp_to_ENST00000432028_5end |
EntrezGene: | KNG1 |
HGNC: | 6383 |
UniProt: | B4DPP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.97e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.24e-20 | 19 |
digestive gland | 2.24e-20 | 19 |
liver bud | 2.24e-20 | 19 |
hepatic diverticulum | 1.30e-17 | 22 |
liver primordium | 1.30e-17 | 22 |
digestive tract diverticulum | 7.50e-17 | 23 |
epithelial sac | 1.65e-15 | 25 |
epithelium of foregut-midgut junction | 1.65e-15 | 25 |
anatomical boundary | 1.65e-15 | 25 |
hepatobiliary system | 1.65e-15 | 25 |
foregut-midgut junction | 1.65e-15 | 25 |
septum transversum | 1.65e-15 | 25 |
sac | 6.48e-15 | 26 |
abdomen element | 1.58e-13 | 54 |
abdominal segment element | 1.58e-13 | 54 |
gut epithelium | 1.77e-13 | 54 |
exocrine gland | 1.62e-12 | 31 |
exocrine system | 1.62e-12 | 31 |
abdominal segment of trunk | 3.93e-12 | 60 |
abdomen | 3.93e-12 | 60 |
endocrine gland | 4.35e-11 | 35 |
gland | 3.70e-09 | 59 |
endo-epithelium | 1.03e-08 | 82 |
endocrine system | 1.28e-08 | 45 |
trunk region element | 5.29e-07 | 101 |