FFCP PHASE1:Hg19::chr3:148939598..148939622,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1356 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2295 | |||
|TSSclassifier=strong | |||
|UniProt=D6RE86,E9PFZ2 | |||
|association_with_transcript=0bp_to_ENST00000455472,ENST00000481169,ENST00000490639_5end | |||
|cluster_id=chr3:148939598..148939622,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CP_5end | |||
|id=chr3:148939598..148939622,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.67e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.67e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.39e-11;82!UBERON:0003104;1.57e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.91e-60!115;UBERON:0003075!5.31e-31!86;UBERON:0007284!5.31e-31!86;UBERON:0001049!7.62e-31!57;UBERON:0005068!7.62e-31!57;UBERON:0006241!7.62e-31!57;UBERON:0007135!7.62e-31!57;UBERON:0002346!1.73e-28!90;UBERON:0005743!1.70e-26!86;UBERON:0001017!2.56e-26!82;UBERON:0002616!7.83e-26!59;UBERON:0000955!2.58e-23!69;UBERON:0006238!2.58e-23!69;UBERON:0000073!5.26e-23!94;UBERON:0001016!5.26e-23!94;UBERON:0003080!4.18e-22!42;UBERON:0002780!2.33e-21!41;UBERON:0001890!2.33e-21!41;UBERON:0006240!2.33e-21!41;UBERON:0000153!4.86e-21!129;UBERON:0007811!4.86e-21!129;UBERON:0003056!3.40e-20!61;UBERON:0000033!4.36e-20!123;UBERON:0004121!4.30e-17!169;UBERON:0000477!6.34e-17!286;UBERON:0004111!1.28e-16!241;UBERON:0002020!1.88e-16!34;UBERON:0003528!1.88e-16!34;UBERON:0001893!4.12e-16!34;UBERON:0000924!4.63e-16!173;UBERON:0006601!4.63e-16!173;UBERON:0002791!1.06e-15!33;UBERON:0000025!4.09e-15!194;UBERON:0001869!1.50e-14!32;UBERON:0000475!4.71e-14!365;UBERON:0000481!9.61e-14!347;UBERON:0000062!1.39e-13!511;UBERON:0000956!4.19e-10!25;UBERON:0000203!4.19e-10!25;UBERON:0003076!7.62e-10!15;UBERON:0003057!7.62e-10!15;UBERON:0000468!8.40e-10!659;UBERON:0000467!2.93e-09!625;UBERON:0000480!3.72e-09!626;UBERON:0000483!6.03e-09!309;UBERON:0002619!8.15e-09!22;UBERON:0004732!1.03e-08!13;UBERON:0000119!1.41e-08!312;UBERON:0000922!1.91e-08!612;UBERON:0002308!1.96e-08!9;UBERON:0000125!1.96e-08!9;UBERON:0002298!5.26e-08!8;UBERON:0002050!5.71e-08!605;UBERON:0005423!5.71e-08!605;UBERON:0004733!7.33e-08!12;UBERON:0002028!7.33e-08!12;UBERON:0007277!7.33e-08!12;UBERON:0009856!7.34e-08!26;UBERON:0004921!8.39e-08!129;UBERON:0004185!8.39e-08!129;UBERON:0000923!1.11e-07!604;UBERON:0005291!1.11e-07!604;UBERON:0006598!1.11e-07!604;UBERON:0002532!1.11e-07!604;UBERON:0009854!1.46e-07!23;UBERON:0002368!1.52e-07!35;UBERON:0000064!1.67e-07!219;UBERON:0001950!1.76e-07!20;UBERON:0000949!1.79e-07!45;UBERON:0007499!2.24e-07!25;UBERON:0001041!4.29e-07!98;UBERON:0008835!4.53e-07!22;UBERON:0003894!4.53e-07!22;UBERON:0005057!4.69e-07!26;UBERON:0001894!5.06e-07!7;UBERON:0006222!5.06e-07!7;UBERON:0009663!7.74e-07!7;UBERON:0002107!8.51e-07!19;UBERON:0006925!8.51e-07!19;UBERON:0008836!8.51e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.11e-17;53!UBERON:0002616;1.11e-17;53!UBERON:0007023;2.93e-17;114!UBERON:0002780;8.51e-15;41!UBERON:0001890;8.51e-15;41!UBERON:0001893;7.19e-12;34!UBERON:0003528;8.28e-12;34!UBERON:0002020;8.28e-12;34!UBERON:0004732;2.32e-11;13!UBERON:0002791;5.88e-11;32!UBERON:0000125;6.87e-11;9!UBERON:0002308;6.87e-11;9!UBERON:0000955;8.80e-11;68!UBERON:0001869;2.02e-10;32!UBERON:0004733;3.34e-10;12!UBERON:0002028;3.34e-10;12!UBERON:0001017;1.67e-09;75!UBERON:0001894;5.83e-09;7!UBERON:0009663;9.91e-09;7!UBERON:0002420;1.40e-08;9!UBERON:0007245;1.40e-08;9!UBERON:0010009;1.40e-08;9!UBERON:0010011;1.40e-08;9!UBERON:0000454;1.40e-08;9!UBERON:0001016;4.13e-08;83!UBERON:0002298;4.28e-08;6!UBERON:0002680;8.90e-07;9!UBERON:0001895;8.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.62e-68,114;UBERON:0003075,3.83e-31,82;UBERON:0007284,3.83e-31,82;UBERON:0001049,4.59e-30,56;UBERON:0005068,4.59e-30,56;UBERON:0006241,4.59e-30,56;UBERON:0007135,4.59e-30,56;UBERON:0002346,7.32e-29,86;UBERON:0000073,1.27e-28,53;UBERON:0002616,1.27e-28,53;UBERON:0001017,2.18e-25,81;UBERON:0000955,9.33e-23,68;UBERON:0006238,9.33e-23,68;UBERON:0011216,1.06e-22,223;UBERON:0001016,1.39e-22,89;UBERON:0010371,7.71e-22,104;UBERON:0003056,1.86e-20,61;UBERON:0002780,7.67e-20,41;UBERON:0001890,7.67e-20,41;UBERON:0003080,7.67e-20,41;UBERON:0006240,7.67e-20,41;UBERON:0010314,1.06e-18,132;UBERON:0004121,1.64e-16,171;UBERON:0000924,1.64e-16,171;UBERON:0006601,1.64e-16,171;UBERON:0003528,8.00e-14,34;UBERON:0002020,8.00e-14,34;UBERON:0000025,1.14e-13,192;UBERON:0001893,1.84e-13,34;UBERON:0004111,3.00e-13,240;UBERON:0002791,4.71e-12,32;UBERON:0001869,1.22e-11,32;UBERON:0003076,1.41e-11,15;UBERON:0003057,1.41e-11,15;UBERON:0004732,1.73e-11,13;UBERON:0000125,6.71e-11,9;UBERON:0002308,6.71e-11,9;UBERON:0004733,2.50e-10,12;UBERON:0002028,2.50e-10,12;UBERON:0007277,2.50e-10,12;UBERON:0001894,5.49e-09,7;UBERON:0006222,5.49e-09,7;UBERON:0009663,9.74e-09,7;UBERON:0002420,1.41e-08,9;UBERON:0007245,1.41e-08,9;UBERON:0010009,1.41e-08,9;UBERON:0010011,1.41e-08,9;UBERON:0000454,1.41e-08,9;UBERON:0002298,4.29e-08,6;UBERON:0000483,8.77e-08,306;UBERON:0000119,1.62e-07,309;UBERON:0000922,5.03e-07,592;UBERON:0009854,5.40e-07,23;UBERON:0005423,6.51e-07,581;UBERON:0002680,6.90e-07,9;UBERON:0001895,6.90e-07,9;UBERON:0010092,6.90e-07,9;UBERON:0009856,7.68e-07,26 | |||
|phase1_expression=1.2717486548939,1.92690471501885,1.83240725324762,0,0.446961094427288,0.872338524100369,0,0,2.35067065379855,0.245733936501509,0,0,0,0,0,0,0,0,0,1.96993692922861,0,1.56727360739044,4.57977579409691,0.410623275218653,1.38096903554283,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.502497330513487,0,0.868755378820466,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.53007406669196,4.01070328508712,7.09747942908036,0,4.86634870302636,13.0458047686414,2.88248216701333,1.05401742831751,3.66741411393595,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0,0.340296549480063,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,2114.27398082814,1477.18930666647,2240.27532613588,0,0,14.0685604444791,0,0,0,0,0,0,1.44331342025273,66.428122050719,0.117408694235822,0.144366447761074,0,1.14152491340759,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,3.86644406388848,0.837581326671744,1.91381625495949,0,0,0,1.10422342547226,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27764876265012,518.708452634634,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0,0.708104465988849,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,5.97095077717098,2.19225442626881,0,0,0,0.30982349809975,0,0,0,0,0,0.844430541190656,1.97576935775941,0,0,0,0,0,561.661915434264,0,0,0,0,0,0,0,0,0,0,0,0,22.9671752924067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3322443137424,0.242721043499027,0,0,0,0,0,0,24.0544702061977,0,0,0.211125408127993,19.1278068721027,3.31540698637377,0,0,0,0,0.0898683511473268,18.0811386422365,0,9.76569715805643,0,0,11.6319929531426,23.8414012275958,0,0,0,13.7749919332611,0.1137934482855,10.9329069625889,0,0,0,0,24.8007588027875,29.3049345859741,1.52581736317083,20.678321607139,1.47773809476774,24.132393686937,0,0,13.1584942041493,0,0,0,0,4.14701507651495,0.732780747214898,12.2597998484286,0,0,0,0,0,0,0,0,7.59593032300897,341.156569052619,0,0,2.98578579323551,11.4994833854341,0.611030144933625,0,0,0,19.3441251654543,0,3.98249557733077,0,20.9361142257336,0.728341138602278,0.789168805698781,0,0,52.318487932388,0,0,0,0.330991955875499,0,0,7.6844577428044,0,20.6536088618806,0.0979923974143777,0,1.22308667769421,0,0,0,0,8.43804443449249,0,58.0770503805968,0,0,0.886351143382302,0,0,0.426905989478705,0,0.144090417154106,0,0,0.288109595976299,0.124252535565433,0,0,0,2.44795722327172,0,7.80546375322726,46.8216395810616,0,0,0,9.49560164325664,2.97908551215189,249.101939528154,1.19807400299395,1.71690419254628,14.2829732762798,1.34366944973453,0,0,51.6817675935387,51.2626639130855,61.4046284511624,92.1281226978049,0,8.74752658790234,28.7389186895425,0,0,0,0,0,1.09349201984444,0,3.38864541386552,0.367182116944987,0,2.86859742932552,0,5.71756261098694,7.28301167401975,0,0,0,0,0,0,0,0.453248366080503,2256.90439864247,696.986235678284,10.342636508924,39.8020131245497,14.7134680580523,0.704815022316672,13.3484265709618,48.5761302757968,8.28478110694391,6.94632430536731,0,0,0,0,0.2506898940227,0.306345576763462,0.983617892129413,0,0.886068179966986,2.92863035764712,29.795441508147,84.8645609621305,62.5639850667847,15.5861971382872,0,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,2.76724691927833,8.89811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,1.35231848097497,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35610581599509,0.345430341731199,0,20.1857316781527,0,0,0,0,53.8242670170645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08300280463006,4.25089728976755,20.2735001002582,0.82046545696302,0,0.829887029570615,7.75083099032885,34.2646608621971,0,4.9547283806051,0,0,0,0,0,3.00841313397029,0,7.03362610109783,0,0,0,1.01306376927592,1.56215619722769,22.3221740221279,1.26831620387814,0.546974809018219,2.74128883428591,3.96968942711435,0,84.3232022421329,16.6067569122269,41.0266141106965,10.3184152720227,36.4259506162076,14.724593446998,0,220.53358013652,2.71878931907327,0.526182188502793,0,0.889851215136553,18.6028630055718,3.77077415798405,0,0,49.2314907978457,62.1077194253165,131.016505475811,0,6.04455411914251,0,0,3.10824246244555,0.85359238546975,5.53007729451273,4.73250094702305,0,0,0.84677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| |||
|short_description=p1@CP | |||
}} |
Latest revision as of 21:08, 15 September 2015
Short description: | p1@CP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000455472, ENST00000481169, ENST00000490639_5end |
EntrezGene: | CP |
HGNC: | 2295 |
UniProt: | D6RE86E9PFZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.67e-07 | 12 |