FFCP PHASE1:Mm9::chr11:80967207..80967221,-: Difference between revisions
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{{FFCP|EntrezGene=11418|HGNC=|MCL_coexpression_id=1|UniProt=Q925H0|association_with_transcript=-384bp_to_ENSMUST00000021045_5end|description=CAGE_peak_3_at_Accn1_5end|id=chr11:80967207..80967221,-|ontology_enrichment_celltype=CL:0000117!4.10e-15!23;CL:0000337!4.10e-15!23;CL:0000540!8.40e-15!33;CL:0000047!8.40e-15!33;CL:0000031!8.40e-15!33;CL:0000404!8.40e-15!33;CL:0000221!7.99e-11!44;CL:0000133!7.99e-11!44;CL:0002319!1.72e-10!43;CL:0000393!1.94e-10!39;CL:0000211!1.94e-10!39;CL:0000055!3.16e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-21,23;CL:0000337,1.58e-21,23;CL:0000540,5.65e-19,33;CL:0000047,5.65e-19,33;CL:0000031,5.65e-19,33;CL:0000404,5.65e-19,33;CL:0000393,3.65e-15,39;CL:0000211,3.65e-15,39;CL:0002319,3.17e-13,43;CL:0000221,8.51e-13,44;CL:0000133,8.51e-13,44;CL:0002612,7.05e-07,3;CL:0002613,8.01e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.79e-22!73;UBERON:0005743!3.79e-22!73;UBERON:0000073!5.38e-22!75;UBERON:0001016!5.38e-22!75;UBERON:0002346!8.05e-20!71;UBERON:0003075!8.05e-20!71;UBERON:0007284!8.05e-20!71;UBERON:0001049!1.09e-18!52;UBERON:0005068!1.09e-18!52;UBERON:0006241!1.09e-18!52;UBERON:0007135!1.09e-18!52;UBERON:0004121!3.03e-18!102;UBERON:0000924!3.03e-18!102;UBERON:0006601!3.03e-18!102;UBERON:0000955!1.45e-16!50;UBERON:0006238!1.45e-16!50;UBERON:0002020!6.01e-16!34;UBERON:0002616!6.17e-16!49;UBERON:0000033!9.03e-16!63;UBERON:0003080!8.67e-14!40;UBERON:0003056!1.39e-13!49;UBERON:0002780!1.76e-13!39;UBERON:0001890!1.76e-13!39;UBERON:0006240!1.76e-13!39;UBERON:0002791!4.22e-12!29;UBERON:0003528!4.22e-12!29;UBERON:0001893!4.22e-12!29;UBERON:0000956!4.72e-08!21;UBERON:0001869!4.72e-08!21;UBERON:0000203!4.72e-08!21;UBERON:0007811!6.90e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.00e-26,73;UBERON:0001016,1.87e-25,75;UBERON:0000073,3.73e-24,54;UBERON:0002020,5.63e-23,34;UBERON:0001049,6.04e-22,52;UBERON:0005068,6.04e-22,52;UBERON:0006241,6.04e-22,52;UBERON:0007135,6.04e-22,52;UBERON:0002346,2.29e-19,64;UBERON:0003075,2.29e-19,64;UBERON:0007284,2.29e-19,64;UBERON:0004121,5.13e-18,95;UBERON:0000924,5.13e-18,95;UBERON:0006601,5.13e-18,95;UBERON:0000955,7.74e-17,47;UBERON:0006238,7.74e-17,47;UBERON:0002780,3.33e-16,39;UBERON:0001890,3.33e-16,39;UBERON:0006240,3.33e-16,39;UBERON:0010371,5.96e-16,73;UBERON:0002616,9.77e-16,46;UBERON:0003080,1.19e-15,40;UBERON:0003528,2.18e-15,29;UBERON:0002791,2.18e-15,29;UBERON:0001893,2.18e-15,29;UBERON:0003056,1.04e-11,49;UBERON:0010314,5.60e-11,92;UBERON:0001948,1.73e-10,5;UBERON:0002315,1.73e-10,5;UBERON:0000956,1.03e-09,21;UBERON:0001869,1.03e-09,21;UBERON:0000203,1.03e-09,21;UBERON:0000474,5.45e-09,9;UBERON:0002240,1.25e-08,6;UBERON:0005174,1.25e-08,6;UBERON:0001137,1.25e-08,6;UBERON:0003134,8.23e-08,8;UBERON:0000025,2.59e-07,114;UBERON:0002420,3.33e-07,8;UBERON:0007245,3.33e-07,8;UBERON:0010009,3.33e-07,8;UBERON:0010011,3.33e-07,8;UBERON:0000454,3.33e-07,8;UBERON:0003100,3.91e-07,11;UBERON:0003076,4.89e-07,12;UBERON:0003057,4.89e-07,12;UBERON:0004111,5.65e-07,122;UBERON:0002257,7.05e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.65903379693564,1.21505344498522,2.3135745748652,4.57041575046086,3.75476519617743,0.61245399607477,0.766763768145891,0.919218786610021,1.10115880999389,1.65993539510744,0.768032666281217,3.42904348098504,2.65314166446988,5.2091337055676,0.558365998002762,1.12552522006336,1.06958773443767,4.12480019663135,3.70166370077668,3.35519002485541,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0,0.304465478312141,0,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.878342391034642,2.09446706813455,0,0,0,0,0.599162557619291,0.457500602818626,1.13088916901578,1.56441888173049,2.55715457330331,2.49345653471472,1.62241263067758,2.44414473240759,0.497627882440372,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.384341160854549,0.281105173679186,0.258703370739016,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,2.10289948564127,4.6307075570678,0,0,0.426576501070468,0.232236671860439,0,0,0,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0.814605311381257,0.775809948670503,1.19230893813542,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0.797273843287435,0,0,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,1.89304931649754,0.780877488593277,2.58508077279359,0,0,0.566153061577665,0,1.16902343164525,0.395287777946524,1.92792789853084,3.26462195979018,1.95872164033981,1.79175655288934,1.31976098378028,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0,0.535106452806212,1.48094118541909,1.522324745573,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.927126510052548,0,1.03193433981611,1.66675074632741,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0.299033092087958,0.165458490457098,0.972255941720238,0.516639293910924,0.844780627453891,0.704143431874524,0.39061315453185,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81523713176773,5.31139710375069,1.2862102744744,0,2.25900737046827,3.68260189205742,2.29158205375759,1.54667864109319,0,0.755393897389701,0.675022500231806,2.2516060161211,3.17199686288943,0,0.415149390336707,0.798049746802062,0,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.824140228955577,0.320919209591815,0,0.25347929989024,0.754505365544305,0.655490552289177,0.576226371643824,0.746661096422973,0,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0,0.70990322463735,0.238436189947321,0.872078499793971,0.752875043322645,0.25384382367503,0.914639864363863,0,0.271608227691724,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,0.619747364743864,0.771626443924566,1.24905288968973,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p3@Accn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11418 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q925H0 | |||
|association_with_transcript=-384bp_to_ENSMUST00000021045_5end | |||
|cluster_id=chr11:80967207..80967221,- | |||
|description=CAGE_peak_3_at_Accn1_5end | |||
|id=chr11:80967207..80967221,- | |||
|ontology_enrichment_celltype=CL:0000117!4.10e-15!23;CL:0000337!4.10e-15!23;CL:0000540!8.40e-15!33;CL:0000047!8.40e-15!33;CL:0000031!8.40e-15!33;CL:0000404!8.40e-15!33;CL:0000221!7.99e-11!44;CL:0000133!7.99e-11!44;CL:0002319!1.72e-10!43;CL:0000393!1.94e-10!39;CL:0000211!1.94e-10!39;CL:0000055!3.16e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-21,23;CL:0000337,1.58e-21,23;CL:0000540,5.65e-19,33;CL:0000047,5.65e-19,33;CL:0000031,5.65e-19,33;CL:0000404,5.65e-19,33;CL:0000393,3.65e-15,39;CL:0000211,3.65e-15,39;CL:0002319,3.17e-13,43;CL:0000221,8.51e-13,44;CL:0000133,8.51e-13,44;CL:0002612,7.05e-07,3;CL:0002613,8.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.79e-22!73;UBERON:0005743!3.79e-22!73;UBERON:0000073!5.38e-22!75;UBERON:0001016!5.38e-22!75;UBERON:0002346!8.05e-20!71;UBERON:0003075!8.05e-20!71;UBERON:0007284!8.05e-20!71;UBERON:0001049!1.09e-18!52;UBERON:0005068!1.09e-18!52;UBERON:0006241!1.09e-18!52;UBERON:0007135!1.09e-18!52;UBERON:0004121!3.03e-18!102;UBERON:0000924!3.03e-18!102;UBERON:0006601!3.03e-18!102;UBERON:0000955!1.45e-16!50;UBERON:0006238!1.45e-16!50;UBERON:0002020!6.01e-16!34;UBERON:0002616!6.17e-16!49;UBERON:0000033!9.03e-16!63;UBERON:0003080!8.67e-14!40;UBERON:0003056!1.39e-13!49;UBERON:0002780!1.76e-13!39;UBERON:0001890!1.76e-13!39;UBERON:0006240!1.76e-13!39;UBERON:0002791!4.22e-12!29;UBERON:0003528!4.22e-12!29;UBERON:0001893!4.22e-12!29;UBERON:0000956!4.72e-08!21;UBERON:0001869!4.72e-08!21;UBERON:0000203!4.72e-08!21;UBERON:0007811!6.90e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.00e-26,73;UBERON:0001016,1.87e-25,75;UBERON:0000073,3.73e-24,54;UBERON:0002020,5.63e-23,34;UBERON:0001049,6.04e-22,52;UBERON:0005068,6.04e-22,52;UBERON:0006241,6.04e-22,52;UBERON:0007135,6.04e-22,52;UBERON:0002346,2.29e-19,64;UBERON:0003075,2.29e-19,64;UBERON:0007284,2.29e-19,64;UBERON:0004121,5.13e-18,95;UBERON:0000924,5.13e-18,95;UBERON:0006601,5.13e-18,95;UBERON:0000955,7.74e-17,47;UBERON:0006238,7.74e-17,47;UBERON:0002780,3.33e-16,39;UBERON:0001890,3.33e-16,39;UBERON:0006240,3.33e-16,39;UBERON:0010371,5.96e-16,73;UBERON:0002616,9.77e-16,46;UBERON:0003080,1.19e-15,40;UBERON:0003528,2.18e-15,29;UBERON:0002791,2.18e-15,29;UBERON:0001893,2.18e-15,29;UBERON:0003056,1.04e-11,49;UBERON:0010314,5.60e-11,92;UBERON:0001948,1.73e-10,5;UBERON:0002315,1.73e-10,5;UBERON:0000956,1.03e-09,21;UBERON:0001869,1.03e-09,21;UBERON:0000203,1.03e-09,21;UBERON:0000474,5.45e-09,9;UBERON:0002240,1.25e-08,6;UBERON:0005174,1.25e-08,6;UBERON:0001137,1.25e-08,6;UBERON:0003134,8.23e-08,8;UBERON:0000025,2.59e-07,114;UBERON:0002420,3.33e-07,8;UBERON:0007245,3.33e-07,8;UBERON:0010009,3.33e-07,8;UBERON:0010011,3.33e-07,8;UBERON:0000454,3.33e-07,8;UBERON:0003100,3.91e-07,11;UBERON:0003076,4.89e-07,12;UBERON:0003057,4.89e-07,12;UBERON:0004111,5.65e-07,122;UBERON:0002257,7.05e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.65903379693564,1.21505344498522,2.3135745748652,4.57041575046086,3.75476519617743,0.61245399607477,0.766763768145891,0.919218786610021,1.10115880999389,1.65993539510744,0.768032666281217,3.42904348098504,2.65314166446988,5.2091337055676,0.558365998002762,1.12552522006336,1.06958773443767,4.12480019663135,3.70166370077668,3.35519002485541,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0,0.304465478312141,0,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.878342391034642,2.09446706813455,0,0,0,0,0.599162557619291,0.457500602818626,1.13088916901578,1.56441888173049,2.55715457330331,2.49345653471472,1.62241263067758,2.44414473240759,0.497627882440372,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.384341160854549,0.281105173679186,0.258703370739016,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,2.10289948564127,4.6307075570678,0,0,0.426576501070468,0.232236671860439,0,0,0,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0.814605311381257,0.775809948670503,1.19230893813542,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0.797273843287435,0,0,0,0,0,0,0,1.28440471990234,0.820481806145422,0,0,1.89304931649754,0.780877488593277,2.58508077279359,0,0,0.566153061577665,0,1.16902343164525,0.395287777946524,1.92792789853084,3.26462195979018,1.95872164033981,1.79175655288934,1.31976098378028,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0,0.535106452806212,1.48094118541909,1.522324745573,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.927126510052548,0,1.03193433981611,1.66675074632741,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0.299033092087958,0.165458490457098,0.972255941720238,0.516639293910924,0.844780627453891,0.704143431874524,0.39061315453185,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81523713176773,5.31139710375069,1.2862102744744,0,2.25900737046827,3.68260189205742,2.29158205375759,1.54667864109319,0,0.755393897389701,0.675022500231806,2.2516060161211,3.17199686288943,0,0.415149390336707,0.798049746802062,0,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.824140228955577,0.320919209591815,0,0.25347929989024,0.754505365544305,0.655490552289177,0.576226371643824,0.746661096422973,0,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0,0.70990322463735,0.238436189947321,0.872078499793971,0.752875043322645,0.25384382367503,0.914639864363863,0,0.271608227691724,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,0.619747364743864,0.771626443924566,1.24905288968973,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Accn1 | |||
}} |
Latest revision as of 19:23, 25 September 2015
Short description: | p3@Accn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Accn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -384bp_to_ENSMUST00000021045_5end |
EntrezGene: | Accn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.58e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.58e-21 | 23 |
neuron | 5.65e-19 | 33 |
neuronal stem cell | 5.65e-19 | 33 |
neuroblast | 5.65e-19 | 33 |
electrically signaling cell | 5.65e-19 | 33 |
electrically responsive cell | 3.65e-15 | 39 |
electrically active cell | 3.65e-15 | 39 |
neural cell | 3.17e-13 | 43 |
ectodermal cell | 8.51e-13 | 44 |
neurectodermal cell | 8.51e-13 | 44 |
neuron of the ventral spinal cord | 7.05e-07 | 3 |
striatum neuron | 8.01e-07 | 3 |