FFCP PHASE1:Hg19::chr3:120113197..120113217,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:120113197..120113217,- | |||
|coexpression_cluster_id=C1208 | |||
|description=CAGE_peak_at_chr3:120113197..120113217,- | |||
|id=chr3:120113197..120113217,- | |||
|ontology_enrichment_celltype=CL:0000055!7.75e-16!180;CL:0002620!1.73e-10!23;CL:0000057!6.03e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.75e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.85e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.12e-07;1!UBERON:0003852;5.12e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;2.22e-11;2!DOID:1192;1.95e-08;3!DOID:2513;5.12e-07;1!DOID:3369;5.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,1.90e-11,2;DOID:1192,1.85e-08,3;DOID:3369,5.13e-07,1;DOID:2513,5.75e-07,1;DOID:3571,8.97e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.12e-10;9!UBERON:0000042;8.12e-10;9!UBERON:0003688;8.49e-09;6!UBERON:0002358;8.49e-09;6!UBERON:0003684;8.49e-09;6!UBERON:0001178;8.49e-09;6!UBERON:0003104;2.02e-07;7!UBERON:0009142;2.02e-07;7!UBERON:0005705;5.12e-07;1!UBERON:0008193;5.12e-07;1!UBERON:0010912;5.12e-07;1!UBERON:0002514;5.12e-07;1!UBERON:0003457;5.12e-07;1!UBERON:0008907;5.12e-07;1!UBERON:0008001;5.12e-07;1!UBERON:0007213;5.12e-07;1!UBERON:0009891;5.12e-07;1!UBERON:0007914;5.12e-07;1!UBERON:0007375;5.12e-07;1!UBERON:0003323;5.12e-07;1!UBERON:0010258;5.12e-07;1!UBERON:0005253;5.12e-07;1!UBERON:0007842;5.12e-07;1!UBERON:0002397;5.12e-07;1!UBERON:0003113;5.12e-07;1!UBERON:0003277;5.12e-07;1!UBERON:0001709;5.12e-07;1!UBERON:0002244;5.12e-07;1!UBERON:0005620;5.12e-07;1!UBERON:0010364;5.12e-07;1!UBERON:0004288;5.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.21e-08,6;UBERON:0002358,1.21e-08,6;UBERON:0003684,1.21e-08,6;UBERON:0001178,1.21e-08,6;UBERON:0004457,2.45e-07,12;UBERON:0000042,2.45e-07,12;UBERON:0005705,4.85e-07,1;UBERON:0008193,4.85e-07,1;UBERON:0010912,4.85e-07,1;UBERON:0002514,4.85e-07,1;UBERON:0003457,4.85e-07,1;UBERON:0008907,4.85e-07,1;UBERON:0008001,4.85e-07,1;UBERON:0007213,4.85e-07,1;UBERON:0009891,4.85e-07,1;UBERON:0007914,4.85e-07,1;UBERON:0009292,4.85e-07,1;UBERON:0003099,4.85e-07,1;UBERON:0007375,4.85e-07,1;UBERON:0003323,4.85e-07,1;UBERON:0010258,4.85e-07,1;UBERON:0007842,4.85e-07,1;UBERON:0009494,4.85e-07,1;UBERON:0010042,4.85e-07,1;UBERON:0010045,4.85e-07,1;UBERON:0010259,4.85e-07,1;UBERON:0010359,4.85e-07,1;UBERON:0009526,4.85e-07,1;UBERON:0002397,4.85e-07,1;UBERON:0003113,4.85e-07,1;UBERON:0003277,4.85e-07,1;UBERON:0001709,4.85e-07,1;UBERON:0004066,4.85e-07,1;UBERON:0002244,4.85e-07,1;UBERON:0005620,4.85e-07,1;UBERON:0004362,4.85e-07,1;UBERON:0010364,4.85e-07,1;UBERON:0010046,4.85e-07,1;UBERON:0005868,4.85e-07,1;UBERON:0007238,4.85e-07,1;UBERON:0004288,4.85e-07,1;UBERON:0004068,4.85e-07,1;UBERON:0010334,4.85e-07,1;UBERON:0003852,4.85e-07,1;UBERON:0010253,4.85e-07,1;UBERON:0000989,8.49e-07,1;UBERON:0008811,8.49e-07,1;UBERON:0006258,8.49e-07,1;UBERON:0005876,8.49e-07,1;UBERON:0004874,8.49e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.986680828671798,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0.655324116390517,0,0.123766352960047,0.662794751455832,0,0,0,0,0.61560529038394,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,7.95166135246046,1.00267582127178,0.579386075843295,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.506522046658319,0,0.860509862246441,0,0.560677600142307,1.06748995729705,0,0,0,0,1.05950199351452,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0.741800787835671,0,0,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0,0.340296549480063,0.538168907066586,2.98980344345994,2.33125091275518,0.900273288253207,0.412210116953756,0.515281080091258,0.744467425326359,0.337552664482532,0.194874010322397,0.504867548488229,3.58994604704967,0.161646056818812,1.42003837006646,0.10075209822764,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0.531876233169741,0,0.257207374262142,0,0,1.00084595560703,1.08524321078289,0,0,0,0,0,0,0.399891964728228,0,0,0,0.958499421966331,0,1.42636905040718,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,1.42743191037729,2.68094105557689,0.234282829985426,0.601892199455438,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,1.66435439510497,0,1.24053903909388,0.61384789315225,0,4.74114852246094,2.55853624533352,0.64341568457443,0,0,0,0.574890092096664,0,0,0,0,0,0.68888668898764,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.214840489736547,0.290033387828457,0,0.267096106940212,0,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,1.73986598415015,0.37064843820784,0.143124886741991,0.744316738719335,0,0,0,0,0,0,1.07923474549989,0,0.117812402345686,0.606547444719948,0,0.842516912477962,0,0,0,1.22849920267187,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0.552567831062295,0,0,0,3.11039587661807,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.307801034015188,0.341826167541004,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,1.0319161948297,0,0,0,0,0,0,0,0.397429223405979,0,0,0.480952921509202,0,0,0,0,0,0,0,0,2.58217991539867,0.836822770498666,0.407992870545287,0,0,0.136905378891993,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0,0,0,0.268733889946905,1.80149941771202,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0.57785949122191,3.21662387062389,0,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,2.86203915588077,0,0,3.52675943690684,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,1.1441462864015,0,0,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0,0,0,1.98484471355718,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0.222462803784138,0.156986185701028,0,0,0.913158720509496,0.215927591218621,0.47775168788705,0.142953088353313,0,0,0.347716544605159,0,0,0.17071847709395,0,0,0.236664001461131,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.143339583151451,1.57771562193185,0,0,0.5290268405154,0,0.462175628631418,0.432626562123789,0.126166424835079,0,0,0.101988829741982,0.26721740526556,0,0,0,0.267964130156178,0,0,0.426467963801962,0.476128862927481,0,0,0.112131862580613,0.0636471582781649,0.404234377916439,0.435433495793923,0,0,0.430333232356058,0.665320713092027,0,0.213454691755431,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p@chr3:120113197..120113217,- | |||
}} |
Latest revision as of 14:52, 29 July 2015
Short description: | p@chr3:120113197..120113217, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:120113197..120113217, - |
Coexpression cluster: | C1208_Chondrocyte_Preadipocyte_Fibroblast_umbilical_Smooth_skin_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 1.90e-11 | 2 |
peripheral nervous system neoplasm | 1.85e-08 | 3 |
peripheral primitive neuroectodermal tumor | 5.13e-07 | 1 |
basal cell carcinoma | 5.75e-07 | 1 |
liver cancer | 8.97e-07 | 1 |