FFCP PHASE1:Hg19::chr3:112357199..112357228,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:112357199..112357228,+ | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_at_chr3:112357199..112357228,+ | |||
|id=chr3:112357199..112357228,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.64e-20!180;CL:0000680!2.30e-14!57;CL:0000056!2.30e-14!57;CL:0000355!2.30e-14!57;CL:0000057!2.11e-13!75;CL:0000187!4.36e-13!54;CL:0000183!2.27e-11!59;CL:0000393!2.46e-10!60;CL:0000211!2.46e-10!60;CL:0000192!1.90e-09!42;CL:0000514!1.90e-09!42;CL:0002334!3.22e-09!12;CL:0002620!1.10e-08!23;CL:0000222!5.95e-07!119;CL:0000359!5.98e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.36e-11;12!CL:0002620;1.66e-10;23!CL:0000136;1.63e-07;13!CL:1000306;2.69e-07;4!CL:0002547;2.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.51e-17,76;CL:0002334,1.35e-11,12;CL:0000048,1.32e-10,427;CL:0002620,2.69e-10,23;CL:0000723,4.06e-10,433;CL:0000136,6.47e-10,15;CL:0000034,1.71e-09,441;CL:1000306,2.81e-07,4;CL:0002547,2.81e-07,4;CL:0002320,3.30e-07,361;CL:0000134,6.44e-07,354;CL:0002570,7.99e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.21e-08;5!DOID:450;1.21e-08;5!DOID:66;1.21e-08;5!DOID:423;1.21e-08;5!DOID:0080000;1.21e-08;5!DOID:11722;1.21e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.67e-08,5;DOID:450,1.67e-08,5;DOID:66,1.67e-08,5;DOID:423,1.67e-08,5;DOID:0080000,1.67e-08,5;DOID:11722,1.67e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.16e-13!61;UBERON:0002036!2.16e-13!61;UBERON:0003082!2.16e-13!61;UBERON:0002385!2.86e-13!63;UBERON:0001015!2.86e-13!63;UBERON:0000383!2.86e-13!63;UBERON:0004290!5.93e-13!70;UBERON:0000486!7.50e-12!82;UBERON:0000914!2.81e-11!83;UBERON:0002329!2.81e-11!83;UBERON:0003077!2.81e-11!83;UBERON:0003059!2.81e-11!83;UBERON:0007282!2.81e-11!83;UBERON:0009618!2.81e-11!83;UBERON:0007285!2.81e-11!83;UBERON:0004872!5.92e-10!84;UBERON:0004923!1.46e-09!57;UBERON:0001013!1.44e-08!14;UBERON:0000948!8.01e-08!24;UBERON:0005498!8.01e-08!24;UBERON:0004140!8.01e-08!24;UBERON:0009881!8.01e-08!24;UBERON:0004141!8.01e-08!24;UBERON:0003084!8.01e-08!24;UBERON:0007005!8.01e-08!24;UBERON:0004139!8.01e-08!24;UBERON:0004291!8.01e-08!24;UBERON:0007100!5.46e-07!27;UBERON:0000490!7.72e-07!138;UBERON:0002199!7.77e-07!45;UBERON:0002416!7.77e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.99e-12;9!UBERON:0000042;4.99e-12;9!UBERON:0003688;1.39e-10;6!UBERON:0002358;1.39e-10;6!UBERON:0003684;1.39e-10;6!UBERON:0001178;1.39e-10;6!UBERON:0001013;8.44e-10;14!UBERON:0002384;1.99e-07;198!UBERON:0004797;2.69e-07;4!UBERON:0000415;2.69e-07;4!UBERON:0007240;2.69e-07;4!UBERON:0005742;2.69e-07;4!UBERON:0005734;2.69e-07;4!UBERON:0004664;2.69e-07;4!UBERON:0004663;2.69e-07;4!UBERON:0002199;3.70e-07;46!UBERON:0002416;3.70e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.14e-10,46;UBERON:0002416,1.14e-10,46;UBERON:0003688,1.42e-10,6;UBERON:0002358,1.42e-10,6;UBERON:0003684,1.42e-10,6;UBERON:0001178,1.42e-10,6;UBERON:0001013,4.43e-10,14;UBERON:0004457,1.65e-08,12;UBERON:0000042,1.65e-08,12;UBERON:0002384,3.28e-08,371;UBERON:0004872,7.14e-08,83;UBERON:0002097,7.54e-08,41;UBERON:0000415,2.81e-07,4;UBERON:0007240,2.81e-07,4;UBERON:0005742,2.81e-07,4;UBERON:0005734,2.81e-07,4;UBERON:0004664,2.81e-07,4;UBERON:0004663,2.81e-07,4 | |||
|phase1_expression=5.4503513781167,3.63970890614671,4.93340414335899,3.00219895059391,8.93922188854576,7.85104671690332,0,3.79031924056099,3.3954131665979,0.245733936501509,0,1.74753097704138,1.58260186937072,0.495065411840187,0.331397375727916,0,0,0.730310090387373,1.95173119516203,0.246242116153576,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,4.34732710268003,6.86734389530676,1.00267582127178,6.0835537963546,0,0.486634870302636,0.283604451492204,0.886917589850256,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,10.933382937297,3.03913227994991,3.17782033951725,27.8231522126349,2.83734705758686,3.36406560085384,0,2.71334303258876,1.24484414159907,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.794025282120147,6.09924761342131,3.20336083227851,4.02670612203168,9.30282397861647,1.23663035086127,4.12224864073007,1.11670113798954,4.55696097051419,0.974370051611986,5.3011092591264,3.03764665519588,1.13152239773168,11.005297368015,1.61203357164224,1.3564847384839,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,5.10804720835177,1.44375896333917,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.587043471179108,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0.43596006883328,0.66004457238855,0.904902010304444,3.57656445851882,2.535908257668,0.26593811658487,1.04007436911366,0.771622122786426,0,0.266422179016099,1.00084595560703,0.542621605391443,0,0.325736184293735,1.42156779497018,0,0.904318131178758,0,0.499864955910285,0,0,0,1.4377491329495,3.44585807502342,0,2.02693829334611,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,2.00068208423871,0.813795071099207,3.11956292296211,6.24501460790066,2.83864347061082,2.22568688486155,0.902838299183157,2.27407504055985,0,0,0,0.347534457872331,0,0,0,0,0,0.606255142892519,3.32870879020994,2.11673205330776,3.72161711728165,1.53461973288062,2.80660094433074,6.91951405980785,2.55853624533352,10.6163587954781,2.96836132889982,1.3878872442239,2.84098760501003,0.9033987161519,0.519254429183621,1.85936605535935,0,0,0,1.26295892981067,2.00300284807389,3.40923478894503,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.976135183992909,0,0.0915694648183434,0.165018999841176,0,0,4.82051789532479,0.386682873168488,0.308097234229289,0.921022048356777,0.551346289938122,0.644521469209642,0.725083469571143,0.340906509664404,2.04773681987496,0,0,0,0,4.18360994367557,16.3702420351933,0.6970372701606,1.23213432070436,1.06461206063404,0.869932992075073,1.29726953372744,0.143124886741991,0.372158369359667,0,1.14378116354295,0.255897791311334,0.42793898803392,0.318203247925937,0,0.719489830333259,1.09814811894422,0.235624804691373,0.202182481573316,0,0.421258456238981,0.975267478179181,1.94970791705028,2.11300293513511,1.50149902548784,1.83827061539827,1.13008116620243,0,0,1.75380354101505,0.578775534266688,0,0,0.6196469961995,0.563391205064483,1.72093622644862,1.47373561519682,1.07001315444375,0.354761064070598,6.12212142363226,9.87884678879706,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0,0.445234820091624,0,0,0.796991953004279,0,0,0,0,2.48831670129446,0,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.230850775511391,0,0,0.179515288819544,0.217294743844016,0,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0,0,0,0,0,0,2.40773294189637,0,0,0,0,1.97292201424695,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0.34945333648406,0.171986032471617,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0.400794101257669,0,0.19980960958213,0,0,0,0,0.372757606696298,0,0,0.104602846312333,0.509991088181609,0,0,0,0,0,0,1.67569440763353,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,2.88239906833923,1.16495949527454,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0.191915197319445,0.714695326373367,1.32418394073086,0,1.08599920350743,2.5926644736038,3.26587360109409,0,0,2.04465626142506,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p@chr3:112357199..112357228,+ | |||
}} |
Latest revision as of 14:18, 29 July 2015
Short description: | p@chr3:112357199..112357228, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112357199..112357228, + |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.51e-17 | 76 |
preadipocyte | 1.35e-11 | 12 |
multi fate stem cell | 1.32e-10 | 427 |
skin fibroblast | 2.69e-10 | 23 |
somatic stem cell | 4.06e-10 | 433 |
fat cell | 6.47e-10 | 15 |
stem cell | 1.71e-09 | 441 |
fibroblast of tunica adventitia of artery | 2.81e-07 | 4 |
fibroblast of the aortic adventitia | 2.81e-07 | 4 |
connective tissue cell | 3.30e-07 | 361 |
mesenchymal cell | 6.44e-07 | 354 |
mesenchymal stem cell of adipose | 7.99e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
integument | 1.14e-10 | 46 |
integumental system | 1.14e-10 | 46 |
omentum | 1.42e-10 | 6 |
peritoneum | 1.42e-10 | 6 |
abdominal cavity | 1.42e-10 | 6 |
visceral peritoneum | 1.42e-10 | 6 |
adipose tissue | 4.43e-10 | 14 |
cavity lining | 1.65e-08 | 12 |
serous membrane | 1.65e-08 | 12 |
connective tissue | 3.28e-08 | 371 |
splanchnic layer of lateral plate mesoderm | 7.14e-08 | 83 |
skin of body | 7.54e-08 | 41 |
artery wall | 2.81e-07 | 4 |
tunica adventitia of artery | 2.81e-07 | 4 |
adventitia | 2.81e-07 | 4 |
tunica adventitia of blood vessel | 2.81e-07 | 4 |
aorta tunica adventitia | 2.81e-07 | 4 |
aorta wall | 2.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.67e-08 | 5 |
myotonic disease | 1.67e-08 | 5 |
muscle tissue disease | 1.67e-08 | 5 |
myopathy | 1.67e-08 | 5 |
muscular disease | 1.67e-08 | 5 |
myotonic dystrophy | 1.67e-08 | 5 |