FFCP PHASE1:Mm9::chr11:54063142..54063146,-: Difference between revisions
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{{FFCP|EntrezGene=12981|HGNC=|UniProt=P01587|association_with_transcript=22bp_to_ENSMUST00000019060_5end|description=CAGE_peak_1_at_Csf2_5end|id=chr11:54063142..54063146,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,7.63e-12,3;CL:0002202,7.63e-12,3;CL:0000069,7.63e-12,3;CL:0002632,7.63e-12,3;CL:0002368,7.63e-12,3;CL:0000307,7.63e-12,3;CL:0000377,7.63e-12,3;CL:0000682,2.78e-11,3;CL:0000893,2.04e-10,6;CL:0002489,2.04e-10,6;CL:0000898,2.04e-10,6;CL:0000809,2.04e-10,6;CL:0000810,2.04e-10,6;CL:0000895,2.04e-10,6;CL:0000808,2.04e-10,6;CL:0000894,2.04e-10,6;CL:0000806,2.04e-10,6;CL:0000807,2.04e-10,6;CL:0000805,2.04e-10,6;CL:0002425,2.04e-10,6;CL:0002436,2.04e-10,6;CL:0002427,2.04e-10,6;CL:0002428,2.04e-10,6;CL:0002429,2.04e-10,6;CL:0002433,2.04e-10,6;CL:0002431,2.04e-10,6;CL:0002432,2.04e-10,6;CL:0000066,3.81e-10,25;CL:0002076,4.46e-08,15;CL:0000624,8.18e-08,8;CL:0000791,6.06e-07,9;CL:0000789,6.06e-07,9;CL:0002420,6.06e-07,9;CL:0002419,6.06e-07,9;CL:0000790,6.06e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!9.85e-16!41;UBERON:0001004!4.07e-15!42;UBERON:0005178!5.57e-11!17;UBERON:0005181!5.57e-11!17;UBERON:0002224!5.57e-11!17;UBERON:0000915!5.57e-11!17;UBERON:0008947!5.57e-11!17;UBERON:0003258!5.57e-11!17;UBERON:0001007!8.72e-11!128;UBERON:0001555!8.72e-11!128;UBERON:0007026!8.72e-11!128;UBERON:0004119!2.28e-10!130;UBERON:0000925!2.28e-10!130;UBERON:0006595!2.28e-10!130;UBERON:0004921!8.11e-10!126;UBERON:0004185!8.11e-10!126;UBERON:0000072!5.27e-09!27;UBERON:0002048!6.25e-08!14;UBERON:0000117!6.25e-08!14;UBERON:0000171!6.25e-08!14;UBERON:0000170!6.25e-08!14;UBERON:0005597!6.25e-08!14;UBERON:0000118!6.25e-08!14;UBERON:0002370!5.50e-07!23;UBERON:0000974!5.50e-07!23;UBERON:0004807!5.50e-07!23;UBERON:0005058!5.50e-07!23;UBERON:0003351!5.50e-07!23;UBERON:0009113!5.50e-07!23;UBERON:0003295!5.50e-07!23;UBERON:0009722!5.50e-07!23;UBERON:0005562!5.50e-07!23;UBERON:0007690!5.50e-07!23;UBERON:0005911!7.48e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.88e-27,17;UBERON:0005181,6.88e-27,17;UBERON:0002224,6.88e-27,17;UBERON:0000915,6.88e-27,17;UBERON:0008947,6.88e-27,17;UBERON:0003258,6.88e-27,17;UBERON:0000065,1.77e-21,41;UBERON:0001004,6.88e-21,42;UBERON:0002048,6.59e-18,14;UBERON:0000117,6.59e-18,14;UBERON:0000171,6.59e-18,14;UBERON:0000170,6.59e-18,14;UBERON:0005597,6.59e-18,14;UBERON:0000118,6.59e-18,14;UBERON:0005153,1.67e-14,17;UBERON:0005157,4.05e-12,20;UBERON:0003126,7.63e-12,3;UBERON:0001005,7.63e-12,3;UBERON:0007196,7.63e-12,3;UBERON:0001558,7.63e-12,3;UBERON:0005911,3.42e-11,69;UBERON:0001041,2.19e-09,80;UBERON:0004921,1.66e-08,114;UBERON:0001007,2.72e-08,116;UBERON:0001555,2.72e-08,116;UBERON:0007026,2.72e-08,116;UBERON:0004119,4.38e-08,118;UBERON:0000925,4.38e-08,118;UBERON:0006595,4.38e-08,118;UBERON:0000072,1.30e-07,27|phase1_expression=0,7.32848356042658,4.54999239389536,0.30246421130683,0,0.671517087647559,1.16806320297763,0,55.4707565277567,57.5798734752104,47.4273771984649,22.5755209956802,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0.319984845586813,0.68822784320151,6.89078356938024,6.03066794622705,3.44753972297422,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.202753862439029,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2842636132441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5459428393233,23.055747758234,26.2872711407687,0,0.517875767294343,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0.169745085775188,0,0.167506257441816,2.61848004974615,1.36593553500459,1.41871629695572,1.32878813789265,1.2756381492599,2.13022309130459,2.24490476425664,2.60368305446721,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.839708713941948,1.24379976423981,0,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0,0.120195449519969,0.590758108698309,1.21159739937777,0.762068066549998,0.705783295957884,0.877120926657772,0.384847366561318,0.233753804363138,0,0,0,0.167884616364078,0,0.375364950902364,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.464810523557898,0,0,0,0,0,0,0|short_description=p1@Csf2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12981 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P01587 | |||
|association_with_transcript=22bp_to_ENSMUST00000019060_5end | |||
|cluster_id=chr11:54063142..54063146,- | |||
|description=CAGE_peak_1_at_Csf2_5end | |||
|id=chr11:54063142..54063146,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.63e-12,3;CL:0002202,7.63e-12,3;CL:0000069,7.63e-12,3;CL:0002632,7.63e-12,3;CL:0002368,7.63e-12,3;CL:0000307,7.63e-12,3;CL:0000377,7.63e-12,3;CL:0000682,2.78e-11,3;CL:0000893,2.04e-10,6;CL:0002489,2.04e-10,6;CL:0000898,2.04e-10,6;CL:0000809,2.04e-10,6;CL:0000810,2.04e-10,6;CL:0000895,2.04e-10,6;CL:0000808,2.04e-10,6;CL:0000894,2.04e-10,6;CL:0000806,2.04e-10,6;CL:0000807,2.04e-10,6;CL:0000805,2.04e-10,6;CL:0002425,2.04e-10,6;CL:0002436,2.04e-10,6;CL:0002427,2.04e-10,6;CL:0002428,2.04e-10,6;CL:0002429,2.04e-10,6;CL:0002433,2.04e-10,6;CL:0002431,2.04e-10,6;CL:0002432,2.04e-10,6;CL:0000066,3.81e-10,25;CL:0002076,4.46e-08,15;CL:0000624,8.18e-08,8;CL:0000791,6.06e-07,9;CL:0000789,6.06e-07,9;CL:0002420,6.06e-07,9;CL:0002419,6.06e-07,9;CL:0000790,6.06e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!9.85e-16!41;UBERON:0001004!4.07e-15!42;UBERON:0005178!5.57e-11!17;UBERON:0005181!5.57e-11!17;UBERON:0002224!5.57e-11!17;UBERON:0000915!5.57e-11!17;UBERON:0008947!5.57e-11!17;UBERON:0003258!5.57e-11!17;UBERON:0001007!8.72e-11!128;UBERON:0001555!8.72e-11!128;UBERON:0007026!8.72e-11!128;UBERON:0004119!2.28e-10!130;UBERON:0000925!2.28e-10!130;UBERON:0006595!2.28e-10!130;UBERON:0004921!8.11e-10!126;UBERON:0004185!8.11e-10!126;UBERON:0000072!5.27e-09!27;UBERON:0002048!6.25e-08!14;UBERON:0000117!6.25e-08!14;UBERON:0000171!6.25e-08!14;UBERON:0000170!6.25e-08!14;UBERON:0005597!6.25e-08!14;UBERON:0000118!6.25e-08!14;UBERON:0002370!5.50e-07!23;UBERON:0000974!5.50e-07!23;UBERON:0004807!5.50e-07!23;UBERON:0005058!5.50e-07!23;UBERON:0003351!5.50e-07!23;UBERON:0009113!5.50e-07!23;UBERON:0003295!5.50e-07!23;UBERON:0009722!5.50e-07!23;UBERON:0005562!5.50e-07!23;UBERON:0007690!5.50e-07!23;UBERON:0005911!7.48e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.88e-27,17;UBERON:0005181,6.88e-27,17;UBERON:0002224,6.88e-27,17;UBERON:0000915,6.88e-27,17;UBERON:0008947,6.88e-27,17;UBERON:0003258,6.88e-27,17;UBERON:0000065,1.77e-21,41;UBERON:0001004,6.88e-21,42;UBERON:0002048,6.59e-18,14;UBERON:0000117,6.59e-18,14;UBERON:0000171,6.59e-18,14;UBERON:0000170,6.59e-18,14;UBERON:0005597,6.59e-18,14;UBERON:0000118,6.59e-18,14;UBERON:0005153,1.67e-14,17;UBERON:0005157,4.05e-12,20;UBERON:0003126,7.63e-12,3;UBERON:0001005,7.63e-12,3;UBERON:0007196,7.63e-12,3;UBERON:0001558,7.63e-12,3;UBERON:0005911,3.42e-11,69;UBERON:0001041,2.19e-09,80;UBERON:0004921,1.66e-08,114;UBERON:0001007,2.72e-08,116;UBERON:0001555,2.72e-08,116;UBERON:0007026,2.72e-08,116;UBERON:0004119,4.38e-08,118;UBERON:0000925,4.38e-08,118;UBERON:0006595,4.38e-08,118;UBERON:0000072,1.30e-07,27 | |||
|phase1_expression=0,7.32848356042658,4.54999239389536,0.30246421130683,0,0.671517087647559,1.16806320297763,0,55.4707565277567,57.5798734752104,47.4273771984649,22.5755209956802,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0.319984845586813,0.68822784320151,6.89078356938024,6.03066794622705,3.44753972297422,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.202753862439029,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.2842636132441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5459428393233,23.055747758234,26.2872711407687,0,0.517875767294343,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0.169745085775188,0,0.167506257441816,2.61848004974615,1.36593553500459,1.41871629695572,1.32878813789265,1.2756381492599,2.13022309130459,2.24490476425664,2.60368305446721,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.839708713941948,1.24379976423981,0,0,0,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0.129920822977795,0.358053391334963,0,0.120195449519969,0.590758108698309,1.21159739937777,0.762068066549998,0.705783295957884,0.877120926657772,0.384847366561318,0.233753804363138,0,0,0,0.167884616364078,0,0.375364950902364,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.464810523557898,0,0,0,0,0,0,0 | |||
|short_description=p1@Csf2 | |||
}} |
Latest revision as of 16:51, 1 October 2015
Short description: | p1@Csf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Csf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENSMUST00000019060_5end |
EntrezGene: | Csf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 6.88e-27 | 17 |
thoracic segment organ | 6.88e-27 | 17 |
thoracic cavity | 6.88e-27 | 17 |
thoracic segment of trunk | 6.88e-27 | 17 |
respiratory primordium | 6.88e-27 | 17 |
endoderm of foregut | 6.88e-27 | 17 |
respiratory tract | 1.77e-21 | 41 |
respiratory system | 6.88e-21 | 42 |
lung | 6.59e-18 | 14 |
respiratory tube | 6.59e-18 | 14 |
respiration organ | 6.59e-18 | 14 |
pair of lungs | 6.59e-18 | 14 |
lung primordium | 6.59e-18 | 14 |
lung bud | 6.59e-18 | 14 |
epithelial bud | 1.67e-14 | 17 |
epithelial fold | 4.05e-12 | 20 |
trachea | 7.63e-12 | 3 |
respiratory airway | 7.63e-12 | 3 |
tracheobronchial tree | 7.63e-12 | 3 |
lower respiratory tract | 7.63e-12 | 3 |
endo-epithelium | 3.42e-11 | 69 |
foregut | 2.19e-09 | 80 |
subdivision of digestive tract | 1.66e-08 | 114 |
digestive system | 2.72e-08 | 116 |
digestive tract | 2.72e-08 | 116 |
primitive gut | 2.72e-08 | 116 |
endoderm-derived structure | 4.38e-08 | 118 |
endoderm | 4.38e-08 | 118 |
presumptive endoderm | 4.38e-08 | 118 |
segment of respiratory tract | 1.30e-07 | 27 |